RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 BLMP54132 1417 aaPredicted RBP17.6■□□□□ 0.41
COL6A6-203ENST00000511332 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
COL6A6-203ENST00000511332 NPC1L1Q9UHC9 1359 aa17.59■□□□□ 0.41
COL6A6-203ENST00000511332 KIF24Q5T7B8 1368 aa17.58■□□□□ 0.4
COL6A6-203ENST00000511332 VPS72Q15906 364 aa17.58■□□□□ 0.4
COL6A6-203ENST00000511332 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
COL6A6-203ENST00000511332 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
COL6A6-203ENST00000511332 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
COL6A6-203ENST00000511332 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
COL6A6-203ENST00000511332 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
COL6A6-203ENST00000511332 RBM6P78332 1123 aaKnown RBP17.56■□□□□ 0.4
COL6A6-203ENST00000511332 CRB1P82279 1406 aa17.55■□□□□ 0.4
COL6A6-203ENST00000511332 RXRBP28702 533 aa17.55■□□□□ 0.4
COL6A6-203ENST00000511332 EVA1CP58658 441 aa17.55■□□□□ 0.4
COL6A6-203ENST00000511332 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
COL6A6-203ENST00000511332 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
COL6A6-203ENST00000511332 THSD7AQ9UPZ6 1657 aa17.55■□□□□ 0.4
COL6A6-203ENST00000511332 FLT4P35916 1363 aa17.54■□□□□ 0.4
COL6A6-203ENST00000511332 RGPD2P0DJD1 1756 aa17.54■□□□□ 0.4
COL6A6-203ENST00000511332 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
COL6A6-203ENST00000511332 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
COL6A6-203ENST00000511332 AMPHP49418 695 aa17.53■□□□□ 0.4
COL6A6-203ENST00000511332 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
COL6A6-203ENST00000511332 GJD4Q96KN9 370 aaPredicted RBP17.53■□□□□ 0.4
COL6A6-203ENST00000511332 BRWD3Q6RI45 1802 aa17.53■□□□□ 0.4
COL6A6-203ENST00000511332 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.4
COL6A6-203ENST00000511332 ERBB3P21860 1342 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 SPATA31A5Q5VU36 1347 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 SPATA31A7Q8IWB4 1347 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 WDR17Q8IZU2 1322 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 IP6K1Q92551 441 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 RGS12O14924 1447 aa17.52■□□□□ 0.4
COL6A6-203ENST00000511332 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
COL6A6-203ENST00000511332 HOXC9P31274 260 aa17.51■□□□□ 0.39
COL6A6-203ENST00000511332 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
COL6A6-203ENST00000511332 CSB-PGBD3P0DP91 1061 aa17.5■□□□□ 0.39
COL6A6-203ENST00000511332 FBLN1P23142 703 aa17.5■□□□□ 0.39
COL6A6-203ENST00000511332 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
COL6A6-203ENST00000511332 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
COL6A6-203ENST00000511332 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
COL6A6-203ENST00000511332 INSRP06213 1382 aa17.5■□□□□ 0.39
COL6A6-203ENST00000511332 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
COL6A6-203ENST00000511332 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
COL6A6-203ENST00000511332 LRRC37A3O60309 1634 aa17.49■□□□□ 0.39
COL6A6-203ENST00000511332 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
COL6A6-203ENST00000511332 TOM1L2Q6ZVM7 507 aa17.48■□□□□ 0.39
COL6A6-203ENST00000511332 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
COL6A6-203ENST00000511332 THRAP3Q9Y2W1 955 aaKnown RBP17.47■□□□□ 0.39
COL6A6-203ENST00000511332 PPM1GO15355 546 aaPredicted RBP17.46■□□□□ 0.39
COL6A6-203ENST00000511332 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
COL6A6-203ENST00000511332 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
COL6A6-203ENST00000511332 CARD10Q9BWT7 1032 aa17.45■□□□□ 0.38
COL6A6-203ENST00000511332 USP35Q9P2H5 1018 aa17.45■□□□□ 0.38
COL6A6-203ENST00000511332 FAM98CQ17RN3 349 aaKnown RBP17.44■□□□□ 0.38
COL6A6-203ENST00000511332 ILDR2Q71H61 639 aa17.44■□□□□ 0.38
COL6A6-203ENST00000511332 A0A0G2JS52 829 aa17.43■□□□□ 0.38
COL6A6-203ENST00000511332 MYT1Q01538 1121 aa17.43■□□□□ 0.38
COL6A6-203ENST00000511332 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
COL6A6-203ENST00000511332 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
COL6A6-203ENST00000511332 LTV1Q96GA3 475 aaPredicted RBP17.43■□□□□ 0.38
COL6A6-203ENST00000511332 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
COL6A6-203ENST00000511332 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
COL6A6-203ENST00000511332 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
COL6A6-203ENST00000511332 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
COL6A6-203ENST00000511332 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
COL6A6-203ENST00000511332 CDCA7Q9BWT1 371 aaPredicted RBP17.41■□□□□ 0.38
COL6A6-203ENST00000511332 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
COL6A6-203ENST00000511332 NCAPD2Q15021 1401 aa17.39■□□□□ 0.38
COL6A6-203ENST00000511332 PKD1L3Q7Z443 1732 aa17.39■□□□□ 0.37
COL6A6-203ENST00000511332 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
COL6A6-203ENST00000511332 TNS2Q63HR2 1409 aa17.38■□□□□ 0.37
COL6A6-203ENST00000511332 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
COL6A6-203ENST00000511332 MTHFSP49914 203 aa17.38■□□□□ 0.37
COL6A6-203ENST00000511332 IL2RBP14784 551 aa17.36■□□□□ 0.37
COL6A6-203ENST00000511332 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
COL6A6-203ENST00000511332 RALBP1Q15311 655 aa17.36■□□□□ 0.37
COL6A6-203ENST00000511332 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
COL6A6-203ENST00000511332 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
COL6A6-203ENST00000511332 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
COL6A6-203ENST00000511332 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
COL6A6-203ENST00000511332 MEGF6O75095 1541 aa17.35■□□□□ 0.37
COL6A6-203ENST00000511332 OVOS2A0A0G2JMS6 1433 aa17.34■□□□□ 0.37
COL6A6-203ENST00000511332 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
COL6A6-203ENST00000511332 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
COL6A6-203ENST00000511332 PLEKHG2Q9H7P9 1386 aa17.34■□□□□ 0.37
COL6A6-203ENST00000511332 IGSF1Q8N6C5 1336 aa17.33■□□□□ 0.36
COL6A6-203ENST00000511332 DDB1Q16531 1140 aa17.33■□□□□ 0.36
COL6A6-203ENST00000511332 PDE3BQ13370 1112 aa17.32■□□□□ 0.36
COL6A6-203ENST00000511332 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
COL6A6-203ENST00000511332 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
COL6A6-203ENST00000511332 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
COL6A6-203ENST00000511332 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
COL6A6-203ENST00000511332 EYA1Q99502 592 aa17.31■□□□□ 0.36
COL6A6-203ENST00000511332 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
COL6A6-203ENST00000511332 IL13P35225 146 aa17.3■□□□□ 0.36
COL6A6-203ENST00000511332 EP400Q96L91 3159 aa17.3■□□□□ 0.36
COL6A6-203ENST00000511332 EXOC5O00471 708 aa17.29■□□□□ 0.36
COL6A6-203ENST00000511332 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
COL6A6-203ENST00000511332 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms