RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 MAP3K7O43318 606 aa10.21□□□□□ -0.78
COPS4-209ENST00000511653 NHSL1Q5SYE7 1610 aa10.21□□□□□ -0.78
COPS4-209ENST00000511653 NUP155O75694 1391 aa10.21□□□□□ -0.78
COPS4-209ENST00000511653 PIK3R4Q99570 1358 aa10.21□□□□□ -0.78
COPS4-209ENST00000511653 NALCNQ8IZF0 1738 aa10.21□□□□□ -0.78
COPS4-209ENST00000511653 CLTCL1P53675 1640 aa10.2□□□□□ -0.78
COPS4-209ENST00000511653 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
COPS4-209ENST00000511653 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
COPS4-209ENST00000511653 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
COPS4-209ENST00000511653 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.2□□□□□ -0.78
COPS4-209ENST00000511653 HDGFP51858 240 aaKnown RBP10.19□□□□□ -0.78
COPS4-209ENST00000511653 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
COPS4-209ENST00000511653 EPAS1Q99814 870 aa10.19□□□□□ -0.78
COPS4-209ENST00000511653 ASXL1Q8IXJ9 1541 aa10.19□□□□□ -0.78
COPS4-209ENST00000511653 EP400Q96L91 3159 aa10.19□□□□□ -0.78
COPS4-209ENST00000511653 ITGAEP38570 1179 aa10.18□□□□□ -0.78
COPS4-209ENST00000511653 FOSBP53539 338 aa10.18□□□□□ -0.78
COPS4-209ENST00000511653 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
COPS4-209ENST00000511653 KIF1BO60333 1816 aa10.18□□□□□ -0.78
COPS4-209ENST00000511653 TYW1BQ6NUM6 668 aa10.18□□□□□ -0.78
COPS4-209ENST00000511653 AMOTL2Q9Y2J4 779 aa10.18□□□□□ -0.78
COPS4-209ENST00000511653 BRINP3Q76B58 766 aa10.17□□□□□ -0.78
COPS4-209ENST00000511653 C19orf44Q9H6X5 657 aa10.17□□□□□ -0.78
COPS4-209ENST00000511653 DCCP43146 1447 aa10.17□□□□□ -0.78
COPS4-209ENST00000511653 MST1RQ04912 1400 aa10.17□□□□□ -0.78
COPS4-209ENST00000511653 ATF3P18847 181 aa10.16□□□□□ -0.78
COPS4-209ENST00000511653 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
COPS4-209ENST00000511653 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
COPS4-209ENST00000511653 PARP9Q8IXQ6 854 aa10.16□□□□□ -0.78
COPS4-209ENST00000511653 PHOX2BQ99453 314 aa10.16□□□□□ -0.78
COPS4-209ENST00000511653 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
COPS4-209ENST00000511653 SPATA31A6Q5VVP1 1343 aa10.16□□□□□ -0.78
COPS4-209ENST00000511653 METP08581 1390 aa10.16□□□□□ -0.78
COPS4-209ENST00000511653 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
COPS4-209ENST00000511653 ADAM33Q9BZ11 813 aa10.15□□□□□ -0.78
COPS4-209ENST00000511653 FAM117AQ9C073 453 aa10.15□□□□□ -0.78
COPS4-209ENST00000511653 AMHR2Q16671 573 aa10.15□□□□□ -0.79
COPS4-209ENST00000511653 DOK7Q18PE1 504 aa10.15□□□□□ -0.79
COPS4-209ENST00000511653 ADGRL3Q9HAR2 1447 aa10.14□□□□□ -0.79
COPS4-209ENST00000511653 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
COPS4-209ENST00000511653 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
COPS4-209ENST00000511653 C6orf132Q5T0Z8 1188 aa10.13□□□□□ -0.79
COPS4-209ENST00000511653 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
COPS4-209ENST00000511653 LHX6Q9UPM6 363 aa10.13□□□□□ -0.79
COPS4-209ENST00000511653 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
COPS4-209ENST00000511653 ZNF326Q5BKZ1 582 aaKnown RBP10.12□□□□□ -0.79
COPS4-209ENST00000511653 LAMC1P11047 1609 aa10.12□□□□□ -0.79
COPS4-209ENST00000511653 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
COPS4-209ENST00000511653 NUTM2BA6NNL0 878 aaPredicted RBP10.12□□□□□ -0.79
COPS4-209ENST00000511653 NUTM2EB1AL46 878 aaPredicted RBP10.12□□□□□ -0.79
COPS4-209ENST00000511653 ZNF772Q68DY9 489 aaPredicted RBP10.12□□□□□ -0.79
COPS4-209ENST00000511653 NUTM2AQ8IVF1 878 aaPredicted RBP10.12□□□□□ -0.79
COPS4-209ENST00000511653 DDX17Q92841 729 aaKnown RBP10.12□□□□□ -0.79
COPS4-209ENST00000511653 ZDHHC16Q969W1 377 aa10.12□□□□□ -0.79
COPS4-209ENST00000511653 PPLO60437 1756 aa10.12□□□□□ -0.79
COPS4-209ENST00000511653 NLRP7Q8WX94 980 aa10.11□□□□□ -0.79
COPS4-209ENST00000511653 FBXW7Q969H0 707 aa10.11□□□□□ -0.79
COPS4-209ENST00000511653 NAIPQ13075 1403 aa10.11□□□□□ -0.79
COPS4-209ENST00000511653 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
COPS4-209ENST00000511653 OTUD5Q96G74 571 aa10.1□□□□□ -0.79
COPS4-209ENST00000511653 AFF2P51816 1311 aa10.1□□□□□ -0.79
COPS4-209ENST00000511653 PNPLA6Q8IY17 1366 aa10.1□□□□□ -0.79
COPS4-209ENST00000511653 PTCH1Q13635 1447 aa10.09□□□□□ -0.79
COPS4-209ENST00000511653 CDK12Q9NYV4 1490 aaPredicted RBP10.09□□□□□ -0.79
COPS4-209ENST00000511653 RRBP1Q9P2E9 1410 aaKnown RBP10.09□□□□□ -0.79
COPS4-209ENST00000511653 C1orf167Q5SNV9 1468 aa10.09□□□□□ -0.79
COPS4-209ENST00000511653 RGS12O14924 1447 aa10.09□□□□□ -0.79
COPS4-209ENST00000511653 ZSWIM6Q9HCJ5 1215 aa10.09□□□□□ -0.79
COPS4-209ENST00000511653 ROBO2Q9HCK4 1378 aa10.08□□□□□ -0.8
COPS4-209ENST00000511653 MS4A1P11836 297 aa10.08□□□□□ -0.8
COPS4-209ENST00000511653 RXRBP28702 533 aa10.08□□□□□ -0.8
COPS4-209ENST00000511653 ZNF710Q8N1W2 664 aa10.08□□□□□ -0.8
COPS4-209ENST00000511653 COL9A1P20849 921 aa10.07□□□□□ -0.8
COPS4-209ENST00000511653 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
COPS4-209ENST00000511653 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
COPS4-209ENST00000511653 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
COPS4-209ENST00000511653 PRAG1Q86YV5 1406 aa10.07□□□□□ -0.8
COPS4-209ENST00000511653 GIGYF2Q6Y7W6 1299 aaKnown RBP10.06□□□□□ -0.8
COPS4-209ENST00000511653 C8orf37Q96NL8 207 aa10.06□□□□□ -0.8
COPS4-209ENST00000511653 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
COPS4-209ENST00000511653 IFT172Q9UG01 1749 aa10.06□□□□□ -0.8
COPS4-209ENST00000511653 COL22A1Q8NFW1 1626 aaPredicted RBP10.06□□□□□ -0.8
COPS4-209ENST00000511653 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
COPS4-209ENST00000511653 TTC13Q8NBP0 860 aa10.06□□□□□ -0.8
COPS4-209ENST00000511653 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
COPS4-209ENST00000511653 MARF1Q9Y4F3 1742 aaKnown RBP10.05□□□□□ -0.8
COPS4-209ENST00000511653 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
COPS4-209ENST00000511653 ORAI2Q96SN7 254 aa10.05□□□□□ -0.8
COPS4-209ENST00000511653 CDC42BPGQ6DT37 1551 aa10.04□□□□□ -0.8
COPS4-209ENST00000511653 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
COPS4-209ENST00000511653 ADGRG1Q9Y653 693 aa10.04□□□□□ -0.8
COPS4-209ENST00000511653 HFM1A2PYH4 1435 aa10.04□□□□□ -0.8
COPS4-209ENST00000511653 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
COPS4-209ENST00000511653 SOS2Q07890 1332 aaPredicted RBP10.03□□□□□ -0.8
COPS4-209ENST00000511653 KNDC1Q76NI1 1749 aa10.03□□□□□ -0.8
COPS4-209ENST00000511653 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.8
COPS4-209ENST00000511653 METTL3Q86U44 580 aaKnown RBP10.02□□□□□ -0.8
COPS4-209ENST00000511653 RBM6P78332 1123 aaKnown RBP10.02□□□□□ -0.81
COPS4-209ENST00000511653 QTRT2Q9H974 415 aaKnown RBP10.02□□□□□ -0.81
COPS4-209ENST00000511653 MYOM2P54296 1465 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms