RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 C4orf48Q5BLP8 95 aa8.74□□□□□ -1.01
SNX2-208ENST00000509281 SEMA6BQ9H3T3 888 aa8.74□□□□□ -1.01
SNX2-208ENST00000509281 LRRC4BQ9NT99 713 aa8.72□□□□□ -1.01
SNX2-208ENST00000509281 SCO2A0A1W2PP80 73 aa8.7□□□□□ -1.02
SNX2-208ENST00000509281 FSHRP23945 695 aa8.7□□□□□ -1.02
SNX2-208ENST00000509281 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
SNX2-208ENST00000509281 C1QTNF9BB2RNN3 333 aa8.69□□□□□ -1.02
SNX2-208ENST00000509281 Q6ZVU0 165 aa8.69□□□□□ -1.02
SNX2-208ENST00000509281 PCDHGC3Q9UN70 934 aa8.69□□□□□ -1.02
SNX2-208ENST00000509281 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
SNX2-208ENST00000509281 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
SNX2-208ENST00000509281 CD163Q86VB7 1156 aa8.68□□□□□ -1.02
SNX2-208ENST00000509281 EMILIN1Q9Y6C2 1016 aa8.68□□□□□ -1.02
SNX2-208ENST00000509281 ZFP64Q9NPA5 681 aa8.67□□□□□ -1.02
SNX2-208ENST00000509281 OIP5O43482 229 aa8.66□□□□□ -1.02
SNX2-208ENST00000509281 CBLBQ13191 982 aa8.66□□□□□ -1.02
SNX2-208ENST00000509281 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
SNX2-208ENST00000509281 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
SNX2-208ENST00000509281 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
SNX2-208ENST00000509281 CHRNA4P43681 627 aa8.64□□□□□ -1.03
SNX2-208ENST00000509281 C1QTNF2Q9BXJ5 285 aa8.64□□□□□ -1.03
SNX2-208ENST00000509281 MAP4K5Q9Y4K4 846 aa8.64□□□□□ -1.03
SNX2-208ENST00000509281 C6orf229H3BNL8 230 aa8.63□□□□□ -1.03
SNX2-208ENST00000509281 GPR25O00155 361 aa8.63□□□□□ -1.03
SNX2-208ENST00000509281 HAP1P54257 671 aaPredicted RBP8.63□□□□□ -1.03
SNX2-208ENST00000509281 DOC2BQ14184 412 aa8.63□□□□□ -1.03
SNX2-208ENST00000509281 CCDC116Q8IYX3 515 aa8.63□□□□□ -1.03
SNX2-208ENST00000509281 RBM26Q5T8P6 1007 aaKnown RBP8.62□□□□□ -1.03
SNX2-208ENST00000509281 SUV39H2Q9H5I1 410 aa8.62□□□□□ -1.03
SNX2-208ENST00000509281 ARID1BQ8NFD5 2236 aaPredicted RBP8.62□□□□□ -1.03
SNX2-208ENST00000509281 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
SNX2-208ENST00000509281 GRIN2CQ14957 1233 aa8.61□□□□□ -1.03
SNX2-208ENST00000509281 FDX1P10109 184 aa8.6□□□□□ -1.03
SNX2-208ENST00000509281 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
SNX2-208ENST00000509281 INSM2Q96T92 566 aaPredicted RBP8.6□□□□□ -1.03
SNX2-208ENST00000509281 SEMA3EO15041 775 aa8.59□□□□□ -1.03
SNX2-208ENST00000509281 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
SNX2-208ENST00000509281 HOXB4P17483 251 aaPredicted RBP8.58□□□□□ -1.04
SNX2-208ENST00000509281 PRR7Q8TB68 274 aa8.58□□□□□ -1.04
SNX2-208ENST00000509281 NBPF11Q86T75 865 aa8.57□□□□□ -1.04
SNX2-208ENST00000509281 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
SNX2-208ENST00000509281 COBLO75128 1261 aa8.56□□□□□ -1.04
SNX2-208ENST00000509281 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
SNX2-208ENST00000509281 CTHP32929 405 aa8.56□□□□□ -1.04
SNX2-208ENST00000509281 RSPO4Q2I0M5 234 aaPredicted RBP8.56□□□□□ -1.04
SNX2-208ENST00000509281 PPP1R26Q5T8A7 1209 aaPredicted RBP8.56□□□□□ -1.04
SNX2-208ENST00000509281 FOXD4L5Q5VV16 416 aaPredicted RBP8.56□□□□□ -1.04
SNX2-208ENST00000509281 LINC00114Q6XXX2 140 aa8.56□□□□□ -1.04
SNX2-208ENST00000509281 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
SNX2-208ENST00000509281 BPHLQ86WA6 291 aaPredicted RBP8.56□□□□□ -1.04
SNX2-208ENST00000509281 TRIM22Q8IYM9 498 aa8.56□□□□□ -1.04
SNX2-208ENST00000509281 AGBL1Q96MI9 1066 aa8.56□□□□□ -1.04
SNX2-208ENST00000509281 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
SNX2-208ENST00000509281 TRMT44Q8IYL2 757 aaKnown RBP8.55□□□□□ -1.04
SNX2-208ENST00000509281 MAP10Q9P2G4 905 aa8.55□□□□□ -1.04
SNX2-208ENST00000509281 AGERQ15109 404 aa8.54□□□□□ -1.04
SNX2-208ENST00000509281 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
SNX2-208ENST00000509281 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
SNX2-208ENST00000509281 RELBQ01201 579 aa8.52□□□□□ -1.05
SNX2-208ENST00000509281 DBN1Q16643 649 aa8.52□□□□□ -1.05
SNX2-208ENST00000509281 LYPD8Q6UX82 237 aa8.52□□□□□ -1.05
SNX2-208ENST00000509281 OXCT2Q9BYC2 517 aaPredicted RBP8.52□□□□□ -1.05
SNX2-208ENST00000509281 PGPEP1Q9NXJ5 209 aa8.52□□□□□ -1.05
SNX2-208ENST00000509281 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
SNX2-208ENST00000509281 NKAPLQ5M9Q1 402 aa8.51□□□□□ -1.05
SNX2-208ENST00000509281 MX2P20592 715 aa8.49□□□□□ -1.05
SNX2-208ENST00000509281 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
SNX2-208ENST00000509281 FOXR1Q6PIV2 292 aa8.48□□□□□ -1.05
SNX2-208ENST00000509281 GTPBP3Q969Y2 492 aaKnown RBP8.48□□□□□ -1.05
SNX2-208ENST00000509281 RRAGCQ9HB90 399 aa8.48□□□□□ -1.05
SNX2-208ENST00000509281 ZNF395Q9H8N7 513 aaPredicted RBP8.46□□□□□ -1.06
SNX2-208ENST00000509281 LYSMD3Q7Z3D4 306 aa8.45□□□□□ -1.06
SNX2-208ENST00000509281 P3H3Q8IVL6 736 aa8.45□□□□□ -1.06
SNX2-208ENST00000509281 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
SNX2-208ENST00000509281 GNB5O14775 395 aa8.44□□□□□ -1.06
SNX2-208ENST00000509281 DYRK3O43781 588 aa8.44□□□□□ -1.06
SNX2-208ENST00000509281 YBX3P16989 372 aaKnown RBP eCLIP8.44□□□□□ -1.062e-8■□□□□ 8.6
SNX2-208ENST00000509281 MTMR2Q13614 643 aa8.44□□□□□ -1.06
SNX2-208ENST00000509281 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
SNX2-208ENST00000509281 MCTP1Q6DN14 999 aa8.44□□□□□ -1.06
SNX2-208ENST00000509281 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
SNX2-208ENST00000509281 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
SNX2-208ENST00000509281 NSFL1CQ9UNZ2 370 aaKnown RBP8.44□□□□□ -1.06
SNX2-208ENST00000509281 NDUFV2P19404 249 aa8.43□□□□□ -1.06
SNX2-208ENST00000509281 GATA4P43694 442 aa8.43□□□□□ -1.06
SNX2-208ENST00000509281 MAP2K3P46734 347 aa8.43□□□□□ -1.06
SNX2-208ENST00000509281 LRP8Q14114 963 aa8.43□□□□□ -1.06
SNX2-208ENST00000509281 TESPA1A2RU30 521 aaPredicted RBP8.42□□□□□ -1.06
SNX2-208ENST00000509281 SPDYE5A6NIY4 337 aa8.42□□□□□ -1.06
SNX2-208ENST00000509281 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
SNX2-208ENST00000509281 TRERF1Q96PN7 1200 aa8.42□□□□□ -1.06
SNX2-208ENST00000509281 RHOQP17081 205 aa8.41□□□□□ -1.06
SNX2-208ENST00000509281 KDF1Q8NAX2 398 aaPredicted RBP8.4□□□□□ -1.06
SNX2-208ENST00000509281 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
SNX2-208ENST00000509281 RIPOR1Q6ZS17 1223 aa8.39□□□□□ -1.07
SNX2-208ENST00000509281 KLRG1Q96E93 195 aa8.39□□□□□ -1.07
SNX2-208ENST00000509281 KRTAP4-11Q9BYQ6 195 aa8.39□□□□□ -1.07
SNX2-208ENST00000509281 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
SNX2-208ENST00000509281 CFAP99D6REC4 459 aa8.38□□□□□ -1.07
SNX2-208ENST00000509281 DGKGP49619 791 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms