RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 OVOS2Q6IE36 1432 aa15.54■□□□□ 0.08
RNF4-212ENST00000509258 TTC21BQ7Z4L5 1316 aa15.54■□□□□ 0.08
RNF4-212ENST00000509258 LTN1O94822 1766 aa15.54■□□□□ 0.08
RNF4-212ENST00000509258 NUP188Q5SRE5 1749 aa15.54■□□□□ 0.08
RNF4-212ENST00000509258 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
RNF4-212ENST00000509258 LRRC37A3O60309 1634 aa15.52■□□□□ 0.08
RNF4-212ENST00000509258 NBPF14Q5TI25 921 aa15.51■□□□□ 0.07
RNF4-212ENST00000509258 TESK2Q96S53 571 aa15.51■□□□□ 0.07
RNF4-212ENST00000509258 SBF2Q86WG5 1849 aa15.5■□□□□ 0.07
RNF4-212ENST00000509258 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
RNF4-212ENST00000509258 PEAK1Q9H792 1746 aa15.5■□□□□ 0.07
RNF4-212ENST00000509258 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
RNF4-212ENST00000509258 WDR17Q8IZU2 1322 aa15.49■□□□□ 0.07
RNF4-212ENST00000509258 KCNH5Q8NCM2 988 aa15.49■□□□□ 0.07
RNF4-212ENST00000509258 SLC12A5Q9H2X9 1139 aa15.49■□□□□ 0.07
RNF4-212ENST00000509258 AXIN2Q9Y2T1 843 aa15.49■□□□□ 0.07
RNF4-212ENST00000509258 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
RNF4-212ENST00000509258 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
RNF4-212ENST00000509258 SOX12O15370 315 aa15.48■□□□□ 0.07
RNF4-212ENST00000509258 DDB1Q16531 1140 aa15.48■□□□□ 0.07
RNF4-212ENST00000509258 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
RNF4-212ENST00000509258 TTC21AQ8NDW8 1320 aa15.47■□□□□ 0.07
RNF4-212ENST00000509258 ST20-MTHFSA0A0A6YYL1 179 aa15.47■□□□□ 0.07
RNF4-212ENST00000509258 NME9Q86XW9 330 aa15.47■□□□□ 0.07
RNF4-212ENST00000509258 CDCA7Q9BWT1 371 aaPredicted RBP15.47■□□□□ 0.07
RNF4-212ENST00000509258 A0A1W2PP64 1363 aa15.47■□□□□ 0.07
RNF4-212ENST00000509258 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
RNF4-212ENST00000509258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
RNF4-212ENST00000509258 ABCC6O95255 1503 aa15.46■□□□□ 0.07
RNF4-212ENST00000509258 BCL9O00512 1426 aa15.45■□□□□ 0.06
RNF4-212ENST00000509258 MYOM1P52179 1685 aa15.44■□□□□ 0.06
RNF4-212ENST00000509258 PLSCR1O15162 318 aa15.44■□□□□ 0.06
RNF4-212ENST00000509258 TMC1Q8TDI8 760 aa15.44■□□□□ 0.06
RNF4-212ENST00000509258 USP31Q70CQ4 1352 aa15.44■□□□□ 0.06
RNF4-212ENST00000509258 RGPD2P0DJD1 1756 aa15.44■□□□□ 0.06
RNF4-212ENST00000509258 CSB-PGBD3P0DP91 1061 aa15.43■□□□□ 0.06
RNF4-212ENST00000509258 CARD10Q9BWT7 1032 aa15.43■□□□□ 0.06
RNF4-212ENST00000509258 BCL11BQ9C0K0 894 aaPredicted RBP15.43■□□□□ 0.06
RNF4-212ENST00000509258 SPON1Q9HCB6 807 aa15.43■□□□□ 0.06
RNF4-212ENST00000509258 USP47Q96K76 1375 aa15.42■□□□□ 0.06
RNF4-212ENST00000509258 CCDC7Q96M83 1385 aa15.42■□□□□ 0.06
RNF4-212ENST00000509258 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
RNF4-212ENST00000509258 MARCH10Q8NA82 808 aaPredicted RBP15.41■□□□□ 0.06
RNF4-212ENST00000509258 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
RNF4-212ENST00000509258 PPP1R1BQ9UD71 204 aaPredicted RBP15.41■□□□□ 0.06
RNF4-212ENST00000509258 TNS2Q63HR2 1409 aa15.41■□□□□ 0.06
RNF4-212ENST00000509258 NINLQ9Y2I6 1382 aa15.4■□□□□ 0.06
RNF4-212ENST00000509258 KCNQ2O43526 872 aa15.4■□□□□ 0.06
RNF4-212ENST00000509258 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
RNF4-212ENST00000509258 PTF1AQ7RTS3 328 aa15.38■□□□□ 0.05
RNF4-212ENST00000509258 PUS7Q96PZ0 661 aaKnown RBP15.38■□□□□ 0.05
RNF4-212ENST00000509258 ANO8Q9HCE9 1232 aaPredicted RBP15.38■□□□□ 0.05
RNF4-212ENST00000509258 EXOC5O00471 708 aa15.37■□□□□ 0.05
RNF4-212ENST00000509258 FBLN1P23142 703 aa15.37■□□□□ 0.05
RNF4-212ENST00000509258 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
RNF4-212ENST00000509258 ERBB3P21860 1342 aa15.37■□□□□ 0.05
RNF4-212ENST00000509258 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
RNF4-212ENST00000509258 KAT6BQ8WYB5 2073 aa15.36■□□□□ 0.05
RNF4-212ENST00000509258 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
RNF4-212ENST00000509258 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
RNF4-212ENST00000509258 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
RNF4-212ENST00000509258 PROM2Q8N271 834 aa15.34■□□□□ 0.05
RNF4-212ENST00000509258 NHSQ6T4R5 1651 aa15.34■□□□□ 0.05
RNF4-212ENST00000509258 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
RNF4-212ENST00000509258 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
RNF4-212ENST00000509258 SLC24A1O60721 1099 aa15.33■□□□□ 0.04
RNF4-212ENST00000509258 TXNRD1Q16881 649 aa15.33■□□□□ 0.04
RNF4-212ENST00000509258 NLRP2Q9NX02 1062 aa15.33■□□□□ 0.04
RNF4-212ENST00000509258 STK32BQ9NY57 414 aa15.33■□□□□ 0.04
RNF4-212ENST00000509258 IL2RBP14784 551 aa15.32■□□□□ 0.04
RNF4-212ENST00000509258 YY1P25490 414 aa15.32■□□□□ 0.04
RNF4-212ENST00000509258 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
RNF4-212ENST00000509258 TMF1P82094 1093 aa15.3■□□□□ 0.04
RNF4-212ENST00000509258 SLC15A2Q16348 729 aa15.3■□□□□ 0.04
RNF4-212ENST00000509258 ANKRD24Q8TF21 1146 aa15.3■□□□□ 0.04
RNF4-212ENST00000509258 PDGFDQ9GZP0 370 aaPredicted RBP15.3■□□□□ 0.04
RNF4-212ENST00000509258 CLSPNQ9HAW4 1339 aa15.3■□□□□ 0.04
RNF4-212ENST00000509258 BTAF1O14981 1849 aa15.29■□□□□ 0.04
RNF4-212ENST00000509258 MAP3K19Q56UN5 1328 aa15.29■□□□□ 0.04
RNF4-212ENST00000509258 CARD14Q9BXL6 1004 aa15.29■□□□□ 0.04
RNF4-212ENST00000509258 FYB1O15117 783 aa15.28■□□□□ 0.04
RNF4-212ENST00000509258 PTGER2P43116 358 aa15.28■□□□□ 0.04
RNF4-212ENST00000509258 ACSBG1Q96GR2 724 aa15.28■□□□□ 0.04
RNF4-212ENST00000509258 GGNBP2Q9H3C7 697 aa15.28■□□□□ 0.04
RNF4-212ENST00000509258 MAP2P11137 1827 aaKnown RBP15.27■□□□□ 0.04
RNF4-212ENST00000509258 IP6K1Q92551 441 aa15.27■□□□□ 0.04
RNF4-212ENST00000509258 MTFR1LQ9H019 292 aa15.27■□□□□ 0.04
RNF4-212ENST00000509258 PAPPAQ13219 1627 aa15.27■□□□□ 0.03
RNF4-212ENST00000509258 ANKRD26Q9UPS8 1709 aa15.26■□□□□ 0.03
RNF4-212ENST00000509258 LTV1Q96GA3 475 aaPredicted RBP15.26■□□□□ 0.03
RNF4-212ENST00000509258 TIMELESSQ9UNS1 1208 aa15.26■□□□□ 0.03
RNF4-212ENST00000509258 HOXC9P31274 260 aa15.25■□□□□ 0.03
RNF4-212ENST00000509258 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
RNF4-212ENST00000509258 COG3Q96JB2 828 aa15.25■□□□□ 0.03
RNF4-212ENST00000509258 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
RNF4-212ENST00000509258 NSD3Q9BZ95 1437 aa15.25■□□□□ 0.03
RNF4-212ENST00000509258 DOT1LQ8TEK3 1739 aa15.24■□□□□ 0.03
RNF4-212ENST00000509258 MEGF6O75095 1541 aa15.23■□□□□ 0.03
RNF4-212ENST00000509258 UTRNP46939 3433 aa15.23■□□□□ 0.03
RNF4-212ENST00000509258 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms