RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PARD3Q8TEW0 1356 aa20.68■□□□□ 0.9
HMGCL-208ENST00000509389 TOM1L2Q6ZVM7 507 aa20.68■□□□□ 0.9
HMGCL-208ENST00000509389 ARHGEF25Q86VW2 580 aa20.68■□□□□ 0.9
HMGCL-208ENST00000509389 KCNH5Q8NCM2 988 aa20.68■□□□□ 0.9
HMGCL-208ENST00000509389 MON2Q7Z3U7 1717 aa20.67■□□□□ 0.9
HMGCL-208ENST00000509389 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
HMGCL-208ENST00000509389 RREB1Q92766 1687 aa20.66■□□□□ 0.9
HMGCL-208ENST00000509389 SOX12O15370 315 aa20.66■□□□□ 0.9
HMGCL-208ENST00000509389 LRRC37A3O60309 1634 aa20.66■□□□□ 0.9
HMGCL-208ENST00000509389 PEAK1Q9H792 1746 aa20.65■□□□□ 0.9
HMGCL-208ENST00000509389 WNK3Q9BYP7 1800 aa20.65■□□□□ 0.9
HMGCL-208ENST00000509389 NFAT5O94916 1531 aa20.65■□□□□ 0.9
HMGCL-208ENST00000509389 TONSLQ96HA7 1378 aa20.64■□□□□ 0.9
HMGCL-208ENST00000509389 C11orf95C9JLR9 678 aaPredicted RBP20.63■□□□□ 0.89
HMGCL-208ENST00000509389 DDB1Q16531 1140 aa20.63■□□□□ 0.89
HMGCL-208ENST00000509389 NUP188Q5SRE5 1749 aa20.63■□□□□ 0.89
HMGCL-208ENST00000509389 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
HMGCL-208ENST00000509389 OVOS2A0A0J9YW53 1432 aa20.63■□□□□ 0.89
HMGCL-208ENST00000509389 OVOS2Q6IE36 1432 aa20.63■□□□□ 0.89
HMGCL-208ENST00000509389 CD163L1Q9NR16 1453 aa20.62■□□□□ 0.89
HMGCL-208ENST00000509389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.62■□□□□ 0.89
HMGCL-208ENST00000509389 SBF2Q86WG5 1849 aa20.62■□□□□ 0.89
HMGCL-208ENST00000509389 CSB-PGBD3P0DP91 1061 aa20.6■□□□□ 0.89
HMGCL-208ENST00000509389 TMC1Q8TDI8 760 aa20.6■□□□□ 0.89
HMGCL-208ENST00000509389 CARD10Q9BWT7 1032 aa20.6■□□□□ 0.89
HMGCL-208ENST00000509389 USP54Q70EL1 1684 aa20.6■□□□□ 0.89
HMGCL-208ENST00000509389 USP31Q70CQ4 1352 aa20.6■□□□□ 0.89
HMGCL-208ENST00000509389 CDCA7Q9BWT1 371 aaPredicted RBP20.59■□□□□ 0.89
HMGCL-208ENST00000509389 NME9Q86XW9 330 aa20.59■□□□□ 0.89
HMGCL-208ENST00000509389 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
HMGCL-208ENST00000509389 ABCC6O95255 1503 aa20.58■□□□□ 0.89
HMGCL-208ENST00000509389 NBPF14Q5TI25 921 aa20.58■□□□□ 0.88
HMGCL-208ENST00000509389 HDGFL2Q7Z4V5 671 aaPredicted RBP20.58■□□□□ 0.88
HMGCL-208ENST00000509389 MARCH10Q8NA82 808 aaPredicted RBP20.58■□□□□ 0.88
HMGCL-208ENST00000509389 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
HMGCL-208ENST00000509389 PUS7Q96PZ0 661 aaKnown RBP20.55■□□□□ 0.88
HMGCL-208ENST00000509389 RGPD3A6NKT7 1758 aaPredicted RBP20.55■□□□□ 0.88
HMGCL-208ENST00000509389 LTN1O94822 1766 aa20.55■□□□□ 0.88
HMGCL-208ENST00000509389 RGPD4Q7Z3J3 1758 aa20.55■□□□□ 0.88
HMGCL-208ENST00000509389 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
HMGCL-208ENST00000509389 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
HMGCL-208ENST00000509389 PLSCR1O15162 318 aa20.54■□□□□ 0.88
HMGCL-208ENST00000509389 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
HMGCL-208ENST00000509389 BCL9O00512 1426 aa20.53■□□□□ 0.88
HMGCL-208ENST00000509389 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
HMGCL-208ENST00000509389 TERF2IPQ9NYB0 399 aa20.53■□□□□ 0.88
HMGCL-208ENST00000509389 EXOC5O00471 708 aa20.52■□□□□ 0.88
HMGCL-208ENST00000509389 TESK2Q96S53 571 aa20.52■□□□□ 0.88
HMGCL-208ENST00000509389 ERBB3P21860 1342 aa20.5■□□□□ 0.87
HMGCL-208ENST00000509389 ST20-MTHFSA0A0A6YYL1 179 aa20.5■□□□□ 0.87
HMGCL-208ENST00000509389 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
HMGCL-208ENST00000509389 TNS2Q63HR2 1409 aa20.48■□□□□ 0.87
HMGCL-208ENST00000509389 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
HMGCL-208ENST00000509389 PROM2Q8N271 834 aa20.46■□□□□ 0.87
HMGCL-208ENST00000509389 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
HMGCL-208ENST00000509389 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
HMGCL-208ENST00000509389 IL2RBP14784 551 aa20.45■□□□□ 0.86
HMGCL-208ENST00000509389 KCNQ2O43526 872 aa20.44■□□□□ 0.86
HMGCL-208ENST00000509389 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
HMGCL-208ENST00000509389 SPON1Q9HCB6 807 aa20.44■□□□□ 0.86
HMGCL-208ENST00000509389 IP6K1Q92551 441 aa20.43■□□□□ 0.86
HMGCL-208ENST00000509389 NHSQ6T4R5 1651 aa20.42■□□□□ 0.86
HMGCL-208ENST00000509389 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
HMGCL-208ENST00000509389 COG3Q96JB2 828 aa20.41■□□□□ 0.86
HMGCL-208ENST00000509389 CASZ1Q86V15 1759 aa20.4■□□□□ 0.86
HMGCL-208ENST00000509389 ACSBG1Q96GR2 724 aa20.4■□□□□ 0.86
HMGCL-208ENST00000509389 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.85
HMGCL-208ENST00000509389 FAM208AQ9UK61 1670 aaKnown RBP20.39■□□□□ 0.85
HMGCL-208ENST00000509389 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
HMGCL-208ENST00000509389 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
HMGCL-208ENST00000509389 PDGFDQ9GZP0 370 aaPredicted RBP20.38■□□□□ 0.85
HMGCL-208ENST00000509389 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
HMGCL-208ENST00000509389 MAP3K19Q56UN5 1328 aa20.38■□□□□ 0.85
HMGCL-208ENST00000509389 USP47Q96K76 1375 aa20.38■□□□□ 0.85
HMGCL-208ENST00000509389 FBLN1P23142 703 aa20.37■□□□□ 0.85
HMGCL-208ENST00000509389 TMF1P82094 1093 aa20.37■□□□□ 0.85
HMGCL-208ENST00000509389 STK32BQ9NY57 414 aa20.36■□□□□ 0.85
HMGCL-208ENST00000509389 BTAF1O14981 1849 aa20.35■□□□□ 0.85
HMGCL-208ENST00000509389 HOXC9P31274 260 aa20.35■□□□□ 0.85
HMGCL-208ENST00000509389 AMPHP49418 695 aa20.34■□□□□ 0.85
HMGCL-208ENST00000509389 SLC15A2Q16348 729 aa20.34■□□□□ 0.85
HMGCL-208ENST00000509389 RGPD2P0DJD1 1756 aa20.34■□□□□ 0.85
HMGCL-208ENST00000509389 FYB1O15117 783 aa20.33■□□□□ 0.84
HMGCL-208ENST00000509389 ZBTB7AO95365 584 aa20.33■□□□□ 0.84
HMGCL-208ENST00000509389 DDX54Q8TDD1 881 aaKnown RBP20.32■□□□□ 0.84
HMGCL-208ENST00000509389 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
HMGCL-208ENST00000509389 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
HMGCL-208ENST00000509389 RRS1Q15050 365 aaKnown RBP20.3■□□□□ 0.84
HMGCL-208ENST00000509389 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
HMGCL-208ENST00000509389 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
HMGCL-208ENST00000509389 ATF5Q9Y2D1 282 aaPredicted RBP20.29■□□□□ 0.84
HMGCL-208ENST00000509389 KIF20BQ96Q89 1820 aa20.28■□□□□ 0.84
HMGCL-208ENST00000509389 PTGER2P43116 358 aa20.28■□□□□ 0.84
HMGCL-208ENST00000509389 MYOM1P52179 1685 aa20.28■□□□□ 0.84
HMGCL-208ENST00000509389 SHANK3Q9BYB0 1731 aa20.27■□□□□ 0.84
HMGCL-208ENST00000509389 MEGF6O75095 1541 aa20.27■□□□□ 0.83
HMGCL-208ENST00000509389 NBPF6Q5VWK0 638 aa20.26■□□□□ 0.83
HMGCL-208ENST00000509389 ZCRB1Q8TBF4 217 aaKnown RBP20.26■□□□□ 0.83
HMGCL-208ENST00000509389 NBPF4Q96M43 638 aa20.26■□□□□ 0.83
HMGCL-208ENST00000509389 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms