RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CDCA8Q53HL2 280 aa16.89■□□□□ 0.29
HMGB2-205ENST00000511316 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
HMGB2-205ENST00000511316 ANKRD36BQ8N2N9 1353 aa16.88■□□□□ 0.29
HMGB2-205ENST00000511316 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
HMGB2-205ENST00000511316 CPDO75976 1380 aa16.88■□□□□ 0.29
HMGB2-205ENST00000511316 PHRF1Q9P1Y6 1649 aaKnown RBP16.87■□□□□ 0.29
HMGB2-205ENST00000511316 RXRBP28702 533 aa16.87■□□□□ 0.29
HMGB2-205ENST00000511316 HAP1P54257 671 aaPredicted RBP16.87■□□□□ 0.29
HMGB2-205ENST00000511316 RRP1P56182 461 aaKnown RBP16.87■□□□□ 0.29
HMGB2-205ENST00000511316 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
HMGB2-205ENST00000511316 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
HMGB2-205ENST00000511316 TRPC5Q9UL62 973 aaPredicted RBP16.87■□□□□ 0.29
HMGB2-205ENST00000511316 SLIT3O75094 1523 aa16.87■□□□□ 0.29
HMGB2-205ENST00000511316 BTG4Q9NY30 223 aa16.86■□□□□ 0.29
HMGB2-205ENST00000511316 EP400Q96L91 3159 aa16.86■□□□□ 0.29
HMGB2-205ENST00000511316 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
HMGB2-205ENST00000511316 FYB1O15117 783 aa16.85■□□□□ 0.29
HMGB2-205ENST00000511316 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
HMGB2-205ENST00000511316 MYOM1P52179 1685 aa16.85■□□□□ 0.29
HMGB2-205ENST00000511316 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
HMGB2-205ENST00000511316 ARHGEF25Q86VW2 580 aa16.84■□□□□ 0.29
HMGB2-205ENST00000511316 PRDM11Q9NQV5 511 aa16.84■□□□□ 0.29
HMGB2-205ENST00000511316 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
HMGB2-205ENST00000511316 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
HMGB2-205ENST00000511316 VPS72Q15906 364 aa16.84■□□□□ 0.29
HMGB2-205ENST00000511316 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.28
HMGB2-205ENST00000511316 SOCS7O14512 581 aa16.83■□□□□ 0.28
HMGB2-205ENST00000511316 ONECUT3O60422 494 aaPredicted RBP16.83■□□□□ 0.28
HMGB2-205ENST00000511316 POLR3GLQ9BT43 218 aa16.83■□□□□ 0.28
HMGB2-205ENST00000511316 OVOS2A0A0J9YW53 1432 aa16.83■□□□□ 0.28
HMGB2-205ENST00000511316 OVOS2Q6IE36 1432 aa16.83■□□□□ 0.28
HMGB2-205ENST00000511316 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.82■□□□□ 0.28
HMGB2-205ENST00000511316 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
HMGB2-205ENST00000511316 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
HMGB2-205ENST00000511316 NFAT5O94916 1531 aa16.82■□□□□ 0.28
HMGB2-205ENST00000511316 PLCH1Q4KWH8 1693 aa16.82■□□□□ 0.28
HMGB2-205ENST00000511316 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
HMGB2-205ENST00000511316 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
HMGB2-205ENST00000511316 FBLN1P23142 703 aa16.81■□□□□ 0.28
HMGB2-205ENST00000511316 BLMP54132 1417 aaPredicted RBP16.81■□□□□ 0.28
HMGB2-205ENST00000511316 GLI3P10071 1580 aa16.81■□□□□ 0.28
HMGB2-205ENST00000511316 CDK12Q9NYV4 1490 aaPredicted RBP16.81■□□□□ 0.28
HMGB2-205ENST00000511316 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
HMGB2-205ENST00000511316 NRAPQ86VF7 1730 aa16.8■□□□□ 0.28
HMGB2-205ENST00000511316 KCNH5Q8NCM2 988 aa16.8■□□□□ 0.28
HMGB2-205ENST00000511316 COL18A1P39060 1754 aa16.8■□□□□ 0.28
HMGB2-205ENST00000511316 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
HMGB2-205ENST00000511316 RGS12O14924 1447 aa16.79■□□□□ 0.28
HMGB2-205ENST00000511316 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
HMGB2-205ENST00000511316 PANK3Q9H999 370 aa16.78■□□□□ 0.28
HMGB2-205ENST00000511316 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
HMGB2-205ENST00000511316 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
HMGB2-205ENST00000511316 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
HMGB2-205ENST00000511316 SOX12O15370 315 aa16.77■□□□□ 0.28
HMGB2-205ENST00000511316 LARP1Q6PKG0 1096 aaKnown RBP16.77■□□□□ 0.27
HMGB2-205ENST00000511316 PER1O15534 1290 aaPredicted RBP16.75■□□□□ 0.27
HMGB2-205ENST00000511316 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
HMGB2-205ENST00000511316 COL5A2P05997 1499 aaPredicted RBP16.75■□□□□ 0.27
HMGB2-205ENST00000511316 SPATA31A1Q5TZJ5 1347 aa16.75■□□□□ 0.27
HMGB2-205ENST00000511316 COG3Q96JB2 828 aa16.74■□□□□ 0.27
HMGB2-205ENST00000511316 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
HMGB2-205ENST00000511316 SEPT12Q8IYM1 358 aa16.72■□□□□ 0.27
HMGB2-205ENST00000511316 BACH2Q9BYV9 841 aa16.72■□□□□ 0.27
HMGB2-205ENST00000511316 MAP3K19Q56UN5 1328 aa16.71■□□□□ 0.27
HMGB2-205ENST00000511316 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
HMGB2-205ENST00000511316 PDE4AP27815 886 aa16.7■□□□□ 0.26
HMGB2-205ENST00000511316 EVA1CP58658 441 aa16.7■□□□□ 0.26
HMGB2-205ENST00000511316 NGEFQ8N5V2 710 aa16.7■□□□□ 0.26
HMGB2-205ENST00000511316 CCDC9Q9Y3X0 531 aaKnown RBP16.7■□□□□ 0.26
HMGB2-205ENST00000511316 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
HMGB2-205ENST00000511316 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.7■□□□□ 0.26
HMGB2-205ENST00000511316 IP6K1Q92551 441 aa16.7■□□□□ 0.26
HMGB2-205ENST00000511316 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
HMGB2-205ENST00000511316 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
HMGB2-205ENST00000511316 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
HMGB2-205ENST00000511316 BARGINQ6ZT62 677 aa16.69■□□□□ 0.26
HMGB2-205ENST00000511316 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
HMGB2-205ENST00000511316 WDR17Q8IZU2 1322 aa16.69■□□□□ 0.26
HMGB2-205ENST00000511316 EXOC6Q8TAG9 804 aa16.68■□□□□ 0.26
HMGB2-205ENST00000511316 ERBB3P21860 1342 aa16.67■□□□□ 0.26
HMGB2-205ENST00000511316 ABCC6O95255 1503 aa16.67■□□□□ 0.26
HMGB2-205ENST00000511316 HOXC9P31274 260 aa16.67■□□□□ 0.26
HMGB2-205ENST00000511316 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
HMGB2-205ENST00000511316 NPC1L1Q9UHC9 1359 aa16.67■□□□□ 0.26
HMGB2-205ENST00000511316 CRB1P82279 1406 aa16.66■□□□□ 0.26
HMGB2-205ENST00000511316 NBR1Q14596 966 aa16.66■□□□□ 0.26
HMGB2-205ENST00000511316 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
HMGB2-205ENST00000511316 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
HMGB2-205ENST00000511316 LTN1O94822 1766 aa16.65■□□□□ 0.26
HMGB2-205ENST00000511316 BRWD3Q6RI45 1802 aa16.65■□□□□ 0.26
HMGB2-205ENST00000511316 CARD10Q9BWT7 1032 aa16.65■□□□□ 0.26
HMGB2-205ENST00000511316 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
HMGB2-205ENST00000511316 KIF20BQ96Q89 1820 aa16.64■□□□□ 0.25
HMGB2-205ENST00000511316 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.25
HMGB2-205ENST00000511316 POLKQ9UBT6 870 aa16.64■□□□□ 0.25
HMGB2-205ENST00000511316 EMILIN1Q9Y6C2 1016 aa16.64■□□□□ 0.25
HMGB2-205ENST00000511316 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
HMGB2-205ENST00000511316 TOM1L2Q6ZVM7 507 aa16.63■□□□□ 0.25
HMGB2-205ENST00000511316 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
HMGB2-205ENST00000511316 KRT27Q7Z3Y8 459 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms