RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
HMGB1P44-201ENST00000508597 PRKD2Q9BZL6 878 aa8.51□□□□□ -1.05
HMGB1P44-201ENST00000508597 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
HMGB1P44-201ENST00000508597 TIAM1Q13009 1591 aa8.51□□□□□ -1.05
HMGB1P44-201ENST00000508597 MTUS2Q5JR59 1369 aa8.5□□□□□ -1.05
HMGB1P44-201ENST00000508597 CFAP43Q8NDM7 1665 aa8.5□□□□□ -1.05
HMGB1P44-201ENST00000508597 ARID3CA6NKF2 412 aa8.5□□□□□ -1.05
HMGB1P44-201ENST00000508597 GGCXP38435 758 aa8.49□□□□□ -1.05
HMGB1P44-201ENST00000508597 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
HMGB1P44-201ENST00000508597 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
HMGB1P44-201ENST00000508597 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
HMGB1P44-201ENST00000508597 DIP2BQ9P265 1576 aa8.48□□□□□ -1.05
HMGB1P44-201ENST00000508597 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
HMGB1P44-201ENST00000508597 FAM69CQ0P6D2 419 aa8.48□□□□□ -1.05
HMGB1P44-201ENST00000508597 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
HMGB1P44-201ENST00000508597 TSC1Q92574 1164 aa8.48□□□□□ -1.05
HMGB1P44-201ENST00000508597 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
HMGB1P44-201ENST00000508597 KIF13AQ9H1H9 1805 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 KIF14Q15058 1648 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 ABCA9Q8IUA7 1624 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 LRRC9Q6ZRR7 1453 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 SLC19A1P41440 591 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 ERICH6Q7L0X2 663 aa8.47□□□□□ -1.05
HMGB1P44-201ENST00000508597 RFC5P40937 340 aa8.46□□□□□ -1.06
HMGB1P44-201ENST00000508597 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.06
HMGB1P44-201ENST00000508597 PHLDB1Q86UU1 1377 aa8.46□□□□□ -1.06
HMGB1P44-201ENST00000508597 SUPT6HQ7KZ85 1726 aaKnown RBP8.46□□□□□ -1.06
HMGB1P44-201ENST00000508597 MAGI3Q5TCQ9 1506 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 ARAP3Q8WWN8 1544 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 MAP3K4Q9Y6R4 1608 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 LRRN4Q8WUT4 740 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 MAP10Q9P2G4 905 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 CD109Q6YHK3 1445 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 TEX14Q8IWB6 1497 aa8.45□□□□□ -1.06
HMGB1P44-201ENST00000508597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
HMGB1P44-201ENST00000508597 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
HMGB1P44-201ENST00000508597 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
HMGB1P44-201ENST00000508597 AP1G2O75843 785 aa8.43□□□□□ -1.06
HMGB1P44-201ENST00000508597 PTPRNQ16849 979 aa8.43□□□□□ -1.06
HMGB1P44-201ENST00000508597 TIMELESSQ9UNS1 1208 aa8.43□□□□□ -1.06
HMGB1P44-201ENST00000508597 PLCH2O75038 1416 aa8.43□□□□□ -1.06
HMGB1P44-201ENST00000508597 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
HMGB1P44-201ENST00000508597 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 KANK4Q5T7N3 995 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 NCOA2Q15596 1464 aa8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
HMGB1P44-201ENST00000508597 ITSN2Q9NZM3 1697 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 TTC37Q6PGP7 1564 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 NEO1Q92859 1461 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 RGS20O76081 388 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 SKOR1P84550 965 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 KCNH2Q12809 1159 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 EFCAB2Q5VUJ9 269 aa8.41□□□□□ -1.06
HMGB1P44-201ENST00000508597 GPATCH8Q9UKJ3 1502 aaKnown RBP8.4□□□□□ -1.06
HMGB1P44-201ENST00000508597 MIA2Q96PC5 1412 aa8.4□□□□□ -1.06
HMGB1P44-201ENST00000508597 TSPOAP1O95153 1857 aa8.4□□□□□ -1.07
HMGB1P44-201ENST00000508597 CDC42BPAQ5VT25 1732 aa8.4□□□□□ -1.07
HMGB1P44-201ENST00000508597 PREX2Q70Z35 1606 aa8.4□□□□□ -1.07
HMGB1P44-201ENST00000508597 CTHP32929 405 aa8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 RPIAP49247 311 aa8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 TRIM32Q13049 653 aa8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 UNC93B1Q9H1C4 597 aa8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 CFDP1Q9UEE9 299 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 PPRC1Q5VV67 1664 aaKnown RBP8.39□□□□□ -1.07
HMGB1P44-201ENST00000508597 FANCAO15360 1455 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 PLEKHH2Q8IVE3 1493 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 MYOM3Q5VTT5 1437 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 CDC42BPBQ9Y5S2 1711 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 USP17L8P0C7I0 530 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 NR6A1Q15406 480 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 BAP1Q92560 729 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 ARHGAP5Q13017 1502 aa8.38□□□□□ -1.07
HMGB1P44-201ENST00000508597 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
HMGB1P44-201ENST00000508597 AKNAQ7Z591 1439 aa8.37□□□□□ -1.07
HMGB1P44-201ENST00000508597 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
HMGB1P44-201ENST00000508597 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P44-201ENST00000508597 GDF9O60383 454 aa8.36□□□□□ -1.07
HMGB1P44-201ENST00000508597 SH3BP2P78314 561 aa8.36□□□□□ -1.07
HMGB1P44-201ENST00000508597 FOXC1Q12948 553 aa8.36□□□□□ -1.07
HMGB1P44-201ENST00000508597 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
HMGB1P44-201ENST00000508597 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
HMGB1P44-201ENST00000508597 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
HMGB1P44-201ENST00000508597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGB1P44-201ENST00000508597 ADGRL1O94910 1474 aa8.34□□□□□ -1.07
HMGB1P44-201ENST00000508597 TMEM259Q4ZIN3 620 aa8.34□□□□□ -1.07
HMGB1P44-201ENST00000508597 FGD6Q6ZV73 1430 aa8.34□□□□□ -1.07
HMGB1P44-201ENST00000508597 DENND4BO75064 1496 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms