RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 PHF12Q96QT6 1004 aa10.31□□□□□ -0.76
TRIO-213ENST00000509354 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
TRIO-213ENST00000509354 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
TRIO-213ENST00000509354 ATRNO75882 1429 aa10.31□□□□□ -0.76
TRIO-213ENST00000509354 NRKQ7Z2Y5 1582 aa10.31□□□□□ -0.76
TRIO-213ENST00000509354 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 ARHGEF10O15013 1369 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 COL14A1Q05707 1796 aaKnown RBP10.3□□□□□ -0.76
TRIO-213ENST00000509354 SLIT2O94813 1529 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 PLCB2Q00722 1185 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 BCL11BQ9C0K0 894 aaPredicted RBP10.3□□□□□ -0.76
TRIO-213ENST00000509354 PIK3C2AO00443 1686 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 PPIP5K1Q6PFW1 1433 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 MON2Q7Z3U7 1717 aa10.3□□□□□ -0.76
TRIO-213ENST00000509354 NGDNQ8NEJ9 315 aaKnown RBP10.29□□□□□ -0.76
TRIO-213ENST00000509354 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
TRIO-213ENST00000509354 USP21Q9UK80 565 aa10.29□□□□□ -0.76
TRIO-213ENST00000509354 PCDHB8Q9UN66 801 aa10.29□□□□□ -0.76
TRIO-213ENST00000509354 POLR3AO14802 1390 aaPredicted RBP10.28□□□□□ -0.76
TRIO-213ENST00000509354 RXRBP28702 533 aa10.28□□□□□ -0.76
TRIO-213ENST00000509354 PSEN1P49768 467 aa10.28□□□□□ -0.76
TRIO-213ENST00000509354 SRPK2P78362 688 aaKnown RBP10.28□□□□□ -0.76
TRIO-213ENST00000509354 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
TRIO-213ENST00000509354 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
TRIO-213ENST00000509354 QTRT2Q9H974 415 aaKnown RBP10.28□□□□□ -0.76
TRIO-213ENST00000509354 ACEP12821 1306 aa10.28□□□□□ -0.76
TRIO-213ENST00000509354 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
TRIO-213ENST00000509354 RBM6P78332 1123 aaKnown RBP10.26□□□□□ -0.77
TRIO-213ENST00000509354 RGPD5Q99666 1765 aa10.25□□□□□ -0.77
TRIO-213ENST00000509354 NUTM2GQ5VZR2 741 aa10.25□□□□□ -0.77
TRIO-213ENST00000509354 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
TRIO-213ENST00000509354 CARD11Q9BXL7 1154 aa10.25□□□□□ -0.77
TRIO-213ENST00000509354 TRPC5Q9UL62 973 aaPredicted RBP10.25□□□□□ -0.77
TRIO-213ENST00000509354 LMO7Q8WWI1 1683 aa10.25□□□□□ -0.77
TRIO-213ENST00000509354 USP6P35125 1406 aa10.24□□□□□ -0.77
TRIO-213ENST00000509354 PLEKHG3A1L390 1219 aa10.24□□□□□ -0.77
TRIO-213ENST00000509354 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
TRIO-213ENST00000509354 EVC2Q86UK5 1308 aa10.23□□□□□ -0.77
TRIO-213ENST00000509354 SBNO2Q9Y2G9 1366 aa10.23□□□□□ -0.77
TRIO-213ENST00000509354 SLIT3O75094 1523 aa10.23□□□□□ -0.77
TRIO-213ENST00000509354 USP54Q70EL1 1684 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
TRIO-213ENST00000509354 UNC5CLQ8IV45 518 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 MS4A3Q96HJ5 214 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 CABP1Q9NZU7 370 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 KIAA0232Q92628 1395 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
TRIO-213ENST00000509354 COL18A1P39060 1754 aa10.21□□□□□ -0.77
TRIO-213ENST00000509354 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.77
TRIO-213ENST00000509354 GJD4Q96KN9 370 aaPredicted RBP10.21□□□□□ -0.77
TRIO-213ENST00000509354 CFAP44Q96MT7 982 aa10.21□□□□□ -0.77
TRIO-213ENST00000509354 USP19O94966 1318 aa10.21□□□□□ -0.78
TRIO-213ENST00000509354 SSH2Q76I76 1423 aa10.21□□□□□ -0.78
TRIO-213ENST00000509354 CD163L1Q9NR16 1453 aa10.21□□□□□ -0.78
TRIO-213ENST00000509354 MYOM1P52179 1685 aa10.21□□□□□ -0.78
TRIO-213ENST00000509354 LTN1O94822 1766 aa10.21□□□□□ -0.78
TRIO-213ENST00000509354 CHRNA2Q15822 529 aa10.2□□□□□ -0.78
TRIO-213ENST00000509354 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRIO-213ENST00000509354 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 CPSF1Q10570 1443 aaKnown RBP10.19□□□□□ -0.78
TRIO-213ENST00000509354 ATAD2Q6PL18 1390 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 TIE1P35590 1138 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 ZC3H6P61129 1189 aaKnown RBP10.19□□□□□ -0.78
TRIO-213ENST00000509354 VPS72Q15906 364 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 PRDM11Q9NQV5 511 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 BTG4Q9NY30 223 aa10.19□□□□□ -0.78
TRIO-213ENST00000509354 CCDC9Q9Y3X0 531 aaKnown RBP10.19□□□□□ -0.78
TRIO-213ENST00000509354 NFAT5O94916 1531 aa10.18□□□□□ -0.78
TRIO-213ENST00000509354 USP47Q96K76 1375 aa10.18□□□□□ -0.78
TRIO-213ENST00000509354 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
TRIO-213ENST00000509354 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
TRIO-213ENST00000509354 KIF20BQ96Q89 1820 aa10.17□□□□□ -0.78
TRIO-213ENST00000509354 DIEXFQ68CQ4 756 aaKnown RBP10.17□□□□□ -0.78
TRIO-213ENST00000509354 TESK2Q96S53 571 aa10.17□□□□□ -0.78
TRIO-213ENST00000509354 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
TRIO-213ENST00000509354 TNS1Q9HBL0 1735 aaKnown RBP10.16□□□□□ -0.78
TRIO-213ENST00000509354 TTC21BQ7Z4L5 1316 aa10.16□□□□□ -0.78
TRIO-213ENST00000509354 ST20-MTHFSA0A0A6YYL1 179 aa10.16□□□□□ -0.78
TRIO-213ENST00000509354 SRCAPQ6ZRS2 3230 aa10.16□□□□□ -0.78
TRIO-213ENST00000509354 CPDO75976 1380 aa10.15□□□□□ -0.78
TRIO-213ENST00000509354 ZBTB7CA1YPR0 619 aa10.15□□□□□ -0.78
TRIO-213ENST00000509354 FAM98CQ17RN3 349 aaKnown RBP10.15□□□□□ -0.78
TRIO-213ENST00000509354 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
TRIO-213ENST00000509354 RGPD1P0DJD0 1748 aa10.15□□□□□ -0.78
TRIO-213ENST00000509354 PARP4Q9UKK3 1724 aaKnown RBP10.15□□□□□ -0.78
TRIO-213ENST00000509354 COL5A2P05997 1499 aaPredicted RBP10.15□□□□□ -0.78
TRIO-213ENST00000509354 LRRC37A3O60309 1634 aa10.15□□□□□ -0.79
TRIO-213ENST00000509354 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 SPATA31A5Q5VU36 1347 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 SPATA31A7Q8IWB4 1347 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 A0A0G2JS52 829 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 SOX12O15370 315 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 GCP02774 474 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 NLRP6P59044 892 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 MYT1Q01538 1121 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 NLRP13Q86W25 1043 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 SEPT12Q8IYM1 358 aa10.14□□□□□ -0.79
TRIO-213ENST00000509354 TMC1Q8TDI8 760 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms