RNA–Protein interactions for RNA: ENST00000509553.1

SH3TC1-218, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-218ENST00000509553 NWD2Q9ULI1 1742 aa20.85■□□□□ 0.93
SH3TC1-218ENST00000509553 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
SH3TC1-218ENST00000509553 ANP32CO43423 234 aa20.85■□□□□ 0.93
SH3TC1-218ENST00000509553 PRDM11Q9NQV5 511 aa20.85■□□□□ 0.93
SH3TC1-218ENST00000509553 CAMTA1Q9Y6Y1 1673 aa20.85■□□□□ 0.93
SH3TC1-218ENST00000509553 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
SH3TC1-218ENST00000509553 MTHFSP49914 203 aa20.83■□□□□ 0.93
SH3TC1-218ENST00000509553 AMPHP49418 695 aa20.82■□□□□ 0.92
SH3TC1-218ENST00000509553 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
SH3TC1-218ENST00000509553 AXIN2Q9Y2T1 843 aa20.82■□□□□ 0.92
SH3TC1-218ENST00000509553 ABCC6O95255 1503 aa20.82■□□□□ 0.92
SH3TC1-218ENST00000509553 CDK12Q9NYV4 1490 aaPredicted RBP20.81■□□□□ 0.92
SH3TC1-218ENST00000509553 MYBBP1AQ9BQG0 1328 aaKnown RBP20.81■□□□□ 0.92
SH3TC1-218ENST00000509553 C8orf37Q96NL8 207 aa20.81■□□□□ 0.92
SH3TC1-218ENST00000509553 HOXC9P31274 260 aa20.8■□□□□ 0.92
SH3TC1-218ENST00000509553 AFF2P51816 1311 aa20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 HSP90AB2PQ58FF8 381 aa20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 IP6K1Q92551 441 aa20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 RTL1A6NKG5 1358 aa20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 FLT4P35916 1363 aa20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 COL3A1P02461 1466 aaPredicted RBP20.79■□□□□ 0.92
SH3TC1-218ENST00000509553 SLIT2O94813 1529 aa20.78■□□□□ 0.92
SH3TC1-218ENST00000509553 FAM208AQ9UK61 1670 aaKnown RBP20.77■□□□□ 0.92
SH3TC1-218ENST00000509553 COL5A2P05997 1499 aaPredicted RBP20.77■□□□□ 0.92
SH3TC1-218ENST00000509553 KIF24Q5T7B8 1368 aa20.77■□□□□ 0.92
SH3TC1-218ENST00000509553 CCDC184Q52MB2 194 aa20.77■□□□□ 0.92
SH3TC1-218ENST00000509553 NGLY1Q96IV0 654 aa20.77■□□□□ 0.92
SH3TC1-218ENST00000509553 BTG4Q9NY30 223 aa20.77■□□□□ 0.92
SH3TC1-218ENST00000509553 ZNF772Q68DY9 489 aaPredicted RBP20.76■□□□□ 0.91
SH3TC1-218ENST00000509553 MIER1Q8N108 512 aa20.76■□□□□ 0.91
SH3TC1-218ENST00000509553 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
SH3TC1-218ENST00000509553 BLMP54132 1417 aaPredicted RBP20.76■□□□□ 0.91
SH3TC1-218ENST00000509553 RGPD1P0DJD0 1748 aa20.75■□□□□ 0.91
SH3TC1-218ENST00000509553 INSRP06213 1382 aa20.75■□□□□ 0.91
SH3TC1-218ENST00000509553 BCL9LQ86UU0 1499 aa20.74■□□□□ 0.91
SH3TC1-218ENST00000509553 STRN4Q9NRL3 753 aa20.73■□□□□ 0.91
SH3TC1-218ENST00000509553 FNBP4Q8N3X1 1017 aaPredicted RBP20.72■□□□□ 0.91
SH3TC1-218ENST00000509553 ANKRD24Q8TF21 1146 aa20.72■□□□□ 0.91
SH3TC1-218ENST00000509553 WNK3Q9BYP7 1800 aa20.71■□□□□ 0.91
SH3TC1-218ENST00000509553 EIF4A2Q14240 407 aaKnown RBP20.71■□□□□ 0.91
SH3TC1-218ENST00000509553 ERBB3P21860 1342 aa20.71■□□□□ 0.91
SH3TC1-218ENST00000509553 EVA1CP58658 441 aa20.69■□□□□ 0.9
SH3TC1-218ENST00000509553 LARP1Q6PKG0 1096 aaKnown RBP20.69■□□□□ 0.9
SH3TC1-218ENST00000509553 USP21Q9UK80 565 aa20.69■□□□□ 0.9
SH3TC1-218ENST00000509553 IL13P35225 146 aa20.68■□□□□ 0.9
SH3TC1-218ENST00000509553 UNC5CLQ8IV45 518 aa20.68■□□□□ 0.9
SH3TC1-218ENST00000509553 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
SH3TC1-218ENST00000509553 DIAPH1O60610 1272 aaKnown RBP20.67■□□□□ 0.9
SH3TC1-218ENST00000509553 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
SH3TC1-218ENST00000509553 QTRT2Q9H974 415 aaKnown RBP20.67■□□□□ 0.9
SH3TC1-218ENST00000509553 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
SH3TC1-218ENST00000509553 RXRBP28702 533 aa20.66■□□□□ 0.9
SH3TC1-218ENST00000509553 ATRNO75882 1429 aa20.66■□□□□ 0.9
SH3TC1-218ENST00000509553 GLI3P10071 1580 aa20.65■□□□□ 0.9
SH3TC1-218ENST00000509553 CRB1P82279 1406 aa20.65■□□□□ 0.9
SH3TC1-218ENST00000509553 NBPF6Q5VWK0 638 aa20.65■□□□□ 0.9
SH3TC1-218ENST00000509553 USHBP1Q8N6Y0 703 aa20.65■□□□□ 0.9
SH3TC1-218ENST00000509553 NBPF4Q96M43 638 aa20.65■□□□□ 0.9
SH3TC1-218ENST00000509553 MRS2Q9HD23 443 aa20.65■□□□□ 0.9
SH3TC1-218ENST00000509553 TOM1L2Q6ZVM7 507 aa20.64■□□□□ 0.89
SH3TC1-218ENST00000509553 EYA1Q99502 592 aa20.64■□□□□ 0.89
SH3TC1-218ENST00000509553 NLRP2Q9NX02 1062 aa20.64■□□□□ 0.89
SH3TC1-218ENST00000509553 RGS12O14924 1447 aa20.63■□□□□ 0.89
SH3TC1-218ENST00000509553 EP400Q96L91 3159 aa20.63■□□□□ 0.89
SH3TC1-218ENST00000509553 U2SURPO15042 1029 aaKnown RBP20.62■□□□□ 0.89
SH3TC1-218ENST00000509553 USP35Q9P2H5 1018 aa20.62■□□□□ 0.89
SH3TC1-218ENST00000509553 IGSF1Q8N6C5 1336 aa20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 RBM6P78332 1123 aaKnown RBP20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 VPS72Q15906 364 aa20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 AEBP1Q8IUX7 1158 aa20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 CCDC9Q9Y3X0 531 aaKnown RBP20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 PARP4Q9UKK3 1724 aaKnown RBP20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
SH3TC1-218ENST00000509553 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
SH3TC1-218ENST00000509553 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
SH3TC1-218ENST00000509553 CCER2I3L3R5 266 aa20.6■□□□□ 0.89
SH3TC1-218ENST00000509553 SPATA31A1Q5TZJ5 1347 aa20.59■□□□□ 0.89
SH3TC1-218ENST00000509553 HMOX1P09601 288 aa20.59■□□□□ 0.89
SH3TC1-218ENST00000509553 CARD10Q9BWT7 1032 aa20.59■□□□□ 0.89
SH3TC1-218ENST00000509553 SHANK3Q9BYB0 1731 aa20.58■□□□□ 0.89
SH3TC1-218ENST00000509553 TRPC5Q9UL62 973 aaPredicted RBP20.58■□□□□ 0.89
SH3TC1-218ENST00000509553 U2AF1L5P0DN76 240 aaPredicted RBP20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 U2AF1Q01081 240 aaKnown RBP eCLIP20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 SULT6B1Q6IMI4 303 aa20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 PNISRQ8TF01 805 aaKnown RBP20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 NUDCQ9Y266 331 aa20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 BRWD3Q6RI45 1802 aa20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 MEGF6O75095 1541 aa20.57■□□□□ 0.88
SH3TC1-218ENST00000509553 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
SH3TC1-218ENST00000509553 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
SH3TC1-218ENST00000509553 THSD7AQ9UPZ6 1657 aa20.55■□□□□ 0.88
SH3TC1-218ENST00000509553 GJD4Q96KN9 370 aaPredicted RBP20.55■□□□□ 0.88
SH3TC1-218ENST00000509553 LRRC37A3O60309 1634 aa20.55■□□□□ 0.88
SH3TC1-218ENST00000509553 KDRP35968 1356 aa20.55■□□□□ 0.88
SH3TC1-218ENST00000509553 DLG5Q8TDM6 1919 aa20.55■□□□□ 0.88
SH3TC1-218ENST00000509553 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
SH3TC1-218ENST00000509553 TCP11L2Q8N4U5 519 aa20.54■□□□□ 0.88
SH3TC1-218ENST00000509553 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
SH3TC1-218ENST00000509553 DISP2A7MBM2 1401 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms