RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 CPS1P31327 1500 aa11.5□□□□□ -0.57
CCSER1-208ENST00000509109 IQGAP1P46940 1657 aa11.5□□□□□ -0.57
CCSER1-208ENST00000509109 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
CCSER1-208ENST00000509109 ARHGAP31Q2M1Z3 1444 aa11.5□□□□□ -0.57
CCSER1-208ENST00000509109 GNPATO15228 680 aa11.49□□□□□ -0.57
CCSER1-208ENST00000509109 ZNF335Q9H4Z2 1342 aaPredicted RBP11.49□□□□□ -0.57
CCSER1-208ENST00000509109 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
CCSER1-208ENST00000509109 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
CCSER1-208ENST00000509109 DNAJB2P25686 324 aa11.48□□□□□ -0.57
CCSER1-208ENST00000509109 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
CCSER1-208ENST00000509109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCSER1-208ENST00000509109 MED14O60244 1454 aa11.48□□□□□ -0.57
CCSER1-208ENST00000509109 ADGRL2O95490 1459 aa11.48□□□□□ -0.57
CCSER1-208ENST00000509109 KDM5AP29375 1690 aaKnown RBP11.48□□□□□ -0.57
CCSER1-208ENST00000509109 CFAP65Q6ZU64 1925 aaKnown RBP11.47□□□□□ -0.57
CCSER1-208ENST00000509109 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
CCSER1-208ENST00000509109 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
CCSER1-208ENST00000509109 RRP7BPQ9NSQ0 103 aa11.47□□□□□ -0.57
CCSER1-208ENST00000509109 SYNMO15061 1565 aa11.46□□□□□ -0.57
CCSER1-208ENST00000509109 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.57
CCSER1-208ENST00000509109 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
CCSER1-208ENST00000509109 EFCAB6Q5THR3 1501 aa11.45□□□□□ -0.58
CCSER1-208ENST00000509109 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
CCSER1-208ENST00000509109 APLP1P51693 650 aa11.45□□□□□ -0.58
CCSER1-208ENST00000509109 VWDEQ8N2E2 1590 aa11.45□□□□□ -0.58
CCSER1-208ENST00000509109 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
CCSER1-208ENST00000509109 PXYLP1Q8TE99 480 aa11.44□□□□□ -0.58
CCSER1-208ENST00000509109 TMEM134Q9H6X4 195 aa11.44□□□□□ -0.58
CCSER1-208ENST00000509109 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
CCSER1-208ENST00000509109 PIK3C2BO00750 1634 aa11.43□□□□□ -0.58
CCSER1-208ENST00000509109 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
CCSER1-208ENST00000509109 OATP04181 439 aa11.43□□□□□ -0.58
CCSER1-208ENST00000509109 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
CCSER1-208ENST00000509109 KCNC4Q03721 635 aa11.43□□□□□ -0.58
CCSER1-208ENST00000509109 SLIT1O75093 1534 aa11.43□□□□□ -0.58
CCSER1-208ENST00000509109 FAM50AQ14320 339 aaKnown RBP11.42□□□□□ -0.58
CCSER1-208ENST00000509109 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
CCSER1-208ENST00000509109 RPRD2Q5VT52 1461 aaKnown RBP11.42□□□□□ -0.58
CCSER1-208ENST00000509109 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
CCSER1-208ENST00000509109 TET3O43151 1660 aa11.41□□□□□ -0.58
CCSER1-208ENST00000509109 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
CCSER1-208ENST00000509109 A0A0G2JS52 829 aa11.41□□□□□ -0.58
CCSER1-208ENST00000509109 NLRP7Q8WX94 980 aa11.41□□□□□ -0.58
CCSER1-208ENST00000509109 MTRQ99707 1265 aa11.41□□□□□ -0.58
CCSER1-208ENST00000509109 CHIC2Q9UKJ5 165 aa11.41□□□□□ -0.58
CCSER1-208ENST00000509109 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
CCSER1-208ENST00000509109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
CCSER1-208ENST00000509109 UNC13BO14795 1591 aa11.4□□□□□ -0.58
CCSER1-208ENST00000509109 ADGRB3O60242 1522 aa11.4□□□□□ -0.59
CCSER1-208ENST00000509109 TJAP1Q5JTD0 557 aa11.39□□□□□ -0.59
CCSER1-208ENST00000509109 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
CCSER1-208ENST00000509109 TOM1O60784 492 aa11.38□□□□□ -0.59
CCSER1-208ENST00000509109 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
CCSER1-208ENST00000509109 ROCK1Q13464 1354 aa11.38□□□□□ -0.59
CCSER1-208ENST00000509109 DISP3Q9P2K9 1392 aa11.38□□□□□ -0.59
CCSER1-208ENST00000509109 COPS2P61201 443 aa11.37□□□□□ -0.59
CCSER1-208ENST00000509109 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
CCSER1-208ENST00000509109 TMEM2Q9UHN6 1383 aa11.37□□□□□ -0.59
CCSER1-208ENST00000509109 STRCP1A6NGW2 1772 aa11.36□□□□□ -0.59
CCSER1-208ENST00000509109 NOS1P29475 1434 aa11.36□□□□□ -0.59
CCSER1-208ENST00000509109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.36□□□□□ -0.59
CCSER1-208ENST00000509109 IQGAP3Q86VI3 1631 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 SLC10A3P09131 477 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 TXNDC2Q86VQ3 553 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 IL21Q9HBE4 155 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
CCSER1-208ENST00000509109 CFHP08603 1231 aa11.33□□□□□ -0.6
CCSER1-208ENST00000509109 LMOD2Q6P5Q4 547 aa11.33□□□□□ -0.6
CCSER1-208ENST00000509109 E9PCH4 1651 aa11.33□□□□□ -0.6
CCSER1-208ENST00000509109 PIP4K2BP78356 416 aa11.32□□□□□ -0.6
CCSER1-208ENST00000509109 IDI1Q13907 227 aa11.32□□□□□ -0.6
CCSER1-208ENST00000509109 PCDHB3Q9Y5E6 796 aa11.32□□□□□ -0.6
CCSER1-208ENST00000509109 MYO5BQ9ULV0 1848 aa11.32□□□□□ -0.6
CCSER1-208ENST00000509109 LTKP29376 864 aa11.31□□□□□ -0.6
CCSER1-208ENST00000509109 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
CCSER1-208ENST00000509109 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
CCSER1-208ENST00000509109 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 MAP2K5Q13163 448 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 KMT5BQ4FZB7 885 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 ALKQ9UM73 1620 aa11.3□□□□□ -0.6
CCSER1-208ENST00000509109 XIRP1Q702N8 1843 aaKnown RBP11.3□□□□□ -0.6
CCSER1-208ENST00000509109 DDX11L8A8MPP1 907 aa11.29□□□□□ -0.6
CCSER1-208ENST00000509109 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
CCSER1-208ENST00000509109 RDH13Q8NBN7 331 aa11.28□□□□□ -0.6
CCSER1-208ENST00000509109 SPHKAPQ2M3C7 1700 aa11.28□□□□□ -0.6
CCSER1-208ENST00000509109 DIP2AQ14689 1571 aa11.28□□□□□ -0.6
CCSER1-208ENST00000509109 MED1Q15648 1581 aaPredicted RBP11.28□□□□□ -0.6
CCSER1-208ENST00000509109 ZFYVE9O95405 1425 aa11.27□□□□□ -0.6
CCSER1-208ENST00000509109 IRF6O14896 467 aa11.27□□□□□ -0.61
CCSER1-208ENST00000509109 ACTN4O43707 911 aaKnown RBP11.27□□□□□ -0.61
CCSER1-208ENST00000509109 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.61
CCSER1-208ENST00000509109 HSPA1LP34931 641 aa11.27□□□□□ -0.61
CCSER1-208ENST00000509109 NUP155O75694 1391 aa11.27□□□□□ -0.61
CCSER1-208ENST00000509109 PLEKHG1Q9ULL1 1385 aa11.27□□□□□ -0.61
CCSER1-208ENST00000509109 RIMS2Q9UQ26 1411 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms