RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 SIRT1Q96EB6 747 aa7.42□□□□□ -1.22
HTT-206ENST00000509618 C14orf93Q9H972 538 aaKnown RBP7.42□□□□□ -1.22
HTT-206ENST00000509618 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
HTT-206ENST00000509618 CPDO75976 1380 aa7.42□□□□□ -1.22
HTT-206ENST00000509618 ANKRD30BQ9BXX2 1392 aa7.42□□□□□ -1.22
HTT-206ENST00000509618 CRB1P82279 1406 aa7.42□□□□□ -1.22
HTT-206ENST00000509618 KCNQ4P56696 695 aa7.41□□□□□ -1.22
HTT-206ENST00000509618 DNAJC5GQ8N7S2 189 aa7.41□□□□□ -1.22
HTT-206ENST00000509618 NGDNQ8NEJ9 315 aaKnown RBP7.41□□□□□ -1.22
HTT-206ENST00000509618 TOPAZ1Q8N9V7 1692 aa7.41□□□□□ -1.22
HTT-206ENST00000509618 TUBGCP6Q96RT7 1819 aa7.41□□□□□ -1.22
HTT-206ENST00000509618 KIF3CO14782 793 aa7.4□□□□□ -1.22
HTT-206ENST00000509618 ACSBG1Q96GR2 724 aa7.4□□□□□ -1.22
HTT-206ENST00000509618 SLC4A1APQ9BWU0 796 aaKnown RBP7.4□□□□□ -1.22
HTT-206ENST00000509618 WWC3Q9ULE0 1092 aa7.4□□□□□ -1.22
HTT-206ENST00000509618 TRAK1Q9UPV9 953 aa7.4□□□□□ -1.22
HTT-206ENST00000509618 AATKQ6ZMQ8 1374 aa7.4□□□□□ -1.22
HTT-206ENST00000509618 BCL9O00512 1426 aa7.4□□□□□ -1.22
HTT-206ENST00000509618 COL24A1Q17RW2 1714 aa7.4□□□□□ -1.23
HTT-206ENST00000509618 PNPLA7Q6ZV29 1317 aa7.39□□□□□ -1.23
HTT-206ENST00000509618 ZBTB7CA1YPR0 619 aa7.39□□□□□ -1.23
HTT-206ENST00000509618 WASLO00401 505 aaPredicted RBP7.39□□□□□ -1.23
HTT-206ENST00000509618 DDB1Q16531 1140 aa7.39□□□□□ -1.23
HTT-206ENST00000509618 PPP4R3CPQ6ZMV5 832 aa7.39□□□□□ -1.23
HTT-206ENST00000509618 POGKQ9P215 609 aa7.39□□□□□ -1.23
HTT-206ENST00000509618 AXIN2Q9Y2T1 843 aa7.39□□□□□ -1.23
HTT-206ENST00000509618 COL18A1P39060 1754 aa7.38□□□□□ -1.23
HTT-206ENST00000509618 NHSQ6T4R5 1651 aa7.38□□□□□ -1.23
HTT-206ENST00000509618 POLR3AO14802 1390 aaPredicted RBP7.38□□□□□ -1.23
HTT-206ENST00000509618 SLC34A2O95436 690 aa7.38□□□□□ -1.23
HTT-206ENST00000509618 AKT1S1Q96B36 256 aa7.38□□□□□ -1.23
HTT-206ENST00000509618 GPBP1L1Q9HC44 474 aaPredicted RBP7.38□□□□□ -1.23
HTT-206ENST00000509618 THRAP3Q9Y2W1 955 aaKnown RBP7.38□□□□□ -1.23
HTT-206ENST00000509618 AKAP12Q02952 1782 aa7.38□□□□□ -1.23
HTT-206ENST00000509618 ARHGEF28Q8N1W1 1705 aaKnown RBP7.38□□□□□ -1.23
HTT-206ENST00000509618 ACEP12821 1306 aa7.37□□□□□ -1.23
HTT-206ENST00000509618 GCP02774 474 aa7.37□□□□□ -1.23
HTT-206ENST00000509618 SLIT3O75094 1523 aa7.37□□□□□ -1.23
HTT-206ENST00000509618 TNS2Q63HR2 1409 aa7.36□□□□□ -1.23
HTT-206ENST00000509618 MSL1Q68DK7 614 aa7.36□□□□□ -1.23
HTT-206ENST00000509618 NUDT16Q96DE0 195 aaKnown RBP7.36□□□□□ -1.23
HTT-206ENST00000509618 BTAF1O14981 1849 aa7.36□□□□□ -1.23
HTT-206ENST00000509618 PRELPP51888 382 aa7.35□□□□□ -1.23
HTT-206ENST00000509618 NCBP3Q53F19 620 aaKnown RBP7.35□□□□□ -1.23
HTT-206ENST00000509618 TOM1L2Q6ZVM7 507 aa7.35□□□□□ -1.23
HTT-206ENST00000509618 TNS4Q8IZW8 715 aa7.34□□□□□ -1.23
HTT-206ENST00000509618 ABTB2Q8N961 1025 aa7.34□□□□□ -1.23
HTT-206ENST00000509618 ITSN1Q15811 1721 aa7.34□□□□□ -1.23
HTT-206ENST00000509618 USP6P35125 1406 aa7.34□□□□□ -1.23
HTT-206ENST00000509618 CPSF1Q10570 1443 aaKnown RBP7.34□□□□□ -1.23
HTT-206ENST00000509618 EIF3AQ14152 1382 aaKnown RBP7.33□□□□□ -1.24
HTT-206ENST00000509618 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 ABCC6O95255 1503 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 PIK3C2AO00443 1686 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 SMIM5Q71RC9 77 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 AMIGO3Q86WK7 504 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 TRPM1Q7Z4N2 1603 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 RGPD5Q99666 1765 aa7.33□□□□□ -1.24
HTT-206ENST00000509618 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
HTT-206ENST00000509618 QSER1Q2KHR3 1735 aa7.32□□□□□ -1.24
HTT-206ENST00000509618 WDR90Q96KV7 1748 aa7.32□□□□□ -1.24
HTT-206ENST00000509618 CDK19Q9BWU1 502 aa7.32□□□□□ -1.24
HTT-206ENST00000509618 PPIP5K1Q6PFW1 1433 aa7.32□□□□□ -1.24
HTT-206ENST00000509618 PCNTO95613 3336 aa7.32□□□□□ -1.24
HTT-206ENST00000509618 NSD2O96028 1365 aa7.32□□□□□ -1.24
HTT-206ENST00000509618 C11orf95C9JLR9 678 aaPredicted RBP7.31□□□□□ -1.24
HTT-206ENST00000509618 SOX12O15370 315 aa7.31□□□□□ -1.24
HTT-206ENST00000509618 POLD1P28340 1107 aa7.31□□□□□ -1.24
HTT-206ENST00000509618 APLP1P51693 650 aa7.31□□□□□ -1.24
HTT-206ENST00000509618 COL23A1Q86Y22 540 aaPredicted RBP7.31□□□□□ -1.24
HTT-206ENST00000509618 JMYQ8N9B5 988 aa7.31□□□□□ -1.24
HTT-206ENST00000509618 NMRK2Q9NPI5 230 aa7.31□□□□□ -1.24
HTT-206ENST00000509618 NFAT5O94916 1531 aa7.31□□□□□ -1.24
HTT-206ENST00000509618 PLEKHG3A1L390 1219 aa7.3□□□□□ -1.24
HTT-206ENST00000509618 MSH5O43196 834 aa7.3□□□□□ -1.24
HTT-206ENST00000509618 GRIN3BO60391 1043 aa7.3□□□□□ -1.24
HTT-206ENST00000509618 KLRG1Q96E93 195 aa7.3□□□□□ -1.24
HTT-206ENST00000509618 QRICH2Q9H0J4 1663 aa7.3□□□□□ -1.24
HTT-206ENST00000509618 CICQ96RK0 1608 aaPredicted RBP7.3□□□□□ -1.24
HTT-206ENST00000509618 ERBB3P21860 1342 aa7.29□□□□□ -1.24
HTT-206ENST00000509618 MPHOSPH9Q99550 1183 aa7.29□□□□□ -1.24
HTT-206ENST00000509618 CARD10Q9BWT7 1032 aa7.29□□□□□ -1.24
HTT-206ENST00000509618 TOGARAM1Q9Y4F4 1720 aa7.28□□□□□ -1.24
HTT-206ENST00000509618 ARHGEF25Q86VW2 580 aa7.28□□□□□ -1.24
HTT-206ENST00000509618 NLRP13Q86W25 1043 aa7.28□□□□□ -1.24
HTT-206ENST00000509618 SLC16A10Q8TF71 515 aa7.28□□□□□ -1.24
HTT-206ENST00000509618 TFCP2L1Q9NZI6 479 aa7.28□□□□□ -1.24
HTT-206ENST00000509618 IGSF1Q8N6C5 1336 aa7.27□□□□□ -1.24
HTT-206ENST00000509618 EXOC5O00471 708 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 CSB-PGBD3P0DP91 1061 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 NLRP6P59044 892 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 CABP2Q9NPB3 220 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 KDM2AQ9Y2K7 1162 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 CCDC61Q9Y6R9 512 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 KIAA1551Q9HCM1 1747 aa7.27□□□□□ -1.25
HTT-206ENST00000509618 HSPA1AP0DMV8 641 aaKnown RBP7.26□□□□□ -1.25
HTT-206ENST00000509618 HSPA1BP0DMV9 641 aaKnown RBP7.26□□□□□ -1.25
HTT-206ENST00000509618 DOT1LQ8TEK3 1739 aa7.26□□□□□ -1.25
HTT-206ENST00000509618 CCDC7Q96M83 1385 aa7.25□□□□□ -1.25
HTT-206ENST00000509618 LY75O60449 1722 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms