RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.21
PTCD2-208ENST00000510676 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.2
PTCD2-208ENST00000510676 PRELPP51888 382 aa16.33■□□□□ 0.2
PTCD2-208ENST00000510676 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
PTCD2-208ENST00000510676 COL13A1Q5TAT6 717 aaPredicted RBP16.32■□□□□ 0.2
PTCD2-208ENST00000510676 USP19O94966 1318 aa16.31■□□□□ 0.2
PTCD2-208ENST00000510676 APLP1P51693 650 aa16.31■□□□□ 0.2
PTCD2-208ENST00000510676 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
PTCD2-208ENST00000510676 ITGAEP38570 1179 aa16.3■□□□□ 0.2
PTCD2-208ENST00000510676 RGL3Q3MIN7 710 aa16.3■□□□□ 0.2
PTCD2-208ENST00000510676 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
PTCD2-208ENST00000510676 SLC16A10Q8TF71 515 aa16.3■□□□□ 0.2
PTCD2-208ENST00000510676 POGKQ9P215 609 aa16.3■□□□□ 0.2
PTCD2-208ENST00000510676 WASLO00401 505 aaPredicted RBP16.29■□□□□ 0.2
PTCD2-208ENST00000510676 POLD1P28340 1107 aa16.27■□□□□ 0.2
PTCD2-208ENST00000510676 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
PTCD2-208ENST00000510676 NUTM2GQ5VZR2 741 aa16.27■□□□□ 0.2
PTCD2-208ENST00000510676 HIRIP3Q9BW71 556 aaPredicted RBP16.27■□□□□ 0.2
PTCD2-208ENST00000510676 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.2
PTCD2-208ENST00000510676 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
PTCD2-208ENST00000510676 CAPN15O75808 1086 aa16.26■□□□□ 0.19
PTCD2-208ENST00000510676 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
PTCD2-208ENST00000510676 POLR3AO14802 1390 aaPredicted RBP16.26■□□□□ 0.19
PTCD2-208ENST00000510676 TOPAZ1Q8N9V7 1692 aa16.25■□□□□ 0.19
PTCD2-208ENST00000510676 AKAP12Q02952 1782 aa16.24■□□□□ 0.19
PTCD2-208ENST00000510676 KIF3CO14782 793 aa16.24■□□□□ 0.19
PTCD2-208ENST00000510676 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
PTCD2-208ENST00000510676 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
PTCD2-208ENST00000510676 ITSN1Q15811 1721 aa16.23■□□□□ 0.19
PTCD2-208ENST00000510676 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
PTCD2-208ENST00000510676 GCP02774 474 aa16.23■□□□□ 0.19
PTCD2-208ENST00000510676 WNK3Q9BYP7 1800 aa16.23■□□□□ 0.19
PTCD2-208ENST00000510676 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
PTCD2-208ENST00000510676 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
PTCD2-208ENST00000510676 JMYQ8N9B5 988 aa16.22■□□□□ 0.19
PTCD2-208ENST00000510676 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
PTCD2-208ENST00000510676 NHSQ6T4R5 1651 aa16.21■□□□□ 0.18
PTCD2-208ENST00000510676 ABTB2Q8N961 1025 aa16.2■□□□□ 0.18
PTCD2-208ENST00000510676 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
PTCD2-208ENST00000510676 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
PTCD2-208ENST00000510676 NUDT16Q96DE0 195 aaKnown RBP16.2■□□□□ 0.18
PTCD2-208ENST00000510676 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
PTCD2-208ENST00000510676 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
PTCD2-208ENST00000510676 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
PTCD2-208ENST00000510676 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
PTCD2-208ENST00000510676 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
PTCD2-208ENST00000510676 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
PTCD2-208ENST00000510676 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
PTCD2-208ENST00000510676 ACEP12821 1306 aa16.18■□□□□ 0.18
PTCD2-208ENST00000510676 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
PTCD2-208ENST00000510676 PLEKHG3A1L390 1219 aa16.16■□□□□ 0.18
PTCD2-208ENST00000510676 TRAK1Q9UPV9 953 aa16.16■□□□□ 0.18
PTCD2-208ENST00000510676 TNS2Q63HR2 1409 aa16.16■□□□□ 0.18
PTCD2-208ENST00000510676 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
PTCD2-208ENST00000510676 CARD10Q9BWT7 1032 aa16.15■□□□□ 0.18
PTCD2-208ENST00000510676 COL18A1P39060 1754 aa16.15■□□□□ 0.18
PTCD2-208ENST00000510676 EXOC5O00471 708 aa16.14■□□□□ 0.17
PTCD2-208ENST00000510676 TOMM70O94826 608 aa16.14■□□□□ 0.17
PTCD2-208ENST00000510676 USP6P35125 1406 aa16.13■□□□□ 0.17
PTCD2-208ENST00000510676 SLC27A3Q5K4L6 730 aa16.13■□□□□ 0.17
PTCD2-208ENST00000510676 SLIT3O75094 1523 aa16.13■□□□□ 0.17
PTCD2-208ENST00000510676 ARHGEF28Q8N1W1 1705 aaKnown RBP16.12■□□□□ 0.17
PTCD2-208ENST00000510676 WDR90Q96KV7 1748 aa16.12■□□□□ 0.17
PTCD2-208ENST00000510676 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
PTCD2-208ENST00000510676 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
PTCD2-208ENST00000510676 CCDC61Q9Y6R9 512 aa16.12■□□□□ 0.17
PTCD2-208ENST00000510676 BTAF1O14981 1849 aa16.12■□□□□ 0.17
PTCD2-208ENST00000510676 ABCC6O95255 1503 aa16.11■□□□□ 0.17
PTCD2-208ENST00000510676 TRPM1Q7Z4N2 1603 aa16.11■□□□□ 0.17
PTCD2-208ENST00000510676 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
PTCD2-208ENST00000510676 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
PTCD2-208ENST00000510676 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
PTCD2-208ENST00000510676 CCDC7Q96M83 1385 aa16.08■□□□□ 0.16
PTCD2-208ENST00000510676 CDK19Q9BWU1 502 aa16.07■□□□□ 0.16
PTCD2-208ENST00000510676 CPSF1Q10570 1443 aaKnown RBP16.06■□□□□ 0.16
PTCD2-208ENST00000510676 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
PTCD2-208ENST00000510676 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
PTCD2-208ENST00000510676 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
PTCD2-208ENST00000510676 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
PTCD2-208ENST00000510676 ZBTB7CA1YPR0 619 aa16.04■□□□□ 0.16
PTCD2-208ENST00000510676 ARHGEF25Q86VW2 580 aa16.04■□□□□ 0.16
PTCD2-208ENST00000510676 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
PTCD2-208ENST00000510676 HTRA3P83110 453 aa16.03■□□□□ 0.16
PTCD2-208ENST00000510676 NLRP6P59044 892 aa16.02■□□□□ 0.16
PTCD2-208ENST00000510676 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
PTCD2-208ENST00000510676 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
PTCD2-208ENST00000510676 FSTL1Q12841 308 aa16■□□□□ 0.15
PTCD2-208ENST00000510676 CSB-PGBD3P0DP91 1061 aa15.99■□□□□ 0.15
PTCD2-208ENST00000510676 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
PTCD2-208ENST00000510676 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
PTCD2-208ENST00000510676 KCNQ4P56696 695 aa15.97■□□□□ 0.15
PTCD2-208ENST00000510676 NMRK2Q9NPI5 230 aa15.97■□□□□ 0.15
PTCD2-208ENST00000510676 PIK3C2AO00443 1686 aa15.97■□□□□ 0.15
PTCD2-208ENST00000510676 RGPD5Q99666 1765 aa15.97■□□□□ 0.15
PTCD2-208ENST00000510676 MSL1Q68DK7 614 aa15.96■□□□□ 0.15
PTCD2-208ENST00000510676 LY75O60449 1722 aa15.96■□□□□ 0.15
PTCD2-208ENST00000510676 HSPA1AP0DMV8 641 aaKnown RBP15.95■□□□□ 0.14
PTCD2-208ENST00000510676 HSPA1BP0DMV9 641 aaKnown RBP15.95■□□□□ 0.14
PTCD2-208ENST00000510676 IL2RBP14784 551 aa15.95■□□□□ 0.14
PTCD2-208ENST00000510676 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms