RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
CYSTM1-204ENST00000509789 CPDO75976 1380 aa18.58■□□□□ 0.57
CYSTM1-204ENST00000509789 IP6K1Q92551 441 aa18.58■□□□□ 0.56
CYSTM1-204ENST00000509789 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
CYSTM1-204ENST00000509789 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
CYSTM1-204ENST00000509789 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
CYSTM1-204ENST00000509789 SPATA31A6Q5VVP1 1343 aa18.57■□□□□ 0.56
CYSTM1-204ENST00000509789 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
CYSTM1-204ENST00000509789 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
CYSTM1-204ENST00000509789 INSRP06213 1382 aa18.56■□□□□ 0.56
CYSTM1-204ENST00000509789 FLT4P35916 1363 aa18.56■□□□□ 0.56
CYSTM1-204ENST00000509789 PHRF1Q9P1Y6 1649 aaKnown RBP18.56■□□□□ 0.56
CYSTM1-204ENST00000509789 HOXC9P31274 260 aa18.56■□□□□ 0.56
CYSTM1-204ENST00000509789 SHPRHQ149N8 1683 aa18.56■□□□□ 0.56
CYSTM1-204ENST00000509789 CHRNA2Q15822 529 aa18.55■□□□□ 0.56
CYSTM1-204ENST00000509789 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
CYSTM1-204ENST00000509789 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
CYSTM1-204ENST00000509789 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
CYSTM1-204ENST00000509789 CDK12Q9NYV4 1490 aaPredicted RBP18.54■□□□□ 0.56
CYSTM1-204ENST00000509789 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
CYSTM1-204ENST00000509789 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
CYSTM1-204ENST00000509789 ADAMTS2O95450 1211 aa18.54■□□□□ 0.56
CYSTM1-204ENST00000509789 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.56
CYSTM1-204ENST00000509789 ABCA3Q99758 1704 aa18.52■□□□□ 0.55
CYSTM1-204ENST00000509789 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
CYSTM1-204ENST00000509789 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
CYSTM1-204ENST00000509789 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
CYSTM1-204ENST00000509789 LTN1O94822 1766 aa18.5■□□□□ 0.55
CYSTM1-204ENST00000509789 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
CYSTM1-204ENST00000509789 IL13P35225 146 aa18.5■□□□□ 0.55
CYSTM1-204ENST00000509789 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
CYSTM1-204ENST00000509789 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
CYSTM1-204ENST00000509789 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
CYSTM1-204ENST00000509789 ANKRD24Q8TF21 1146 aa18.49■□□□□ 0.55
CYSTM1-204ENST00000509789 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
CYSTM1-204ENST00000509789 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
CYSTM1-204ENST00000509789 EVA1CP58658 441 aa18.48■□□□□ 0.55
CYSTM1-204ENST00000509789 ABCC6O95255 1503 aa18.48■□□□□ 0.55
CYSTM1-204ENST00000509789 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
CYSTM1-204ENST00000509789 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
CYSTM1-204ENST00000509789 FAM9BQ8IZU0 186 aa18.47■□□□□ 0.55
CYSTM1-204ENST00000509789 NGLY1Q96IV0 654 aa18.47■□□□□ 0.55
CYSTM1-204ENST00000509789 CSB-PGBD3P0DP91 1061 aa18.46■□□□□ 0.55
CYSTM1-204ENST00000509789 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
CYSTM1-204ENST00000509789 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
CYSTM1-204ENST00000509789 C8orf37Q96NL8 207 aa18.45■□□□□ 0.54
CYSTM1-204ENST00000509789 ERBB3P21860 1342 aa18.45■□□□□ 0.54
CYSTM1-204ENST00000509789 COL18A1P39060 1754 aa18.45■□□□□ 0.54
CYSTM1-204ENST00000509789 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
CYSTM1-204ENST00000509789 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
CYSTM1-204ENST00000509789 COL14A1Q05707 1796 aaKnown RBP18.44■□□□□ 0.54
CYSTM1-204ENST00000509789 EYA1Q99502 592 aa18.43■□□□□ 0.54
CYSTM1-204ENST00000509789 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
CYSTM1-204ENST00000509789 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
CYSTM1-204ENST00000509789 LRP6O75581 1613 aa18.42■□□□□ 0.54
CYSTM1-204ENST00000509789 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
CYSTM1-204ENST00000509789 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
CYSTM1-204ENST00000509789 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
CYSTM1-204ENST00000509789 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
CYSTM1-204ENST00000509789 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
CYSTM1-204ENST00000509789 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
CYSTM1-204ENST00000509789 FCHSD2O94868 740 aa18.4■□□□□ 0.54
CYSTM1-204ENST00000509789 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
CYSTM1-204ENST00000509789 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
CYSTM1-204ENST00000509789 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
CYSTM1-204ENST00000509789 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
CYSTM1-204ENST00000509789 COL5A2P05997 1499 aaPredicted RBP18.39■□□□□ 0.54
CYSTM1-204ENST00000509789 HMOX1P09601 288 aa18.39■□□□□ 0.53
CYSTM1-204ENST00000509789 LARP1Q6PKG0 1096 aaKnown RBP18.39■□□□□ 0.53
CYSTM1-204ENST00000509789 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
CYSTM1-204ENST00000509789 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
CYSTM1-204ENST00000509789 SLIT2O94813 1529 aa18.38■□□□□ 0.53
CYSTM1-204ENST00000509789 NEFMP07197 916 aa18.37■□□□□ 0.53
CYSTM1-204ENST00000509789 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
CYSTM1-204ENST00000509789 USP21Q9UK80 565 aa18.37■□□□□ 0.53
CYSTM1-204ENST00000509789 AEBP1Q8IUX7 1158 aa18.36■□□□□ 0.53
CYSTM1-204ENST00000509789 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
CYSTM1-204ENST00000509789 AFF2P51816 1311 aa18.35■□□□□ 0.53
CYSTM1-204ENST00000509789 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
CYSTM1-204ENST00000509789 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
CYSTM1-204ENST00000509789 PLCH1Q4KWH8 1693 aa18.34■□□□□ 0.53
CYSTM1-204ENST00000509789 CRB1P82279 1406 aa18.34■□□□□ 0.53
CYSTM1-204ENST00000509789 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
CYSTM1-204ENST00000509789 CCDC146Q8IYE0 955 aa18.34■□□□□ 0.53
CYSTM1-204ENST00000509789 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
CYSTM1-204ENST00000509789 KDRP35968 1356 aa18.33■□□□□ 0.53
CYSTM1-204ENST00000509789 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.53
CYSTM1-204ENST00000509789 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.52
CYSTM1-204ENST00000509789 VPS72Q15906 364 aa18.33■□□□□ 0.52
CYSTM1-204ENST00000509789 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
CYSTM1-204ENST00000509789 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.52
CYSTM1-204ENST00000509789 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
CYSTM1-204ENST00000509789 PLEKHF1Q96S99 279 aa18.32■□□□□ 0.52
CYSTM1-204ENST00000509789 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
CYSTM1-204ENST00000509789 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
CYSTM1-204ENST00000509789 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
CYSTM1-204ENST00000509789 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
CYSTM1-204ENST00000509789 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
CYSTM1-204ENST00000509789 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
CYSTM1-204ENST00000509789 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms