RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 DISP2A7MBM2 1401 aa26.93■■□□□ 1.9
SMAD1-211ENST00000512019 PIK3C2AO00443 1686 aa26.92■■□□□ 1.9
SMAD1-211ENST00000512019 NLRP13Q86W25 1043 aa26.92■■□□□ 1.9
SMAD1-211ENST00000512019 TRIM37O94972 964 aa26.91■■□□□ 1.9
SMAD1-211ENST00000512019 GCP02774 474 aa26.91■■□□□ 1.9
SMAD1-211ENST00000512019 EDC4Q6P2E9 1401 aaKnown RBP26.9■■□□□ 1.9
SMAD1-211ENST00000512019 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
SMAD1-211ENST00000512019 EZH2Q15910 746 aaKnown RBP26.9■■□□□ 1.9
SMAD1-211ENST00000512019 BARGINQ6ZT62 677 aa26.9■■□□□ 1.9
SMAD1-211ENST00000512019 PARP4Q9UKK3 1724 aaKnown RBP26.9■■□□□ 1.9
SMAD1-211ENST00000512019 FAM196AQ6ZSG2 479 aa26.89■■□□□ 1.9
SMAD1-211ENST00000512019 PANK3Q9H999 370 aa26.89■■□□□ 1.9
SMAD1-211ENST00000512019 SLIT3O75094 1523 aa26.89■■□□□ 1.89
SMAD1-211ENST00000512019 COL18A1P39060 1754 aa26.88■■□□□ 1.89
SMAD1-211ENST00000512019 RREB1Q92766 1687 aa26.87■■□□□ 1.89
SMAD1-211ENST00000512019 ZBTB7CA1YPR0 619 aa26.87■■□□□ 1.89
SMAD1-211ENST00000512019 RGPD5Q99666 1765 aa26.86■■□□□ 1.89
SMAD1-211ENST00000512019 TCP11L2Q8N4U5 519 aa26.86■■□□□ 1.89
SMAD1-211ENST00000512019 NSD3Q9BZ95 1437 aa26.86■■□□□ 1.89
SMAD1-211ENST00000512019 NLRP6P59044 892 aa26.85■■□□□ 1.89
SMAD1-211ENST00000512019 PDE3BQ13370 1112 aa26.85■■□□□ 1.89
SMAD1-211ENST00000512019 R3HDM1Q15032 1099 aaKnown RBP26.85■■□□□ 1.89
SMAD1-211ENST00000512019 TTC21AQ8NDW8 1320 aa26.85■■□□□ 1.89
SMAD1-211ENST00000512019 CAMKK2Q96RR4 588 aa26.84■■□□□ 1.89
SMAD1-211ENST00000512019 NUP188Q5SRE5 1749 aa26.84■■□□□ 1.89
SMAD1-211ENST00000512019 WNK3Q9BYP7 1800 aa26.83■■□□□ 1.89
SMAD1-211ENST00000512019 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
SMAD1-211ENST00000512019 APBA3O96018 575 aa26.82■■□□□ 1.88
SMAD1-211ENST00000512019 CARD14Q9BXL6 1004 aa26.82■■□□□ 1.88
SMAD1-211ENST00000512019 SBF2Q86WG5 1849 aa26.81■■□□□ 1.88
SMAD1-211ENST00000512019 CRB1P82279 1406 aa26.81■■□□□ 1.88
SMAD1-211ENST00000512019 LRRC37A3O60309 1634 aa26.8■■□□□ 1.88
SMAD1-211ENST00000512019 PEAK1Q9H792 1746 aa26.8■■□□□ 1.88
SMAD1-211ENST00000512019 DDX10Q13206 875 aaKnown RBP26.8■■□□□ 1.88
SMAD1-211ENST00000512019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.8■■□□□ 1.88
SMAD1-211ENST00000512019 THRAP3Q9Y2W1 955 aaKnown RBP26.8■■□□□ 1.88
SMAD1-211ENST00000512019 KNSTRNQ9Y448 316 aa26.8■■□□□ 1.88
SMAD1-211ENST00000512019 CGNL1Q0VF96 1302 aa26.79■■□□□ 1.88
SMAD1-211ENST00000512019 AATKQ6ZMQ8 1374 aa26.79■■□□□ 1.88
SMAD1-211ENST00000512019 KIF20BQ96Q89 1820 aa26.77■■□□□ 1.88
SMAD1-211ENST00000512019 AXIN2Q9Y2T1 843 aa26.75■■□□□ 1.87
SMAD1-211ENST00000512019 PARD3Q8TEW0 1356 aa26.74■■□□□ 1.87
SMAD1-211ENST00000512019 NSD2O96028 1365 aa26.73■■□□□ 1.87
SMAD1-211ENST00000512019 PER1O15534 1290 aaPredicted RBP26.73■■□□□ 1.87
SMAD1-211ENST00000512019 NME9Q86XW9 330 aa26.73■■□□□ 1.87
SMAD1-211ENST00000512019 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
SMAD1-211ENST00000512019 USP31Q70CQ4 1352 aa26.71■■□□□ 1.87
SMAD1-211ENST00000512019 SOX12O15370 315 aa26.71■■□□□ 1.87
SMAD1-211ENST00000512019 TOM1L2Q6ZVM7 507 aa26.71■■□□□ 1.87
SMAD1-211ENST00000512019 NFAT5O94916 1531 aa26.7■■□□□ 1.87
SMAD1-211ENST00000512019 ARHGEF25Q86VW2 580 aa26.7■■□□□ 1.86
SMAD1-211ENST00000512019 OVOS2A0A0G2JMS6 1433 aa26.69■■□□□ 1.86
SMAD1-211ENST00000512019 OVOS2A0A0J9YW53 1432 aa26.69■■□□□ 1.86
SMAD1-211ENST00000512019 FYB1O15117 783 aa26.69■■□□□ 1.86
SMAD1-211ENST00000512019 OVOS2Q6IE36 1432 aa26.69■■□□□ 1.86
SMAD1-211ENST00000512019 NPC1L1Q9UHC9 1359 aa26.69■■□□□ 1.86
SMAD1-211ENST00000512019 WDR17Q8IZU2 1322 aa26.68■■□□□ 1.86
SMAD1-211ENST00000512019 ANKRD26Q9UPS8 1709 aa26.68■■□□□ 1.86
SMAD1-211ENST00000512019 AMER1Q5JTC6 1135 aaPredicted RBP26.68■■□□□ 1.86
SMAD1-211ENST00000512019 COG3Q96JB2 828 aa26.68■■□□□ 1.86
SMAD1-211ENST00000512019 RGPD3A6NKT7 1758 aaPredicted RBP26.67■■□□□ 1.86
SMAD1-211ENST00000512019 RGPD4Q7Z3J3 1758 aa26.67■■□□□ 1.86
SMAD1-211ENST00000512019 DDB1Q16531 1140 aa26.66■■□□□ 1.86
SMAD1-211ENST00000512019 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
SMAD1-211ENST00000512019 KCNH5Q8NCM2 988 aa26.65■■□□□ 1.86
SMAD1-211ENST00000512019 LTN1O94822 1766 aa26.65■■□□□ 1.86
SMAD1-211ENST00000512019 PTF1AQ7RTS3 328 aa26.64■■□□□ 1.86
SMAD1-211ENST00000512019 NBPF14Q5TI25 921 aa26.61■■□□□ 1.85
SMAD1-211ENST00000512019 MARCH10Q8NA82 808 aaPredicted RBP26.61■■□□□ 1.85
SMAD1-211ENST00000512019 CSB-PGBD3P0DP91 1061 aa26.6■■□□□ 1.85
SMAD1-211ENST00000512019 CC2D1BQ5T0F9 858 aaKnown RBP26.6■■□□□ 1.85
SMAD1-211ENST00000512019 CARD10Q9BWT7 1032 aa26.59■■□□□ 1.85
SMAD1-211ENST00000512019 MORC1Q86VD1 984 aa26.58■■□□□ 1.85
SMAD1-211ENST00000512019 ABCC6O95255 1503 aa26.58■■□□□ 1.85
SMAD1-211ENST00000512019 CDCA7Q9BWT1 371 aaPredicted RBP26.56■■□□□ 1.84
SMAD1-211ENST00000512019 CNGB1Q14028 1251 aaPredicted RBP26.55■■□□□ 1.84
SMAD1-211ENST00000512019 PLSCR1O15162 318 aa26.54■■□□□ 1.84
SMAD1-211ENST00000512019 BCL11BQ9C0K0 894 aaPredicted RBP26.54■■□□□ 1.84
SMAD1-211ENST00000512019 CASZ1Q86V15 1759 aa26.53■■□□□ 1.84
SMAD1-211ENST00000512019 BCL9O00512 1426 aa26.53■■□□□ 1.84
SMAD1-211ENST00000512019 ANO8Q9HCE9 1232 aaPredicted RBP26.52■■□□□ 1.84
SMAD1-211ENST00000512019 TNS2Q63HR2 1409 aa26.5■■□□□ 1.83
SMAD1-211ENST00000512019 EXOC5O00471 708 aa26.5■■□□□ 1.83
SMAD1-211ENST00000512019 PROM2Q8N271 834 aa26.5■■□□□ 1.83
SMAD1-211ENST00000512019 TNNT2P45379 298 aaPredicted RBP26.49■■□□□ 1.83
SMAD1-211ENST00000512019 NHSQ6T4R5 1651 aa26.49■■□□□ 1.83
SMAD1-211ENST00000512019 ERBB3P21860 1342 aa26.48■■□□□ 1.83
SMAD1-211ENST00000512019 RALBP1Q15311 655 aa26.48■■□□□ 1.83
SMAD1-211ENST00000512019 KCNQ2O43526 872 aa26.46■■□□□ 1.83
SMAD1-211ENST00000512019 SPON1Q9HCB6 807 aa26.46■■□□□ 1.83
SMAD1-211ENST00000512019 PDGFDQ9GZP0 370 aaPredicted RBP26.45■■□□□ 1.82
SMAD1-211ENST00000512019 NLRP2Q9NX02 1062 aa26.45■■□□□ 1.82
SMAD1-211ENST00000512019 ANP32CO43423 234 aa26.44■■□□□ 1.82
SMAD1-211ENST00000512019 RTL1A6NKG5 1358 aa26.44■■□□□ 1.82
SMAD1-211ENST00000512019 KIF24Q5T7B8 1368 aa26.44■■□□□ 1.82
SMAD1-211ENST00000512019 KAT6BQ8WYB5 2073 aa26.43■■□□□ 1.82
SMAD1-211ENST00000512019 MAP3K19Q56UN5 1328 aa26.43■■□□□ 1.82
SMAD1-211ENST00000512019 SMG6Q86US8 1419 aaKnown RBP26.43■■□□□ 1.82
SMAD1-211ENST00000512019 RRS1Q15050 365 aaKnown RBP26.43■■□□□ 1.82
SMAD1-211ENST00000512019 DIEXFQ68CQ4 756 aaKnown RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms