RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 PIK3C2AO00443 1686 aa21.15■□□□□ 0.98
SMAD5-206ENST00000509962 KTN1Q86UP2 1357 aaKnown RBP21.14■□□□□ 0.98
SMAD5-206ENST00000509962 PLSCR1O15162 318 aa21.13■□□□□ 0.97
SMAD5-206ENST00000509962 COL18A1P39060 1754 aa21.13■□□□□ 0.97
SMAD5-206ENST00000509962 RREB1Q92766 1687 aa21.12■□□□□ 0.97
SMAD5-206ENST00000509962 CARD10Q9BWT7 1032 aa21.12■□□□□ 0.97
SMAD5-206ENST00000509962 BCL11BQ9C0K0 894 aaPredicted RBP21.12■□□□□ 0.97
SMAD5-206ENST00000509962 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
SMAD5-206ENST00000509962 AKAP12Q02952 1782 aa21.1■□□□□ 0.97
SMAD5-206ENST00000509962 NUP188Q5SRE5 1749 aa21.1■□□□□ 0.97
SMAD5-206ENST00000509962 EXOC5O00471 708 aa21.1■□□□□ 0.97
SMAD5-206ENST00000509962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMAD5-206ENST00000509962 MARCH10Q8NA82 808 aaPredicted RBP21.1■□□□□ 0.97
SMAD5-206ENST00000509962 CARD11Q9BXL7 1154 aa21.1■□□□□ 0.97
SMAD5-206ENST00000509962 SPON1Q9HCB6 807 aa21.09■□□□□ 0.97
SMAD5-206ENST00000509962 RGPD5Q99666 1765 aa21.08■□□□□ 0.97
SMAD5-206ENST00000509962 KCNQ2O43526 872 aa21.08■□□□□ 0.97
SMAD5-206ENST00000509962 TMC1Q8TDI8 760 aa21.08■□□□□ 0.97
SMAD5-206ENST00000509962 PPP1R1BQ9UD71 204 aaPredicted RBP21.08■□□□□ 0.97
SMAD5-206ENST00000509962 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
SMAD5-206ENST00000509962 SBF2Q86WG5 1849 aa21.07■□□□□ 0.96
SMAD5-206ENST00000509962 PTF1AQ7RTS3 328 aa21.07■□□□□ 0.96
SMAD5-206ENST00000509962 LRRC37A3O60309 1634 aa21.07■□□□□ 0.96
SMAD5-206ENST00000509962 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
SMAD5-206ENST00000509962 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
SMAD5-206ENST00000509962 SBNO2Q9Y2G9 1366 aa21.04■□□□□ 0.96
SMAD5-206ENST00000509962 NME9Q86XW9 330 aa21.03■□□□□ 0.96
SMAD5-206ENST00000509962 SLC12A5Q9H2X9 1139 aa21.03■□□□□ 0.96
SMAD5-206ENST00000509962 USP31Q70CQ4 1352 aa21.02■□□□□ 0.96
SMAD5-206ENST00000509962 DCAF8L1A6NGE4 600 aa21.02■□□□□ 0.96
SMAD5-206ENST00000509962 PROM2Q8N271 834 aa21.02■□□□□ 0.96
SMAD5-206ENST00000509962 NLRP2Q9NX02 1062 aa21.02■□□□□ 0.96
SMAD5-206ENST00000509962 TERF2IPQ9NYB0 399 aa21.02■□□□□ 0.96
SMAD5-206ENST00000509962 BCL9O00512 1426 aa21.02■□□□□ 0.96
SMAD5-206ENST00000509962 NFAT5O94916 1531 aa21.01■□□□□ 0.95
SMAD5-206ENST00000509962 WNK3Q9BYP7 1800 aa21.01■□□□□ 0.95
SMAD5-206ENST00000509962 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
SMAD5-206ENST00000509962 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
SMAD5-206ENST00000509962 MON2Q7Z3U7 1717 aa21■□□□□ 0.95
SMAD5-206ENST00000509962 TONSLQ96HA7 1378 aa20.99■□□□□ 0.95
SMAD5-206ENST00000509962 TXNRD1Q16881 649 aa20.99■□□□□ 0.95
SMAD5-206ENST00000509962 ANO8Q9HCE9 1232 aaPredicted RBP20.99■□□□□ 0.95
SMAD5-206ENST00000509962 PUS7Q96PZ0 661 aaKnown RBP20.98■□□□□ 0.95
SMAD5-206ENST00000509962 IL2RBP14784 551 aa20.97■□□□□ 0.95
SMAD5-206ENST00000509962 STK32BQ9NY57 414 aa20.97■□□□□ 0.95
SMAD5-206ENST00000509962 ABCC6O95255 1503 aa20.97■□□□□ 0.95
SMAD5-206ENST00000509962 ERBB3P21860 1342 aa20.97■□□□□ 0.95
SMAD5-206ENST00000509962 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
SMAD5-206ENST00000509962 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
SMAD5-206ENST00000509962 ACSBG1Q96GR2 724 aa20.95■□□□□ 0.94
SMAD5-206ENST00000509962 EDC4Q6P2E9 1401 aaKnown RBP20.95■□□□□ 0.94
SMAD5-206ENST00000509962 SLC15A2Q16348 729 aa20.94■□□□□ 0.94
SMAD5-206ENST00000509962 PDGFDQ9GZP0 370 aaPredicted RBP20.94■□□□□ 0.94
SMAD5-206ENST00000509962 SLC24A1O60721 1099 aa20.93■□□□□ 0.94
SMAD5-206ENST00000509962 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
SMAD5-206ENST00000509962 YY1P25490 414 aa20.93■□□□□ 0.94
SMAD5-206ENST00000509962 NINLQ9Y2I6 1382 aa20.93■□□□□ 0.94
SMAD5-206ENST00000509962 TNS2Q63HR2 1409 aa20.93■□□□□ 0.94
SMAD5-206ENST00000509962 ATF5Q9Y2D1 282 aaPredicted RBP20.92■□□□□ 0.94
SMAD5-206ENST00000509962 LTN1O94822 1766 aa20.92■□□□□ 0.94
SMAD5-206ENST00000509962 A0A1W2PP64 1363 aa20.91■□□□□ 0.94
SMAD5-206ENST00000509962 USP54Q70EL1 1684 aa20.91■□□□□ 0.94
SMAD5-206ENST00000509962 IP6K1Q92551 441 aa20.91■□□□□ 0.94
SMAD5-206ENST00000509962 ST20-MTHFSA0A0A6YYL1 179 aa20.9■□□□□ 0.94
SMAD5-206ENST00000509962 KAT6BQ8WYB5 2073 aa20.9■□□□□ 0.94
SMAD5-206ENST00000509962 LTV1Q96GA3 475 aaPredicted RBP20.89■□□□□ 0.93
SMAD5-206ENST00000509962 COG3Q96JB2 828 aa20.89■□□□□ 0.93
SMAD5-206ENST00000509962 CASZ1Q86V15 1759 aa20.88■□□□□ 0.93
SMAD5-206ENST00000509962 DDX54Q8TDD1 881 aaKnown RBP20.87■□□□□ 0.93
SMAD5-206ENST00000509962 TESK2Q96S53 571 aa20.87■□□□□ 0.93
SMAD5-206ENST00000509962 PTGER2P43116 358 aa20.86■□□□□ 0.93
SMAD5-206ENST00000509962 AMPHP49418 695 aa20.85■□□□□ 0.93
SMAD5-206ENST00000509962 MTFR1LQ9H019 292 aa20.85■□□□□ 0.93
SMAD5-206ENST00000509962 NHSQ6T4R5 1651 aa20.85■□□□□ 0.93
SMAD5-206ENST00000509962 MAP3K19Q56UN5 1328 aa20.81■□□□□ 0.92
SMAD5-206ENST00000509962 FBLN1P23142 703 aa20.81■□□□□ 0.92
SMAD5-206ENST00000509962 HOXC9P31274 260 aa20.81■□□□□ 0.92
SMAD5-206ENST00000509962 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
SMAD5-206ENST00000509962 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
SMAD5-206ENST00000509962 FHDC1Q9C0D6 1143 aaPredicted RBP20.8■□□□□ 0.92
SMAD5-206ENST00000509962 BTAF1O14981 1849 aa20.8■□□□□ 0.92
SMAD5-206ENST00000509962 TMF1P82094 1093 aa20.79■□□□□ 0.92
SMAD5-206ENST00000509962 LRRC4BQ9NT99 713 aa20.79■□□□□ 0.92
SMAD5-206ENST00000509962 SLC27A3Q5K4L6 730 aa20.78■□□□□ 0.92
SMAD5-206ENST00000509962 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
SMAD5-206ENST00000509962 ARXQ96QS3 562 aa20.78■□□□□ 0.92
SMAD5-206ENST00000509962 PRIM1P49642 420 aaKnown RBP20.77■□□□□ 0.92
SMAD5-206ENST00000509962 SGIP1Q9BQI5 828 aa20.77■□□□□ 0.92
SMAD5-206ENST00000509962 MYOM1P52179 1685 aa20.77■□□□□ 0.91
SMAD5-206ENST00000509962 FAM208AQ9UK61 1670 aaKnown RBP20.77■□□□□ 0.91
SMAD5-206ENST00000509962 ANKRD36BQ8N2N9 1353 aa20.76■□□□□ 0.91
SMAD5-206ENST00000509962 FYB1O15117 783 aa20.76■□□□□ 0.91
SMAD5-206ENST00000509962 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
SMAD5-206ENST00000509962 GGNBP2Q9H3C7 697 aa20.75■□□□□ 0.91
SMAD5-206ENST00000509962 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
SMAD5-206ENST00000509962 SLC16A10Q8TF71 515 aa20.74■□□□□ 0.91
SMAD5-206ENST00000509962 AKT1S1Q96B36 256 aa20.74■□□□□ 0.91
SMAD5-206ENST00000509962 TRIM26Q12899 539 aaPredicted RBP20.73■□□□□ 0.91
SMAD5-206ENST00000509962 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
SMAD5-206ENST00000509962 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms