RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 RGPD5Q99666 1765 aa23.54■■□□□ 1.36
TRIM60-203ENST00000508504 FLT4P35916 1363 aa23.54■■□□□ 1.36
TRIM60-203ENST00000508504 IP6K1Q92551 441 aa23.54■■□□□ 1.36
TRIM60-203ENST00000508504 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
TRIM60-203ENST00000508504 COL3A1P02461 1466 aaPredicted RBP23.52■■□□□ 1.36
TRIM60-203ENST00000508504 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
TRIM60-203ENST00000508504 LMO7Q8WWI1 1683 aa23.51■■□□□ 1.35
TRIM60-203ENST00000508504 CAMTA1Q9Y6Y1 1673 aa23.51■■□□□ 1.35
TRIM60-203ENST00000508504 LTV1Q96GA3 475 aaPredicted RBP23.5■■□□□ 1.35
TRIM60-203ENST00000508504 RTL1A6NKG5 1358 aa23.5■■□□□ 1.35
TRIM60-203ENST00000508504 KIF24Q5T7B8 1368 aa23.49■■□□□ 1.35
TRIM60-203ENST00000508504 INSRP06213 1382 aa23.48■■□□□ 1.35
TRIM60-203ENST00000508504 EIF4A2Q14240 407 aaKnown RBP23.48■■□□□ 1.35
TRIM60-203ENST00000508504 ILDR1Q86SU0 546 aaPredicted RBP23.48■■□□□ 1.35
TRIM60-203ENST00000508504 CCER2I3L3R5 266 aa23.48■■□□□ 1.35
TRIM60-203ENST00000508504 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
TRIM60-203ENST00000508504 BTG4Q9NY30 223 aa23.47■■□□□ 1.35
TRIM60-203ENST00000508504 COL14A1Q05707 1796 aaKnown RBP23.46■■□□□ 1.35
TRIM60-203ENST00000508504 IL13P35225 146 aa23.46■■□□□ 1.35
TRIM60-203ENST00000508504 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
TRIM60-203ENST00000508504 BLMP54132 1417 aaPredicted RBP23.45■■□□□ 1.34
TRIM60-203ENST00000508504 PLCH1Q4KWH8 1693 aa23.45■■□□□ 1.34
TRIM60-203ENST00000508504 DIAPH1O60610 1272 aaKnown RBP23.44■■□□□ 1.34
TRIM60-203ENST00000508504 ANKRD24Q8TF21 1146 aa23.44■■□□□ 1.34
TRIM60-203ENST00000508504 ERBB3P21860 1342 aa23.44■■□□□ 1.34
TRIM60-203ENST00000508504 ABCC6O95255 1503 aa23.44■■□□□ 1.34
TRIM60-203ENST00000508504 COL5A2P05997 1499 aaPredicted RBP23.44■■□□□ 1.34
TRIM60-203ENST00000508504 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
TRIM60-203ENST00000508504 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
TRIM60-203ENST00000508504 PNISRQ8TF01 805 aaKnown RBP23.42■■□□□ 1.34
TRIM60-203ENST00000508504 NGLY1Q96IV0 654 aa23.42■■□□□ 1.34
TRIM60-203ENST00000508504 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
TRIM60-203ENST00000508504 SLIT2O94813 1529 aa23.41■■□□□ 1.34
TRIM60-203ENST00000508504 U2SURPO15042 1029 aaKnown RBP23.4■■□□□ 1.34
TRIM60-203ENST00000508504 NBPF6Q5VWK0 638 aa23.4■■□□□ 1.34
TRIM60-203ENST00000508504 NBPF4Q96M43 638 aa23.4■■□□□ 1.34
TRIM60-203ENST00000508504 LARP1Q6PKG0 1096 aaKnown RBP23.39■■□□□ 1.34
TRIM60-203ENST00000508504 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.34
TRIM60-203ENST00000508504 EYA1Q99502 592 aa23.39■■□□□ 1.34
TRIM60-203ENST00000508504 BCL9LQ86UU0 1499 aa23.38■■□□□ 1.33
TRIM60-203ENST00000508504 NRAPQ86VF7 1730 aa23.38■■□□□ 1.33
TRIM60-203ENST00000508504 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
TRIM60-203ENST00000508504 FNBP4Q8N3X1 1017 aaPredicted RBP23.38■■□□□ 1.33
TRIM60-203ENST00000508504 CSB-PGBD3P0DP91 1061 aa23.37■■□□□ 1.33
TRIM60-203ENST00000508504 EVA1CP58658 441 aa23.37■■□□□ 1.33
TRIM60-203ENST00000508504 AEBP1Q8IUX7 1158 aa23.37■■□□□ 1.33
TRIM60-203ENST00000508504 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
TRIM60-203ENST00000508504 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
TRIM60-203ENST00000508504 WDR17Q8IZU2 1322 aa23.37■■□□□ 1.33
TRIM60-203ENST00000508504 U2AF1L5P0DN76 240 aaPredicted RBP23.36■■□□□ 1.33
TRIM60-203ENST00000508504 U2AF1Q01081 240 aaKnown RBP eCLIP23.36■■□□□ 1.33
TRIM60-203ENST00000508504 NWD2Q9ULI1 1742 aa23.36■■□□□ 1.33
TRIM60-203ENST00000508504 HMOX1P09601 288 aa23.35■■□□□ 1.33
TRIM60-203ENST00000508504 NLRP2Q9NX02 1062 aa23.35■■□□□ 1.33
TRIM60-203ENST00000508504 AFF2P51816 1311 aa23.35■■□□□ 1.33
TRIM60-203ENST00000508504 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
TRIM60-203ENST00000508504 NUDCQ9Y266 331 aa23.34■■□□□ 1.33
TRIM60-203ENST00000508504 WDR43Q15061 677 aaKnown RBP eCLIP23.33■■□□□ 1.33
TRIM60-203ENST00000508504 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.33
TRIM60-203ENST00000508504 TOM1L2Q6ZVM7 507 aa23.33■■□□□ 1.33
TRIM60-203ENST00000508504 UNC5CLQ8IV45 518 aa23.33■■□□□ 1.33
TRIM60-203ENST00000508504 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
TRIM60-203ENST00000508504 USP21Q9UK80 565 aa23.33■■□□□ 1.33
TRIM60-203ENST00000508504 CRB1P82279 1406 aa23.3■■□□□ 1.32
TRIM60-203ENST00000508504 FAM208AQ9UK61 1670 aaKnown RBP23.3■■□□□ 1.32
TRIM60-203ENST00000508504 NCAPD2Q15021 1401 aa23.29■■□□□ 1.32
TRIM60-203ENST00000508504 KDRP35968 1356 aa23.29■■□□□ 1.32
TRIM60-203ENST00000508504 SENP3-EIF4A1A0A087X0R7 540 aa23.28■■□□□ 1.32
TRIM60-203ENST00000508504 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
TRIM60-203ENST00000508504 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
TRIM60-203ENST00000508504 CARD10Q9BWT7 1032 aa23.28■■□□□ 1.32
TRIM60-203ENST00000508504 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.26■■□□□ 1.31
TRIM60-203ENST00000508504 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
TRIM60-203ENST00000508504 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
TRIM60-203ENST00000508504 SPATA31A1Q5TZJ5 1347 aa23.25■■□□□ 1.31
TRIM60-203ENST00000508504 SPATA31A5Q5VU36 1347 aa23.25■■□□□ 1.31
TRIM60-203ENST00000508504 SPATA31A7Q8IWB4 1347 aa23.25■■□□□ 1.31
TRIM60-203ENST00000508504 VPS72Q15906 364 aa23.25■■□□□ 1.31
TRIM60-203ENST00000508504 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
TRIM60-203ENST00000508504 FCHSD2O94868 740 aa23.24■■□□□ 1.31
TRIM60-203ENST00000508504 PHACTR3Q96KR7 559 aa23.24■■□□□ 1.31
TRIM60-203ENST00000508504 MEGF6O75095 1541 aa23.24■■□□□ 1.31
TRIM60-203ENST00000508504 RGS17Q9UGC6 210 aaPredicted RBP23.23■■□□□ 1.31
TRIM60-203ENST00000508504 ATRNO75882 1429 aa23.22■■□□□ 1.31
TRIM60-203ENST00000508504 QTRT2Q9H974 415 aaKnown RBP23.21■■□□□ 1.31
TRIM60-203ENST00000508504 TCP11L2Q8N4U5 519 aa23.2■■□□□ 1.3
TRIM60-203ENST00000508504 GLI3P10071 1580 aa23.19■■□□□ 1.3
TRIM60-203ENST00000508504 TRPC5Q9UL62 973 aaPredicted RBP23.19■■□□□ 1.3
TRIM60-203ENST00000508504 GJD4Q96KN9 370 aaPredicted RBP23.19■■□□□ 1.3
TRIM60-203ENST00000508504 FAM98CQ17RN3 349 aaKnown RBP23.18■■□□□ 1.3
TRIM60-203ENST00000508504 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
TRIM60-203ENST00000508504 RUNDC1Q96C34 613 aa23.17■■□□□ 1.3
TRIM60-203ENST00000508504 DISP2A7MBM2 1401 aa23.17■■□□□ 1.3
TRIM60-203ENST00000508504 IL2RBP14784 551 aa23.16■■□□□ 1.3
TRIM60-203ENST00000508504 APAF1O14727 1248 aa23.16■■□□□ 1.3
TRIM60-203ENST00000508504 ZNF772Q68DY9 489 aaPredicted RBP23.16■■□□□ 1.3
TRIM60-203ENST00000508504 RRP7AQ9Y3A4 280 aaKnown RBP23.16■■□□□ 1.3
TRIM60-203ENST00000508504 WNK3Q9BYP7 1800 aa23.15■■□□□ 1.3
TRIM60-203ENST00000508504 MTHFSDQ2M296 383 aaKnown RBP23.15■■□□□ 1.3
TRIM60-203ENST00000508504 EP400Q96L91 3159 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms