RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 COL5A2P05997 1499 aaPredicted RBP14.2□□□□□ -0.14
UBE2D3-227ENST00000508818 APBA3O96018 575 aa14.2□□□□□ -0.14
UBE2D3-227ENST00000508818 ARHGEF25Q86VW2 580 aa14.2□□□□□ -0.14
UBE2D3-227ENST00000508818 SLC12A5Q9H2X9 1139 aa14.2□□□□□ -0.14
UBE2D3-227ENST00000508818 CRB1P82279 1406 aa14.2□□□□□ -0.14
UBE2D3-227ENST00000508818 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
UBE2D3-227ENST00000508818 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
UBE2D3-227ENST00000508818 AXIN2Q9Y2T1 843 aa14.19□□□□□ -0.14
UBE2D3-227ENST00000508818 SLIT3O75094 1523 aa14.19□□□□□ -0.14
UBE2D3-227ENST00000508818 LMO7Q8WWI1 1683 aa14.18□□□□□ -0.14
UBE2D3-227ENST00000508818 ST20-MTHFSA0A0A6YYL1 179 aa14.18□□□□□ -0.14
UBE2D3-227ENST00000508818 PSDA5PKW4 1024 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-227ENST00000508818 DDB1Q16531 1140 aa14.18□□□□□ -0.14
UBE2D3-227ENST00000508818 PUS7Q96PZ0 661 aaKnown RBP14.18□□□□□ -0.14
UBE2D3-227ENST00000508818 RGPD1P0DJD0 1748 aa14.18□□□□□ -0.14
UBE2D3-227ENST00000508818 WDR17Q8IZU2 1322 aa14.17□□□□□ -0.14
UBE2D3-227ENST00000508818 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
UBE2D3-227ENST00000508818 NME9Q86XW9 330 aa14.17□□□□□ -0.14
UBE2D3-227ENST00000508818 CDCA7Q9BWT1 371 aaPredicted RBP14.17□□□□□ -0.14
UBE2D3-227ENST00000508818 AKAP12Q02952 1782 aa14.17□□□□□ -0.14
UBE2D3-227ENST00000508818 EZH2Q15910 746 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-227ENST00000508818 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
UBE2D3-227ENST00000508818 CARD10Q9BWT7 1032 aa14.15□□□□□ -0.14
UBE2D3-227ENST00000508818 USP31Q70CQ4 1352 aa14.14□□□□□ -0.15
UBE2D3-227ENST00000508818 R3HDM1Q15032 1099 aaKnown RBP14.14□□□□□ -0.15
UBE2D3-227ENST00000508818 NBPF14Q5TI25 921 aa14.14□□□□□ -0.15
UBE2D3-227ENST00000508818 CAMKK2Q96RR4 588 aa14.14□□□□□ -0.15
UBE2D3-227ENST00000508818 EXOC5O00471 708 aa14.13□□□□□ -0.15
UBE2D3-227ENST00000508818 TMF1P82094 1093 aa14.13□□□□□ -0.15
UBE2D3-227ENST00000508818 TESK2Q96S53 571 aa14.13□□□□□ -0.15
UBE2D3-227ENST00000508818 NLRP2Q9NX02 1062 aa14.13□□□□□ -0.15
UBE2D3-227ENST00000508818 DISP2A7MBM2 1401 aa14.13□□□□□ -0.15
UBE2D3-227ENST00000508818 EDC4Q6P2E9 1401 aaKnown RBP14.13□□□□□ -0.15
UBE2D3-227ENST00000508818 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
UBE2D3-227ENST00000508818 NINLQ9Y2I6 1382 aa14.12□□□□□ -0.15
UBE2D3-227ENST00000508818 A0A1W2PP64 1363 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 OVOS2A0A0G2JMS6 1433 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 OVOS2A0A0J9YW53 1432 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 CDCA8Q53HL2 280 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 OVOS2Q6IE36 1432 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 MON2Q7Z3U7 1717 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 COG3Q96JB2 828 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 COL18A1P39060 1754 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 CD163L1Q9NR16 1453 aa14.11□□□□□ -0.15
UBE2D3-227ENST00000508818 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
UBE2D3-227ENST00000508818 PARP4Q9UKK3 1724 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-227ENST00000508818 USP47Q96K76 1375 aa14.09□□□□□ -0.15
UBE2D3-227ENST00000508818 MARCH10Q8NA82 808 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-227ENST00000508818 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
UBE2D3-227ENST00000508818 TNS1Q9HBL0 1735 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-227ENST00000508818 NFAT5O94916 1531 aa14.09□□□□□ -0.15
UBE2D3-227ENST00000508818 LTV1Q96GA3 475 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-227ENST00000508818 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-227ENST00000508818 RGPD5Q99666 1765 aa14.07□□□□□ -0.16
UBE2D3-227ENST00000508818 AMPHP49418 695 aa14.07□□□□□ -0.16
UBE2D3-227ENST00000508818 ERBB3P21860 1342 aa14.07□□□□□ -0.16
UBE2D3-227ENST00000508818 ABCC6O95255 1503 aa14.06□□□□□ -0.16
UBE2D3-227ENST00000508818 IL2RBP14784 551 aa14.06□□□□□ -0.16
UBE2D3-227ENST00000508818 IP6K1Q92551 441 aa14.06□□□□□ -0.16
UBE2D3-227ENST00000508818 CLSPNQ9HAW4 1339 aa14.06□□□□□ -0.16
UBE2D3-227ENST00000508818 PLSCR1O15162 318 aa14.05□□□□□ -0.16
UBE2D3-227ENST00000508818 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-227ENST00000508818 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
UBE2D3-227ENST00000508818 LRRC37A3O60309 1634 aa14.04□□□□□ -0.16
UBE2D3-227ENST00000508818 SRCAPQ6ZRS2 3230 aa14.02□□□□□ -0.16
UBE2D3-227ENST00000508818 LTN1O94822 1766 aa14.02□□□□□ -0.16
UBE2D3-227ENST00000508818 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
UBE2D3-227ENST00000508818 PTF1AQ7RTS3 328 aa14.02□□□□□ -0.17
UBE2D3-227ENST00000508818 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-227ENST00000508818 GGNBP2Q9H3C7 697 aa14.02□□□□□ -0.17
UBE2D3-227ENST00000508818 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 BCL9O00512 1426 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 FYB1O15117 783 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 FBLN1P23142 703 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 ACSBG1Q96GR2 724 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 POLR3GLQ9BT43 218 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 LRP5O75197 1615 aa14.01□□□□□ -0.17
UBE2D3-227ENST00000508818 HOXC9P31274 260 aa14□□□□□ -0.17
UBE2D3-227ENST00000508818 DDX54Q8TDD1 881 aaKnown RBP14□□□□□ -0.17
UBE2D3-227ENST00000508818 TNS2Q63HR2 1409 aa13.99□□□□□ -0.17
UBE2D3-227ENST00000508818 WNK3Q9BYP7 1800 aa13.99□□□□□ -0.17
UBE2D3-227ENST00000508818 KCNQ2O43526 872 aa13.99□□□□□ -0.17
UBE2D3-227ENST00000508818 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
UBE2D3-227ENST00000508818 PPP1R1BQ9UD71 204 aaPredicted RBP13.99□□□□□ -0.17
UBE2D3-227ENST00000508818 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
UBE2D3-227ENST00000508818 SPON1Q9HCB6 807 aa13.98□□□□□ -0.17
UBE2D3-227ENST00000508818 STK32BQ9NY57 414 aa13.98□□□□□ -0.17
UBE2D3-227ENST00000508818 SBF2Q86WG5 1849 aa13.98□□□□□ -0.17
UBE2D3-227ENST00000508818 RREB1Q92766 1687 aa13.98□□□□□ -0.17
UBE2D3-227ENST00000508818 NUP188Q5SRE5 1749 aa13.97□□□□□ -0.17
UBE2D3-227ENST00000508818 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
UBE2D3-227ENST00000508818 PROM2Q8N271 834 aa13.96□□□□□ -0.17
UBE2D3-227ENST00000508818 SMG6Q86US8 1419 aaKnown RBP13.96□□□□□ -0.18
UBE2D3-227ENST00000508818 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
UBE2D3-227ENST00000508818 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBE2D3-227ENST00000508818 ZCRB1Q8TBF4 217 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-227ENST00000508818 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
UBE2D3-227ENST00000508818 SYTL4Q96C24 671 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms