RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
PTPN20-225ENST00000511769 PMFBP1Q8TBY8 1022 aa13.94□□□□□ -0.18
PTPN20-225ENST00000511769 PEAK1Q9H792 1746 aa13.94□□□□□ -0.18
PTPN20-225ENST00000511769 TRPM3Q9HCF6 1732 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-225ENST00000511769 SSH2Q76I76 1423 aa13.94□□□□□ -0.18
PTPN20-225ENST00000511769 ALS2Q96Q42 1657 aa13.94□□□□□ -0.18
PTPN20-225ENST00000511769 KIF3CO14782 793 aa13.93□□□□□ -0.18
PTPN20-225ENST00000511769 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
PTPN20-225ENST00000511769 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
PTPN20-225ENST00000511769 IFT172Q9UG01 1749 aa13.93□□□□□ -0.18
PTPN20-225ENST00000511769 JMYQ8N9B5 988 aa13.92□□□□□ -0.18
PTPN20-225ENST00000511769 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
PTPN20-225ENST00000511769 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
PTPN20-225ENST00000511769 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
PTPN20-225ENST00000511769 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
PTPN20-225ENST00000511769 AATKQ6ZMQ8 1374 aa13.91□□□□□ -0.18
PTPN20-225ENST00000511769 POLD1P28340 1107 aa13.9□□□□□ -0.18
PTPN20-225ENST00000511769 WDR90Q96KV7 1748 aa13.9□□□□□ -0.18
PTPN20-225ENST00000511769 ZNF219Q9P2Y4 722 aaPredicted RBP13.9□□□□□ -0.18
PTPN20-225ENST00000511769 HTRA3P83110 453 aa13.9□□□□□ -0.19
PTPN20-225ENST00000511769 ATP7BP35670 1465 aa13.89□□□□□ -0.19
PTPN20-225ENST00000511769 ZNF316A6NFI3 1004 aaPredicted RBP13.89□□□□□ -0.19
PTPN20-225ENST00000511769 TOPAZ1Q8N9V7 1692 aa13.88□□□□□ -0.19
PTPN20-225ENST00000511769 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
PTPN20-225ENST00000511769 THRAP3Q9Y2W1 955 aaKnown RBP13.88□□□□□ -0.19
PTPN20-225ENST00000511769 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
PTPN20-225ENST00000511769 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
PTPN20-225ENST00000511769 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
PTPN20-225ENST00000511769 ABCC11Q96J66 1382 aa13.85□□□□□ -0.19
PTPN20-225ENST00000511769 TOMM70O94826 608 aa13.85□□□□□ -0.19
PTPN20-225ENST00000511769 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTPN20-225ENST00000511769 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
PTPN20-225ENST00000511769 PHRF1Q9P1Y6 1649 aaKnown RBP13.85□□□□□ -0.19
PTPN20-225ENST00000511769 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-225ENST00000511769 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
PTPN20-225ENST00000511769 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
PTPN20-225ENST00000511769 DDB1Q16531 1140 aa13.83□□□□□ -0.2
PTPN20-225ENST00000511769 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
PTPN20-225ENST00000511769 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
PTPN20-225ENST00000511769 ADGRF5Q8IZF2 1346 aa13.82□□□□□ -0.2
PTPN20-225ENST00000511769 PAPPAQ13219 1627 aa13.82□□□□□ -0.2
PTPN20-225ENST00000511769 PPLO60437 1756 aa13.82□□□□□ -0.2
PTPN20-225ENST00000511769 TNS2Q63HR2 1409 aa13.82□□□□□ -0.2
PTPN20-225ENST00000511769 HSPA1AP0DMV8 641 aaKnown RBP13.82□□□□□ -0.2
PTPN20-225ENST00000511769 HSPA1BP0DMV9 641 aaKnown RBP13.82□□□□□ -0.2
PTPN20-225ENST00000511769 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
PTPN20-225ENST00000511769 ABCB7O75027 752 aa13.81□□□□□ -0.2
PTPN20-225ENST00000511769 FAM161AQ3B820 660 aa13.8□□□□□ -0.2
PTPN20-225ENST00000511769 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
PTPN20-225ENST00000511769 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
PTPN20-225ENST00000511769 TRPM1Q7Z4N2 1603 aa13.79□□□□□ -0.2
PTPN20-225ENST00000511769 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
PTPN20-225ENST00000511769 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN20-225ENST00000511769 MARCH10Q8NA82 808 aaPredicted RBP13.79□□□□□ -0.2
PTPN20-225ENST00000511769 YTHDC2Q9H6S0 1430 aaKnown RBP13.78□□□□□ -0.2
PTPN20-225ENST00000511769 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
PTPN20-225ENST00000511769 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
PTPN20-225ENST00000511769 NUTM2GQ5VZR2 741 aa13.78□□□□□ -0.2
PTPN20-225ENST00000511769 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
PTPN20-225ENST00000511769 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
PTPN20-225ENST00000511769 LMO7Q8WWI1 1683 aa13.78□□□□□ -0.2
PTPN20-225ENST00000511769 BCL9O00512 1426 aa13.77□□□□□ -0.21
PTPN20-225ENST00000511769 CRB1P82279 1406 aa13.77□□□□□ -0.21
PTPN20-225ENST00000511769 TULP4Q9NRJ4 1543 aa13.77□□□□□ -0.21
PTPN20-225ENST00000511769 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
PTPN20-225ENST00000511769 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
PTPN20-225ENST00000511769 NGDNQ8NEJ9 315 aaKnown RBP13.76□□□□□ -0.21
PTPN20-225ENST00000511769 USP47Q96K76 1375 aa13.76□□□□□ -0.21
PTPN20-225ENST00000511769 PIK3C2GO75747 1445 aa13.76□□□□□ -0.21
PTPN20-225ENST00000511769 COL5A2P05997 1499 aaPredicted RBP13.76□□□□□ -0.21
PTPN20-225ENST00000511769 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
PTPN20-225ENST00000511769 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
PTPN20-225ENST00000511769 SIRT1Q96EB6 747 aa13.73□□□□□ -0.21
PTPN20-225ENST00000511769 PCNTO95613 3336 aa13.73□□□□□ -0.21
PTPN20-225ENST00000511769 POTEHQ6S545 545 aa13.72□□□□□ -0.21
PTPN20-225ENST00000511769 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
PTPN20-225ENST00000511769 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
PTPN20-225ENST00000511769 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
PTPN20-225ENST00000511769 NMRK2Q9NPI5 230 aa13.72□□□□□ -0.21
PTPN20-225ENST00000511769 CPDO75976 1380 aa13.71□□□□□ -0.21
PTPN20-225ENST00000511769 PRR36Q9H6K5 1346 aa13.71□□□□□ -0.21
PTPN20-225ENST00000511769 ST20-MTHFSA0A0A6YYL1 179 aa13.71□□□□□ -0.21
PTPN20-225ENST00000511769 QSER1Q2KHR3 1735 aa13.71□□□□□ -0.22
PTPN20-225ENST00000511769 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.22
PTPN20-225ENST00000511769 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-225ENST00000511769 LRRC4BQ9NT99 713 aa13.7□□□□□ -0.22
PTPN20-225ENST00000511769 NHSQ6T4R5 1651 aa13.7□□□□□ -0.22
PTPN20-225ENST00000511769 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
PTPN20-225ENST00000511769 ACSBG1Q96GR2 724 aa13.69□□□□□ -0.22
PTPN20-225ENST00000511769 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
PTPN20-225ENST00000511769 ZBTB7CA1YPR0 619 aa13.68□□□□□ -0.22
PTPN20-225ENST00000511769 FSTL1Q12841 308 aa13.68□□□□□ -0.22
PTPN20-225ENST00000511769 TOM1L2Q6ZVM7 507 aa13.68□□□□□ -0.22
PTPN20-225ENST00000511769 TFCP2L1Q9NZI6 479 aa13.68□□□□□ -0.22
PTPN20-225ENST00000511769 BRD4O60885 1362 aaPredicted RBP13.68□□□□□ -0.22
PTPN20-225ENST00000511769 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
PTPN20-225ENST00000511769 TRAK1Q9UPV9 953 aa13.67□□□□□ -0.22
PTPN20-225ENST00000511769 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
PTPN20-225ENST00000511769 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
PTPN20-225ENST00000511769 POGKQ9P215 609 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms