RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
SDHA-210ENST00000509420 EN1Q05925 392 aaPredicted RBP18.97■□□□□ 0.63
SDHA-210ENST00000509420 NME9Q86XW9 330 aa18.97■□□□□ 0.63
SDHA-210ENST00000509420 PUS7Q96PZ0 661 aaKnown RBP18.97■□□□□ 0.63
SDHA-210ENST00000509420 THRAP3Q9Y2W1 955 aaKnown RBP18.97■□□□□ 0.63
SDHA-210ENST00000509420 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
SDHA-210ENST00000509420 EDC4Q6P2E9 1401 aaKnown RBP18.96■□□□□ 0.63
SDHA-210ENST00000509420 NUP188Q5SRE5 1749 aa18.95■□□□□ 0.62
SDHA-210ENST00000509420 SF3B2Q13435 895 aaKnown RBP18.95■□□□□ 0.62
SDHA-210ENST00000509420 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
SDHA-210ENST00000509420 LRP5O75197 1615 aa18.95■□□□□ 0.62
SDHA-210ENST00000509420 TRIM37O94972 964 aa18.94■□□□□ 0.62
SDHA-210ENST00000509420 BAG6P46379 1132 aa18.94■□□□□ 0.62
SDHA-210ENST00000509420 FAM196AQ6ZSG2 479 aa18.94■□□□□ 0.62
SDHA-210ENST00000509420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.94■□□□□ 0.62
SDHA-210ENST00000509420 ZBTB7CA1YPR0 619 aa18.93■□□□□ 0.62
SDHA-210ENST00000509420 KCNH5Q8NCM2 988 aa18.93■□□□□ 0.62
SDHA-210ENST00000509420 SOX12O15370 315 aa18.92■□□□□ 0.62
SDHA-210ENST00000509420 EZH2Q15910 746 aaKnown RBP18.92■□□□□ 0.62
SDHA-210ENST00000509420 MYOM1P52179 1685 aa18.91■□□□□ 0.62
SDHA-210ENST00000509420 USP47Q96K76 1375 aa18.91■□□□□ 0.62
SDHA-210ENST00000509420 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
SDHA-210ENST00000509420 RGPD3A6NKT7 1758 aaPredicted RBP18.9■□□□□ 0.62
SDHA-210ENST00000509420 RGPD4Q7Z3J3 1758 aa18.9■□□□□ 0.62
SDHA-210ENST00000509420 PTF1AQ7RTS3 328 aa18.89■□□□□ 0.61
SDHA-210ENST00000509420 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
SDHA-210ENST00000509420 NINLQ9Y2I6 1382 aa18.89■□□□□ 0.61
SDHA-210ENST00000509420 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
SDHA-210ENST00000509420 PDE3BQ13370 1112 aa18.88■□□□□ 0.61
SDHA-210ENST00000509420 TOM1L2Q6ZVM7 507 aa18.88■□□□□ 0.61
SDHA-210ENST00000509420 OVOS2A0A0G2JMS6 1433 aa18.88■□□□□ 0.61
SDHA-210ENST00000509420 BCL9O00512 1426 aa18.88■□□□□ 0.61
SDHA-210ENST00000509420 ERBB3P21860 1342 aa18.87■□□□□ 0.61
SDHA-210ENST00000509420 MARCH10Q8NA82 808 aaPredicted RBP18.87■□□□□ 0.61
SDHA-210ENST00000509420 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
SDHA-210ENST00000509420 HDGFL2Q7Z4V5 671 aaPredicted RBP18.86■□□□□ 0.61
SDHA-210ENST00000509420 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
SDHA-210ENST00000509420 APBA3O96018 575 aa18.85■□□□□ 0.61
SDHA-210ENST00000509420 TERF2IPQ9NYB0 399 aa18.85■□□□□ 0.61
SDHA-210ENST00000509420 TNS2Q63HR2 1409 aa18.84■□□□□ 0.61
SDHA-210ENST00000509420 FAM208AQ9UK61 1670 aaKnown RBP18.84■□□□□ 0.61
SDHA-210ENST00000509420 DDB1Q16531 1140 aa18.83■□□□□ 0.6
SDHA-210ENST00000509420 CCDC7Q96M83 1385 aa18.82■□□□□ 0.6
SDHA-210ENST00000509420 FBLN1P23142 703 aa18.82■□□□□ 0.6
SDHA-210ENST00000509420 R3HDM1Q15032 1099 aaKnown RBP18.82■□□□□ 0.6
SDHA-210ENST00000509420 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
SDHA-210ENST00000509420 CLSPNQ9HAW4 1339 aa18.81■□□□□ 0.6
SDHA-210ENST00000509420 NHSQ6T4R5 1651 aa18.8■□□□□ 0.6
SDHA-210ENST00000509420 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
SDHA-210ENST00000509420 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
SDHA-210ENST00000509420 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
SDHA-210ENST00000509420 MAP3K19Q56UN5 1328 aa18.78■□□□□ 0.6
SDHA-210ENST00000509420 CSB-PGBD3P0DP91 1061 aa18.78■□□□□ 0.6
SDHA-210ENST00000509420 PROM2Q8N271 834 aa18.78■□□□□ 0.6
SDHA-210ENST00000509420 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
SDHA-210ENST00000509420 IP6K1Q92551 441 aa18.78■□□□□ 0.6
SDHA-210ENST00000509420 TIMELESSQ9UNS1 1208 aa18.78■□□□□ 0.6
SDHA-210ENST00000509420 FYB1O15117 783 aa18.77■□□□□ 0.6
SDHA-210ENST00000509420 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
SDHA-210ENST00000509420 TMF1P82094 1093 aa18.76■□□□□ 0.59
SDHA-210ENST00000509420 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
SDHA-210ENST00000509420 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
SDHA-210ENST00000509420 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
SDHA-210ENST00000509420 PLSCR1O15162 318 aa18.75■□□□□ 0.59
SDHA-210ENST00000509420 ANO8Q9HCE9 1232 aaPredicted RBP18.75■□□□□ 0.59
SDHA-210ENST00000509420 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
SDHA-210ENST00000509420 HOXC9P31274 260 aa18.74■□□□□ 0.59
SDHA-210ENST00000509420 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
SDHA-210ENST00000509420 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
SDHA-210ENST00000509420 PAPPAQ13219 1627 aa18.74■□□□□ 0.59
SDHA-210ENST00000509420 BTAF1O14981 1849 aa18.73■□□□□ 0.59
SDHA-210ENST00000509420 KCNQ2O43526 872 aa18.73■□□□□ 0.59
SDHA-210ENST00000509420 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
SDHA-210ENST00000509420 EXOC5O00471 708 aa18.72■□□□□ 0.59
SDHA-210ENST00000509420 COG3Q96JB2 828 aa18.72■□□□□ 0.59
SDHA-210ENST00000509420 GGNBP2Q9H3C7 697 aa18.72■□□□□ 0.59
SDHA-210ENST00000509420 MEGF6O75095 1541 aa18.72■□□□□ 0.59
SDHA-210ENST00000509420 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
SDHA-210ENST00000509420 IL2RBP14784 551 aa18.71■□□□□ 0.59
SDHA-210ENST00000509420 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
SDHA-210ENST00000509420 NSD3Q9BZ95 1437 aa18.69■□□□□ 0.58
SDHA-210ENST00000509420 PDGFDQ9GZP0 370 aaPredicted RBP18.68■□□□□ 0.58
SDHA-210ENST00000509420 DOT1LQ8TEK3 1739 aa18.67■□□□□ 0.58
SDHA-210ENST00000509420 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
SDHA-210ENST00000509420 NSD2O96028 1365 aa18.66■□□□□ 0.58
SDHA-210ENST00000509420 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
SDHA-210ENST00000509420 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
SDHA-210ENST00000509420 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
SDHA-210ENST00000509420 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
SDHA-210ENST00000509420 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
SDHA-210ENST00000509420 CDCA8Q53HL2 280 aa18.64■□□□□ 0.57
SDHA-210ENST00000509420 AMPHP49418 695 aa18.63■□□□□ 0.57
SDHA-210ENST00000509420 HSP90AB2PQ58FF8 381 aa18.63■□□□□ 0.57
SDHA-210ENST00000509420 INSRP06213 1382 aa18.63■□□□□ 0.57
SDHA-210ENST00000509420 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
SDHA-210ENST00000509420 LY75O60449 1722 aa18.62■□□□□ 0.57
SDHA-210ENST00000509420 FLT4P35916 1363 aa18.61■□□□□ 0.57
SDHA-210ENST00000509420 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
SDHA-210ENST00000509420 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
SDHA-210ENST00000509420 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms