RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 SH3D19Q5HYK7 790 aa7.34□□□□□ -1.23
SPARCL1-206ENST00000509407 TRMT44Q8IYL2 757 aaKnown RBP7.34□□□□□ -1.23
SPARCL1-206ENST00000509407 ITPKCQ96DU7 683 aa7.34□□□□□ -1.23
SPARCL1-206ENST00000509407 KDM4CQ9H3R0 1056 aa7.34□□□□□ -1.23
SPARCL1-206ENST00000509407 ZFAND3Q9H8U3 227 aa7.34□□□□□ -1.23
SPARCL1-206ENST00000509407 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
SPARCL1-206ENST00000509407 CARD14Q9BXL6 1004 aa7.33□□□□□ -1.24
SPARCL1-206ENST00000509407 H3BM21 787 aa7.32□□□□□ -1.24
SPARCL1-206ENST00000509407 MAN1A2O60476 641 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 BMP2P12643 396 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 VEGFBP49765 207 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 C6orf118Q5T5N4 469 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 PDXDC2PQ6P474 469 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 CCDC116Q8IYX3 515 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 FKBPLQ9UIM3 349 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 EMILIN1Q9Y6C2 1016 aa7.31□□□□□ -1.24
SPARCL1-206ENST00000509407 ZC3H4Q9UPT8 1303 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 PDIA4P13667 645 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 ERFEQ4G0M1 354 aa7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 LINC00528Q8N1L1 170 aa7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 MEIOBQ8N635 442 aa7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 PNMA1Q8ND90 353 aa7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 LRRN4Q8WUT4 740 aa7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 FAM117AQ9C073 453 aa7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
SPARCL1-206ENST00000509407 FAM181BA6NEQ2 426 aa7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 GMPRP36959 345 aa7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 PPP2R2DQ66LE6 453 aa7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 SLC10A4Q96EP9 437 aa7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 TSEN34Q9BSV6 310 aaKnown RBP7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 CHMP4AQ9BY43 222 aa7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
SPARCL1-206ENST00000509407 SOBPA7XYQ1 873 aa7.28□□□□□ -1.24
SPARCL1-206ENST00000509407 AP1G2O75843 785 aa7.28□□□□□ -1.24
SPARCL1-206ENST00000509407 NR6A1Q15406 480 aa7.28□□□□□ -1.24
SPARCL1-206ENST00000509407 ZBTB33Q86T24 672 aa7.28□□□□□ -1.24
SPARCL1-206ENST00000509407 PROCA1Q8NCQ7 364 aaPredicted RBP7.28□□□□□ -1.24
SPARCL1-206ENST00000509407 PTK2Q05397 1052 aa7.27□□□□□ -1.25
SPARCL1-206ENST00000509407 DHX9Q08211 1270 aaKnown RBP7.27□□□□□ -1.25
SPARCL1-206ENST00000509407 PUS7Q96PZ0 661 aaKnown RBP7.26□□□□□ -1.25
SPARCL1-206ENST00000509407 KCTD15Q96SI1 283 aaPredicted RBP7.26□□□□□ -1.25
SPARCL1-206ENST00000509407 GPSM3Q9Y4H4 160 aa7.26□□□□□ -1.25
SPARCL1-206ENST00000509407 ERBB4Q15303 1308 aa7.26□□□□□ -1.25
SPARCL1-206ENST00000509407 IGSF3O75054 1194 aa7.25□□□□□ -1.25
SPARCL1-206ENST00000509407 PPP1R26Q5T8A7 1209 aaPredicted RBP7.25□□□□□ -1.25
SPARCL1-206ENST00000509407 ZSCAN1Q8NBB4 408 aa7.25□□□□□ -1.25
SPARCL1-206ENST00000509407 SOS2Q07890 1332 aaPredicted RBP7.25□□□□□ -1.25
SPARCL1-206ENST00000509407 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
SPARCL1-206ENST00000509407 FBXO31Q5XUX0 539 aaPredicted RBP7.24□□□□□ -1.25
SPARCL1-206ENST00000509407 ZMYND15Q9H091 742 aa7.24□□□□□ -1.25
SPARCL1-206ENST00000509407 USP17L8P0C7I0 530 aa7.23□□□□□ -1.25
SPARCL1-206ENST00000509407 VSIG8P0DPA2 414 aa7.23□□□□□ -1.25
SPARCL1-206ENST00000509407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.23□□□□□ -1.25
SPARCL1-206ENST00000509407 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
SPARCL1-206ENST00000509407 ARID3AQ99856 593 aa7.23□□□□□ -1.25
SPARCL1-206ENST00000509407 TTLL8A6PVC2 850 aa7.22□□□□□ -1.25
SPARCL1-206ENST00000509407 BRD2P25440 801 aaKnown RBP7.22□□□□□ -1.25
SPARCL1-206ENST00000509407 Q6ZVU0 165 aa7.22□□□□□ -1.25
SPARCL1-206ENST00000509407 ADAM32Q8TC27 787 aa7.22□□□□□ -1.25
SPARCL1-206ENST00000509407 DNMT3LQ9UJW3 386 aa7.22□□□□□ -1.25
SPARCL1-206ENST00000509407 PPFIA3O75145 1194 aa7.21□□□□□ -1.26
SPARCL1-206ENST00000509407 RFC5P40937 340 aa7.21□□□□□ -1.26
SPARCL1-206ENST00000509407 UBE2Q2Q8WVN8 375 aa7.21□□□□□ -1.26
SPARCL1-206ENST00000509407 PCMTD1Q96MG8 357 aaPredicted RBP7.21□□□□□ -1.26
SPARCL1-206ENST00000509407 GOPCQ9HD26 462 aa7.21□□□□□ -1.26
SPARCL1-206ENST00000509407 CBLBQ13191 982 aa7.2□□□□□ -1.26
SPARCL1-206ENST00000509407 INTS6LQ5JSJ4 861 aaKnown RBP7.2□□□□□ -1.26
SPARCL1-206ENST00000509407 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
SPARCL1-206ENST00000509407 HMX1Q9NP08 348 aaPredicted RBP7.2□□□□□ -1.26
SPARCL1-206ENST00000509407 SPINT1O43278 529 aa7.19□□□□□ -1.26
SPARCL1-206ENST00000509407 DZIP3Q86Y13 1208 aaKnown RBP7.19□□□□□ -1.26
SPARCL1-206ENST00000509407 EPS8L1Q8TE68 723 aa7.19□□□□□ -1.26
SPARCL1-206ENST00000509407 OCSTAMPQ9BR26 566 aa7.19□□□□□ -1.26
SPARCL1-206ENST00000509407 TMEM259Q4ZIN3 620 aa7.18□□□□□ -1.26
SPARCL1-206ENST00000509407 FIGNL2A6NMB9 653 aa7.17□□□□□ -1.26
SPARCL1-206ENST00000509407 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
SPARCL1-206ENST00000509407 PTSQ03393 145 aa7.17□□□□□ -1.26
SPARCL1-206ENST00000509407 RAB15P59190 212 aa7.16□□□□□ -1.26
SPARCL1-206ENST00000509407 RELBQ01201 579 aa7.16□□□□□ -1.26
SPARCL1-206ENST00000509407 NEUROD2Q15784 382 aa7.16□□□□□ -1.26
SPARCL1-206ENST00000509407 ZNF784Q8NCA9 323 aaPredicted RBP7.15□□□□□ -1.26
SPARCL1-206ENST00000509407 AGBL1Q96MI9 1066 aa7.15□□□□□ -1.26
SPARCL1-206ENST00000509407 POLMQ9NP87 494 aaPredicted RBP7.15□□□□□ -1.26
SPARCL1-206ENST00000509407 SEPT12Q8IYM1 358 aa7.14□□□□□ -1.27
SPARCL1-206ENST00000509407 CCDC155Q8N6L0 562 aa7.14□□□□□ -1.27
SPARCL1-206ENST00000509407 INSM2Q96T92 566 aaPredicted RBP7.14□□□□□ -1.27
SPARCL1-206ENST00000509407 TMPRSS4Q9NRS4 437 aa7.14□□□□□ -1.27
SPARCL1-206ENST00000509407 ESPNB1AK53 854 aa7.13□□□□□ -1.27
SPARCL1-206ENST00000509407 ERVH48-1M5A8F1 160 aa7.13□□□□□ -1.27
SPARCL1-206ENST00000509407 ADH1AP07327 375 aa7.13□□□□□ -1.27
SPARCL1-206ENST00000509407 CTSOP43234 321 aaPredicted RBP7.13□□□□□ -1.27
SPARCL1-206ENST00000509407 IL27Q8NEV9 243 aa7.13□□□□□ -1.27
SPARCL1-206ENST00000509407 TRIM34Q9BYJ4 488 aa7.13□□□□□ -1.27
SPARCL1-206ENST00000509407 ZBBXA8MT70 800 aa7.12□□□□□ -1.27
SPARCL1-206ENST00000509407 KCTD17Q8N5Z5 321 aa7.12□□□□□ -1.27
SPARCL1-206ENST00000509407 NANOS1Q8WY41 292 aaKnown RBP7.12□□□□□ -1.27
SPARCL1-206ENST00000509407 ZNF395Q9H8N7 513 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms