RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 SSH2Q76I76 1423 aa8.32□□□□□ -1.08
RNF4-217ENST00000511892 ABTB2Q8N961 1025 aa8.32□□□□□ -1.08
RNF4-217ENST00000511892 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
RNF4-217ENST00000511892 TONSLQ96HA7 1378 aa8.32□□□□□ -1.08
RNF4-217ENST00000511892 USP19O94966 1318 aa8.31□□□□□ -1.08
RNF4-217ENST00000511892 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
RNF4-217ENST00000511892 USP6P35125 1406 aa8.31□□□□□ -1.08
RNF4-217ENST00000511892 SLIT3O75094 1523 aa8.31□□□□□ -1.08
RNF4-217ENST00000511892 ZC3H6P61129 1189 aaKnown RBP8.31□□□□□ -1.08
RNF4-217ENST00000511892 CHRNA2Q15822 529 aa8.31□□□□□ -1.08
RNF4-217ENST00000511892 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
RNF4-217ENST00000511892 SPATA31A5Q5VU36 1347 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 SPATA31A7Q8IWB4 1347 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 CARD11Q9BXL7 1154 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 PLSCR2Q9NRY7 297 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 CCDC9Q9Y3X0 531 aaKnown RBP8.3□□□□□ -1.08
RNF4-217ENST00000511892 BRD4O60885 1362 aaPredicted RBP8.3□□□□□ -1.08
RNF4-217ENST00000511892 SBNO2Q9Y2G9 1366 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
RNF4-217ENST00000511892 CPSF1Q10570 1443 aaKnown RBP8.29□□□□□ -1.08
RNF4-217ENST00000511892 FAM98CQ17RN3 349 aaKnown RBP8.29□□□□□ -1.08
RNF4-217ENST00000511892 CPDO75976 1380 aa8.29□□□□□ -1.08
RNF4-217ENST00000511892 CD163L1Q9NR16 1453 aa8.29□□□□□ -1.08
RNF4-217ENST00000511892 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
RNF4-217ENST00000511892 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
RNF4-217ENST00000511892 LTN1O94822 1766 aa8.28□□□□□ -1.08
RNF4-217ENST00000511892 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
RNF4-217ENST00000511892 GCP02774 474 aa8.28□□□□□ -1.08
RNF4-217ENST00000511892 KRT27Q7Z3Y8 459 aa8.28□□□□□ -1.08
RNF4-217ENST00000511892 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
RNF4-217ENST00000511892 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
RNF4-217ENST00000511892 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
RNF4-217ENST00000511892 MNX1P50219 401 aaPredicted RBP8.27□□□□□ -1.09
RNF4-217ENST00000511892 NLRP6P59044 892 aa8.27□□□□□ -1.09
RNF4-217ENST00000511892 CCDC125Q86Z20 511 aa8.27□□□□□ -1.09
RNF4-217ENST00000511892 PELP1Q8IZL8 1130 aaKnown RBP8.27□□□□□ -1.09
RNF4-217ENST00000511892 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
RNF4-217ENST00000511892 BLMP54132 1417 aaPredicted RBP8.27□□□□□ -1.09
RNF4-217ENST00000511892 TTC21BQ7Z4L5 1316 aa8.27□□□□□ -1.09
RNF4-217ENST00000511892 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
RNF4-217ENST00000511892 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
RNF4-217ENST00000511892 PARP4Q9UKK3 1724 aaKnown RBP8.26□□□□□ -1.09
RNF4-217ENST00000511892 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
RNF4-217ENST00000511892 NFAT5O94916 1531 aa8.26□□□□□ -1.09
RNF4-217ENST00000511892 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
RNF4-217ENST00000511892 TESK2Q96S53 571 aa8.26□□□□□ -1.09
RNF4-217ENST00000511892 EVA1CP58658 441 aa8.25□□□□□ -1.09
RNF4-217ENST00000511892 FAM182BQ5T319 152 aa8.25□□□□□ -1.09
RNF4-217ENST00000511892 OTUD5Q96G74 571 aa8.25□□□□□ -1.09
RNF4-217ENST00000511892 TSPYL2Q9H2G4 693 aaPredicted RBP8.25□□□□□ -1.09
RNF4-217ENST00000511892 TTC21AQ8NDW8 1320 aa8.25□□□□□ -1.09
RNF4-217ENST00000511892 ST20-MTHFSA0A0A6YYL1 179 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 A0A0G2JS52 829 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
RNF4-217ENST00000511892 MYT1Q01538 1121 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 DEFB132Q7Z7B7 95 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 SLC12A5Q9H2X9 1139 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 AXIN2Q9Y2T1 843 aa8.24□□□□□ -1.09
RNF4-217ENST00000511892 AATKQ6ZMQ8 1374 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 CRB1P82279 1406 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 LRRC37A3O60309 1634 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 BARGINQ6ZT62 677 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 ARHGEF25Q86VW2 580 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 TCP11L2Q8N4U5 519 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 TMC1Q8TDI8 760 aa8.23□□□□□ -1.09
RNF4-217ENST00000511892 PUS7Q96PZ0 661 aaKnown RBP8.23□□□□□ -1.09
RNF4-217ENST00000511892 A0A1W2PP64 1363 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 MYOM1P52179 1685 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 SOX12O15370 315 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 NME9Q86XW9 330 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNF4-217ENST00000511892 MS4A3Q96HJ5 214 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 ABCC6O95255 1503 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 RGPD2P0DJD1 1756 aa8.22□□□□□ -1.09
RNF4-217ENST00000511892 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.09
RNF4-217ENST00000511892 KCNH5Q8NCM2 988 aa8.21□□□□□ -1.1
RNF4-217ENST00000511892 THRAP3Q9Y2W1 955 aaKnown RBP8.21□□□□□ -1.1
RNF4-217ENST00000511892 KAT6BQ8WYB5 2073 aa8.21□□□□□ -1.1
RNF4-217ENST00000511892 KIF20BQ96Q89 1820 aa8.21□□□□□ -1.1
RNF4-217ENST00000511892 USP47Q96K76 1375 aa8.21□□□□□ -1.1
RNF4-217ENST00000511892 RREB1Q92766 1687 aa8.21□□□□□ -1.1
RNF4-217ENST00000511892 SF3B2Q13435 895 aaKnown RBP8.2□□□□□ -1.1
RNF4-217ENST00000511892 HDGFL2Q7Z4V5 671 aaPredicted RBP8.2□□□□□ -1.1
RNF4-217ENST00000511892 WDR17Q8IZU2 1322 aa8.2□□□□□ -1.1
RNF4-217ENST00000511892 CLSPNQ9HAW4 1339 aa8.2□□□□□ -1.1
RNF4-217ENST00000511892 NUP188Q5SRE5 1749 aa8.2□□□□□ -1.1
RNF4-217ENST00000511892 OVOS2A0A0J9YW53 1432 aa8.2□□□□□ -1.1
RNF4-217ENST00000511892 DISP2A7MBM2 1401 aa8.2□□□□□ -1.1
RNF4-217ENST00000511892 OVOS2Q6IE36 1432 aa8.2□□□□□ -1.1
RNF4-217ENST00000511892 PDE3BQ13370 1112 aa8.19□□□□□ -1.1
RNF4-217ENST00000511892 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
RNF4-217ENST00000511892 TOM1L2Q6ZVM7 507 aa8.19□□□□□ -1.1
RNF4-217ENST00000511892 TERF2IPQ9NYB0 399 aa8.19□□□□□ -1.1
RNF4-217ENST00000511892 TIMELESSQ9UNS1 1208 aa8.19□□□□□ -1.1
RNF4-217ENST00000511892 NINLQ9Y2I6 1382 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms