RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 USP31Q70CQ4 1352 aa32.33■■■□□ 2.77
SNF8-209ENST00000510558 ZRANB1Q9UGI0 708 aa32.32■■■□□ 2.76
SNF8-209ENST00000510558 THRAP3Q9Y2W1 955 aaKnown RBP32.32■■■□□ 2.76
SNF8-209ENST00000510558 NINLQ9Y2I6 1382 aa32.32■■■□□ 2.76
SNF8-209ENST00000510558 NME9Q86XW9 330 aa32.31■■■□□ 2.76
SNF8-209ENST00000510558 AXIN2Q9Y2T1 843 aa32.3■■■□□ 2.76
SNF8-209ENST00000510558 PARP4Q9UKK3 1724 aaKnown RBP32.29■■■□□ 2.76
SNF8-209ENST00000510558 TNS1Q9HBL0 1735 aaKnown RBP32.27■■■□□ 2.76
SNF8-209ENST00000510558 ABCC6O95255 1503 aa32.26■■■□□ 2.76
SNF8-209ENST00000510558 WDR17Q8IZU2 1322 aa32.26■■■□□ 2.75
SNF8-209ENST00000510558 LTN1O94822 1766 aa32.25■■■□□ 2.75
SNF8-209ENST00000510558 PDE3BQ13370 1112 aa32.25■■■□□ 2.75
SNF8-209ENST00000510558 TOM1L2Q6ZVM7 507 aa32.25■■■□□ 2.75
SNF8-209ENST00000510558 WNK3Q9BYP7 1800 aa32.25■■■□□ 2.75
SNF8-209ENST00000510558 BAG6P46379 1132 aa32.24■■■□□ 2.75
SNF8-209ENST00000510558 TMF1P82094 1093 aa32.24■■■□□ 2.75
SNF8-209ENST00000510558 FAM196AQ6ZSG2 479 aa32.24■■■□□ 2.75
SNF8-209ENST00000510558 OVOS2A0A0J9YW53 1432 aa32.21■■■□□ 2.75
SNF8-209ENST00000510558 OVOS2Q6IE36 1432 aa32.21■■■□□ 2.75
SNF8-209ENST00000510558 LRRC37A3O60309 1634 aa32.2■■■□□ 2.75
SNF8-209ENST00000510558 CSB-PGBD3P0DP91 1061 aa32.18■■■□□ 2.74
SNF8-209ENST00000510558 ANKRD36BQ8N2N9 1353 aa32.18■■■□□ 2.74
SNF8-209ENST00000510558 DISP2A7MBM2 1401 aa32.17■■■□□ 2.74
SNF8-209ENST00000510558 TRIM37O94972 964 aa32.16■■■□□ 2.74
SNF8-209ENST00000510558 CCER1Q8TC90 406 aaPredicted RBP32.16■■■□□ 2.74
SNF8-209ENST00000510558 CARD10Q9BWT7 1032 aa32.15■■■□□ 2.74
SNF8-209ENST00000510558 EN1Q05925 392 aaPredicted RBP32.14■■■□□ 2.74
SNF8-209ENST00000510558 CDCA8Q53HL2 280 aa32.13■■■□□ 2.73
SNF8-209ENST00000510558 PEAK1Q9H792 1746 aa32.12■■■□□ 2.73
SNF8-209ENST00000510558 DDB1Q16531 1140 aa32.1■■■□□ 2.73
SNF8-209ENST00000510558 CDCA7Q9BWT1 371 aaPredicted RBP32.1■■■□□ 2.73
SNF8-209ENST00000510558 CCDC7Q96M83 1385 aa32.09■■■□□ 2.73
SNF8-209ENST00000510558 MYOM1P52179 1685 aa32.09■■■□□ 2.73
SNF8-209ENST00000510558 ERBB3P21860 1342 aa32.09■■■□□ 2.73
SNF8-209ENST00000510558 OVOS2A0A0G2JMS6 1433 aa32.09■■■□□ 2.73
SNF8-209ENST00000510558 COG3Q96JB2 828 aa32.08■■■□□ 2.73
SNF8-209ENST00000510558 SBF2Q86WG5 1849 aa32.07■■■□□ 2.72
SNF8-209ENST00000510558 C11orf95C9JLR9 678 aaPredicted RBP32.05■■■□□ 2.72
SNF8-209ENST00000510558 APBA3O96018 575 aa32.05■■■□□ 2.72
SNF8-209ENST00000510558 EZH2Q15910 746 aaKnown RBP32.04■■■□□ 2.72
SNF8-209ENST00000510558 KIF20BQ96Q89 1820 aa32.04■■■□□ 2.72
SNF8-209ENST00000510558 ANKRD24Q8TF21 1146 aa32.03■■■□□ 2.72
SNF8-209ENST00000510558 CAMKK2Q96RR4 588 aa32.02■■■□□ 2.72
SNF8-209ENST00000510558 NLRP2Q9NX02 1062 aa32.02■■■□□ 2.72
SNF8-209ENST00000510558 IP6K1Q92551 441 aa32.01■■■□□ 2.71
SNF8-209ENST00000510558 RREB1Q92766 1687 aa32■■■□□ 2.71
SNF8-209ENST00000510558 FAM208AQ9UK61 1670 aaKnown RBP32■■■□□ 2.71
SNF8-209ENST00000510558 PARD3Q8TEW0 1356 aa32■■■□□ 2.71
SNF8-209ENST00000510558 FYB1O15117 783 aa31.99■■■□□ 2.71
SNF8-209ENST00000510558 MARCH10Q8NA82 808 aaPredicted RBP31.99■■■□□ 2.71
SNF8-209ENST00000510558 MAP3K19Q56UN5 1328 aa31.99■■■□□ 2.71
SNF8-209ENST00000510558 GGNBP2Q9H3C7 697 aa31.98■■■□□ 2.71
SNF8-209ENST00000510558 TNS2Q63HR2 1409 aa31.98■■■□□ 2.71
SNF8-209ENST00000510558 EXOC5O00471 708 aa31.97■■■□□ 2.71
SNF8-209ENST00000510558 FBLN1P23142 703 aa31.97■■■□□ 2.71
SNF8-209ENST00000510558 PSDA5PKW4 1024 aaPredicted RBP31.96■■■□□ 2.71
SNF8-209ENST00000510558 BCL9O00512 1426 aa31.95■■■□□ 2.71
SNF8-209ENST00000510558 NUP188Q5SRE5 1749 aa31.95■■■□□ 2.7
SNF8-209ENST00000510558 HOXC9P31274 260 aa31.93■■■□□ 2.7
SNF8-209ENST00000510558 AMPHP49418 695 aa31.93■■■□□ 2.7
SNF8-209ENST00000510558 EIF4G2P78344 907 aaKnown RBP eCLIP31.93■■■□□ 2.7
SNF8-209ENST00000510558 CARD14Q9BXL6 1004 aa31.93■■■□□ 2.7
SNF8-209ENST00000510558 NSD3Q9BZ95 1437 aa31.92■■■□□ 2.7
SNF8-209ENST00000510558 IL2RBP14784 551 aa31.92■■■□□ 2.7
SNF8-209ENST00000510558 LTV1Q96GA3 475 aaPredicted RBP31.92■■■□□ 2.7
SNF8-209ENST00000510558 RGPD3A6NKT7 1758 aaPredicted RBP31.91■■■□□ 2.7
SNF8-209ENST00000510558 RGPD4Q7Z3J3 1758 aa31.91■■■□□ 2.7
SNF8-209ENST00000510558 RGPD2P0DJD1 1756 aa31.9■■■□□ 2.7
SNF8-209ENST00000510558 RTL1A6NKG5 1358 aa31.9■■■□□ 2.7
SNF8-209ENST00000510558 HSPA5P11021 654 aaKnown RBP31.89■■■□□ 2.7
SNF8-209ENST00000510558 RRS1Q15050 365 aaKnown RBP31.89■■■□□ 2.7
SNF8-209ENST00000510558 R3HDM1Q15032 1099 aaKnown RBP31.88■■■□□ 2.69
SNF8-209ENST00000510558 BCL11BQ9C0K0 894 aaPredicted RBP31.88■■■□□ 2.69
SNF8-209ENST00000510558 SRCAPQ6ZRS2 3230 aa31.87■■■□□ 2.69
SNF8-209ENST00000510558 LRP5O75197 1615 aa31.87■■■□□ 2.69
SNF8-209ENST00000510558 PTF1AQ7RTS3 328 aa31.87■■■□□ 2.69
SNF8-209ENST00000510558 POLR3GLQ9BT43 218 aa31.86■■■□□ 2.69
SNF8-209ENST00000510558 PLSCR1O15162 318 aa31.83■■■□□ 2.69
SNF8-209ENST00000510558 NHSQ6T4R5 1651 aa31.83■■■□□ 2.69
SNF8-209ENST00000510558 NBPF14Q5TI25 921 aa31.79■■■□□ 2.68
SNF8-209ENST00000510558 CGNL1Q0VF96 1302 aa31.77■■■□□ 2.68
SNF8-209ENST00000510558 KAT6BQ8WYB5 2073 aa31.77■■■□□ 2.68
SNF8-209ENST00000510558 SMG6Q86US8 1419 aaKnown RBP31.77■■■□□ 2.68
SNF8-209ENST00000510558 FLT4P35916 1363 aa31.77■■■□□ 2.68
SNF8-209ENST00000510558 KIF24Q5T7B8 1368 aa31.77■■■□□ 2.68
SNF8-209ENST00000510558 ANKRD26Q9UPS8 1709 aa31.76■■■□□ 2.67
SNF8-209ENST00000510558 INSRP06213 1382 aa31.76■■■□□ 2.67
SNF8-209ENST00000510558 KCNQ2O43526 872 aa31.75■■■□□ 2.67
SNF8-209ENST00000510558 ACSBG1Q96GR2 724 aa31.75■■■□□ 2.67
SNF8-209ENST00000510558 HSP90AB2PQ58FF8 381 aa31.74■■■□□ 2.67
SNF8-209ENST00000510558 SHANK3Q9BYB0 1731 aa31.74■■■□□ 2.67
SNF8-209ENST00000510558 MAP2P11137 1827 aaKnown RBP31.73■■■□□ 2.67
SNF8-209ENST00000510558 NBPF6Q5VWK0 638 aa31.73■■■□□ 2.67
SNF8-209ENST00000510558 NBPF4Q96M43 638 aa31.73■■■□□ 2.67
SNF8-209ENST00000510558 MEGF6O75095 1541 aa31.73■■■□□ 2.67
SNF8-209ENST00000510558 EMILIN1Q9Y6C2 1016 aa31.72■■■□□ 2.67
SNF8-209ENST00000510558 BTAF1O14981 1849 aa31.72■■■□□ 2.67
SNF8-209ENST00000510558 DDX54Q8TDD1 881 aaKnown RBP31.71■■■□□ 2.67
SNF8-209ENST00000510558 PROM2Q8N271 834 aa31.7■■■□□ 2.67
SNF8-209ENST00000510558 USHBP1Q8N6Y0 703 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms