RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
HTT-209ENST00000512068 G3V3G9 751 aa10.87□□□□□ -0.67
HTT-209ENST00000512068 MFSD10Q14728 455 aa10.87□□□□□ -0.67
HTT-209ENST00000512068 FAM9BQ8IZU0 186 aa10.87□□□□□ -0.67
HTT-209ENST00000512068 ROBO2Q9HCK4 1378 aa10.87□□□□□ -0.67
HTT-209ENST00000512068 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
HTT-209ENST00000512068 ADGRB2O60241 1585 aa10.86□□□□□ -0.67
HTT-209ENST00000512068 LARP6Q9BRS8 491 aaKnown RBP10.86□□□□□ -0.67
HTT-209ENST00000512068 NSD2O96028 1365 aa10.86□□□□□ -0.67
HTT-209ENST00000512068 ITSN1Q15811 1721 aa10.86□□□□□ -0.67
HTT-209ENST00000512068 CHD2O14647 1828 aaKnown RBP10.86□□□□□ -0.67
HTT-209ENST00000512068 PTPRUQ92729 1446 aa10.85□□□□□ -0.67
HTT-209ENST00000512068 MORC1Q86VD1 984 aa10.85□□□□□ -0.67
HTT-209ENST00000512068 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
HTT-209ENST00000512068 ATP7BP35670 1465 aa10.85□□□□□ -0.67
HTT-209ENST00000512068 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.67
HTT-209ENST00000512068 A0A1W2PP64 1363 aa10.84□□□□□ -0.67
HTT-209ENST00000512068 PPIP5K1Q6PFW1 1433 aa10.84□□□□□ -0.67
HTT-209ENST00000512068 CABP1Q9NZU7 370 aa10.83□□□□□ -0.68
HTT-209ENST00000512068 KIF20BQ96Q89 1820 aa10.83□□□□□ -0.68
HTT-209ENST00000512068 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.83□□□□□ -0.68
HTT-209ENST00000512068 CCDC184Q52MB2 194 aa10.82□□□□□ -0.68
HTT-209ENST00000512068 C14orf37Q86TY3 774 aa10.82□□□□□ -0.68
HTT-209ENST00000512068 NUDT16Q96DE0 195 aaKnown RBP10.82□□□□□ -0.68
HTT-209ENST00000512068 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
HTT-209ENST00000512068 CARD14Q9BXL6 1004 aa10.82□□□□□ -0.68
HTT-209ENST00000512068 ANKRD26Q9UPS8 1709 aa10.81□□□□□ -0.68
HTT-209ENST00000512068 KCNA6P17658 529 aa10.81□□□□□ -0.68
HTT-209ENST00000512068 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
HTT-209ENST00000512068 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
HTT-209ENST00000512068 CDC42BPGQ6DT37 1551 aa10.81□□□□□ -0.68
HTT-209ENST00000512068 E2F4Q16254 413 aa10.8□□□□□ -0.68
HTT-209ENST00000512068 KCNV2Q8TDN2 545 aa10.8□□□□□ -0.68
HTT-209ENST00000512068 AKAP12Q02952 1782 aa10.8□□□□□ -0.68
HTT-209ENST00000512068 TOPAZ1Q8N9V7 1692 aa10.79□□□□□ -0.68
HTT-209ENST00000512068 EDC4Q6P2E9 1401 aaKnown RBP10.79□□□□□ -0.68
HTT-209ENST00000512068 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
HTT-209ENST00000512068 KIF3CO14782 793 aa10.79□□□□□ -0.68
HTT-209ENST00000512068 TMC2Q8TDI7 906 aa10.79□□□□□ -0.68
HTT-209ENST00000512068 CFAP53Q96M91 514 aa10.79□□□□□ -0.68
HTT-209ENST00000512068 MON2Q7Z3U7 1717 aa10.78□□□□□ -0.68
HTT-209ENST00000512068 NWD1Q149M9 1564 aa10.78□□□□□ -0.68
HTT-209ENST00000512068 ANKARQ7Z5J8 1434 aa10.78□□□□□ -0.68
HTT-209ENST00000512068 NUTM2FA1L443 756 aa10.78□□□□□ -0.68
HTT-209ENST00000512068 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
HTT-209ENST00000512068 FMN2Q9NZ56 1722 aa10.78□□□□□ -0.68
HTT-209ENST00000512068 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.69
HTT-209ENST00000512068 CD163L1Q9NR16 1453 aa10.77□□□□□ -0.69
HTT-209ENST00000512068 TNNT2P45379 298 aaPredicted RBP10.77□□□□□ -0.69
HTT-209ENST00000512068 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
HTT-209ENST00000512068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.77□□□□□ -0.69
HTT-209ENST00000512068 NALCNQ8IZF0 1738 aa10.77□□□□□ -0.69
HTT-209ENST00000512068 FOXK1P85037 733 aa10.76□□□□□ -0.69
HTT-209ENST00000512068 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
HTT-209ENST00000512068 NBR1Q14596 966 aa10.76□□□□□ -0.69
HTT-209ENST00000512068 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
HTT-209ENST00000512068 NGDNQ8NEJ9 315 aaKnown RBP10.76□□□□□ -0.69
HTT-209ENST00000512068 GGNBP2Q9H3C7 697 aa10.76□□□□□ -0.69
HTT-209ENST00000512068 ADGRL3Q9HAR2 1447 aa10.75□□□□□ -0.69
HTT-209ENST00000512068 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
HTT-209ENST00000512068 HSPA2P54652 639 aa10.75□□□□□ -0.69
HTT-209ENST00000512068 DSG2Q14126 1118 aa10.75□□□□□ -0.69
HTT-209ENST00000512068 ARHGEF1Q92888 912 aaKnown RBP10.75□□□□□ -0.69
HTT-209ENST00000512068 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
HTT-209ENST00000512068 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
HTT-209ENST00000512068 CPSF1Q10570 1443 aaKnown RBP10.75□□□□□ -0.69
HTT-209ENST00000512068 LMTK3Q96Q04 1460 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 PLEKHG3A1L390 1219 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 COG3Q96JB2 828 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 ACEP12821 1306 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 PRR36Q9H6K5 1346 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 INSRP06213 1382 aa10.74□□□□□ -0.69
HTT-209ENST00000512068 FYB1O15117 783 aa10.73□□□□□ -0.69
HTT-209ENST00000512068 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
HTT-209ENST00000512068 ARIH1Q9Y4X5 557 aaPredicted RBP10.73□□□□□ -0.69
HTT-209ENST00000512068 POLR3AO14802 1390 aaPredicted RBP10.73□□□□□ -0.69
HTT-209ENST00000512068 PMFBP1Q8TBY8 1022 aa10.72□□□□□ -0.69
HTT-209ENST00000512068 NUDCQ9Y266 331 aa10.72□□□□□ -0.69
HTT-209ENST00000512068 USP6P35125 1406 aa10.72□□□□□ -0.69
HTT-209ENST00000512068 MTHFSP49914 203 aa10.71□□□□□ -0.69
HTT-209ENST00000512068 NRKQ7Z2Y5 1582 aa10.71□□□□□ -0.69
HTT-209ENST00000512068 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.69
HTT-209ENST00000512068 BLMP54132 1417 aaPredicted RBP10.7□□□□□ -0.7
HTT-209ENST00000512068 TTC21BQ7Z4L5 1316 aa10.7□□□□□ -0.7
HTT-209ENST00000512068 ATF3P18847 181 aa10.7□□□□□ -0.7
HTT-209ENST00000512068 PLPP6Q8IY26 295 aa10.7□□□□□ -0.7
HTT-209ENST00000512068 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
HTT-209ENST00000512068 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
HTT-209ENST00000512068 NCOA3Q9Y6Q9 1424 aa10.69□□□□□ -0.7
HTT-209ENST00000512068 ESCO1Q5FWF5 840 aa10.69□□□□□ -0.7
HTT-209ENST00000512068 NME9Q86XW9 330 aa10.69□□□□□ -0.7
HTT-209ENST00000512068 RBM33Q96EV2 1170 aaKnown RBP10.69□□□□□ -0.7
HTT-209ENST00000512068 MSH6P52701 1360 aa10.68□□□□□ -0.7
HTT-209ENST00000512068 PPM1GO15355 546 aaPredicted RBP10.68□□□□□ -0.7
HTT-209ENST00000512068 NEFLP07196 543 aa10.68□□□□□ -0.7
HTT-209ENST00000512068 C19orf44Q9H6X5 657 aa10.68□□□□□ -0.7
HTT-209ENST00000512068 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
HTT-209ENST00000512068 ADAMTS8Q9UP79 889 aa10.68□□□□□ -0.7
HTT-209ENST00000512068 KIF1AQ12756 1690 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms