RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
PDE4D-220ENST00000512069 ITPKCQ96DU7 683 aa9.85□□□□□ -0.83
PDE4D-220ENST00000512069 ZFAND3Q9H8U3 227 aa9.85□□□□□ -0.83
PDE4D-220ENST00000512069 TBC1D2BQ9UPU7 963 aa9.85□□□□□ -0.83
PDE4D-220ENST00000512069 ZIC2O95409 532 aaPredicted RBP9.84□□□□□ -0.83
PDE4D-220ENST00000512069 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
PDE4D-220ENST00000512069 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
PDE4D-220ENST00000512069 FBXO45P0C2W1 286 aa9.83□□□□□ -0.84
PDE4D-220ENST00000512069 NR1H3Q13133 447 aa9.83□□□□□ -0.84
PDE4D-220ENST00000512069 KCTD15Q96SI1 283 aaPredicted RBP9.83□□□□□ -0.84
PDE4D-220ENST00000512069 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
PDE4D-220ENST00000512069 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
PDE4D-220ENST00000512069 GDPD2Q9HCC8 539 aa9.82□□□□□ -0.84
PDE4D-220ENST00000512069 MCCD1P59942 119 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-220ENST00000512069 IRF5Q13568 498 aa9.81□□□□□ -0.84
PDE4D-220ENST00000512069 ZNF775Q96BV0 537 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-220ENST00000512069 COG6Q9Y2V7 657 aa9.81□□□□□ -0.84
PDE4D-220ENST00000512069 DZIP3Q86Y13 1208 aaKnown RBP9.8□□□□□ -0.84
PDE4D-220ENST00000512069 CCDC116Q8IYX3 515 aa9.8□□□□□ -0.84
PDE4D-220ENST00000512069 RAB15P59190 212 aa9.79□□□□□ -0.84
PDE4D-220ENST00000512069 TRIM47Q96LD4 638 aa9.79□□□□□ -0.84
PDE4D-220ENST00000512069 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
PDE4D-220ENST00000512069 ZNF330Q9Y3S2 320 aaPredicted RBP9.79□□□□□ -0.84
PDE4D-220ENST00000512069 PPP1R26Q5T8A7 1209 aaPredicted RBP9.78□□□□□ -0.84
PDE4D-220ENST00000512069 MRPL14Q6P1L8 145 aaKnown RBP9.78□□□□□ -0.84
PDE4D-220ENST00000512069 ZNF592Q92610 1267 aa9.78□□□□□ -0.84
PDE4D-220ENST00000512069 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
PDE4D-220ENST00000512069 RAD21O60216 631 aa9.77□□□□□ -0.85
PDE4D-220ENST00000512069 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
PDE4D-220ENST00000512069 ABL2P42684 1182 aa9.77□□□□□ -0.85
PDE4D-220ENST00000512069 WASHC4Q2M389 1173 aa9.77□□□□□ -0.85
PDE4D-220ENST00000512069 INTS6LQ5JSJ4 861 aaKnown RBP9.77□□□□□ -0.85
PDE4D-220ENST00000512069 PURBQ96QR8 312 aaKnown RBP9.77□□□□□ -0.85
PDE4D-220ENST00000512069 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
PDE4D-220ENST00000512069 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
PDE4D-220ENST00000512069 PCDHB9Q9Y5E1 797 aa9.76□□□□□ -0.85
PDE4D-220ENST00000512069 ESPNB1AK53 854 aa9.75□□□□□ -0.85
PDE4D-220ENST00000512069 NBPF20Q3BBV1 942 aa9.75□□□□□ -0.85
PDE4D-220ENST00000512069 C6orf118Q5T5N4 469 aa9.75□□□□□ -0.85
PDE4D-220ENST00000512069 TMPRSS4Q9NRS4 437 aa9.75□□□□□ -0.85
PDE4D-220ENST00000512069 CBLBQ13191 982 aa9.74□□□□□ -0.85
PDE4D-220ENST00000512069 SCARF1Q14162 830 aa9.74□□□□□ -0.85
PDE4D-220ENST00000512069 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
PDE4D-220ENST00000512069 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
PDE4D-220ENST00000512069 GIGYF1O75420 1035 aaPredicted RBP9.73□□□□□ -0.85
PDE4D-220ENST00000512069 EIF4G2P78344 907 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDE4D-220ENST00000512069 CCDC125Q86Z20 511 aa9.73□□□□□ -0.85
PDE4D-220ENST00000512069 WWC1Q8IX03 1113 aa9.73□□□□□ -0.85
PDE4D-220ENST00000512069 ERVH48-1M5A8F1 160 aa9.72□□□□□ -0.85
PDE4D-220ENST00000512069 DHX9Q08211 1270 aaKnown RBP9.72□□□□□ -0.85
PDE4D-220ENST00000512069 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
PDE4D-220ENST00000512069 MEIOBQ8N635 442 aa9.72□□□□□ -0.85
PDE4D-220ENST00000512069 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
PDE4D-220ENST00000512069 BMP2P12643 396 aa9.71□□□□□ -0.86
PDE4D-220ENST00000512069 VAC14Q08AM6 782 aa9.71□□□□□ -0.86
PDE4D-220ENST00000512069 SOBPA7XYQ1 873 aa9.7□□□□□ -0.86
PDE4D-220ENST00000512069 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
PDE4D-220ENST00000512069 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
PDE4D-220ENST00000512069 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
PDE4D-220ENST00000512069 A6NJR5 290 aa9.69□□□□□ -0.86
PDE4D-220ENST00000512069 UPP2O95045 317 aa9.69□□□□□ -0.86
PDE4D-220ENST00000512069 SOX11P35716 441 aa9.69□□□□□ -0.86
PDE4D-220ENST00000512069 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
PDE4D-220ENST00000512069 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
PDE4D-220ENST00000512069 Q6ZVU0 165 aa9.68□□□□□ -0.86
PDE4D-220ENST00000512069 FNBP4Q8N3X1 1017 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-220ENST00000512069 CLUAP1Q96AJ1 413 aa9.68□□□□□ -0.86
PDE4D-220ENST00000512069 TSEN34Q9BSV6 310 aaKnown RBP9.68□□□□□ -0.86
PDE4D-220ENST00000512069 ADD1P35611 737 aaKnown RBP9.67□□□□□ -0.86
PDE4D-220ENST00000512069 LILRA1O75019 489 aa9.66□□□□□ -0.86
PDE4D-220ENST00000512069 RELBQ01201 579 aa9.66□□□□□ -0.86
PDE4D-220ENST00000512069 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
PDE4D-220ENST00000512069 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
PDE4D-220ENST00000512069 PHTF2Q8N3S3 785 aa9.65□□□□□ -0.86
PDE4D-220ENST00000512069 ALG2Q9H553 416 aa9.65□□□□□ -0.86
PDE4D-220ENST00000512069 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
PDE4D-220ENST00000512069 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
PDE4D-220ENST00000512069 PROSER2Q86WR7 435 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-220ENST00000512069 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-220ENST00000512069 MAN1A2O60476 641 aa9.63□□□□□ -0.87
PDE4D-220ENST00000512069 SOS2Q07890 1332 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-220ENST00000512069 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
PDE4D-220ENST00000512069 TERTO14746 1132 aaKnown RBP9.62□□□□□ -0.87
PDE4D-220ENST00000512069 VEGFBP49765 207 aa9.62□□□□□ -0.87
PDE4D-220ENST00000512069 NFX1Q12986 1120 aaKnown RBP9.62□□□□□ -0.87
PDE4D-220ENST00000512069 KDF1Q8NAX2 398 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-220ENST00000512069 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
PDE4D-220ENST00000512069 SPINT1O43278 529 aa9.61□□□□□ -0.87
PDE4D-220ENST00000512069 INSM2Q96T92 566 aaPredicted RBP9.61□□□□□ -0.87
PDE4D-220ENST00000512069 DNMT3LQ9UJW3 386 aa9.61□□□□□ -0.87
PDE4D-220ENST00000512069 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
PDE4D-220ENST00000512069 POM121CA8CG34 1229 aa9.6□□□□□ -0.87
PDE4D-220ENST00000512069 WFS1O76024 890 aa9.6□□□□□ -0.87
PDE4D-220ENST00000512069 ADH1AP07327 375 aa9.6□□□□□ -0.87
PDE4D-220ENST00000512069 SLFNL1Q499Z3 407 aa9.6□□□□□ -0.87
PDE4D-220ENST00000512069 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
PDE4D-220ENST00000512069 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
PDE4D-220ENST00000512069 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
PDE4D-220ENST00000512069 CTSOP43234 321 aaPredicted RBP9.59□□□□□ -0.87
PDE4D-220ENST00000512069 SCTRP47872 440 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms