RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 ARHGAP9Q9BRR9 750 aa9.81□□□□□ -0.84
USO1-202ENST00000508454 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
USO1-202ENST00000508454 C6orf118Q5T5N4 469 aa9.8□□□□□ -0.84
USO1-202ENST00000508454 NPAS3Q8IXF0 933 aa9.8□□□□□ -0.84
USO1-202ENST00000508454 CCDC116Q8IYX3 515 aa9.8□□□□□ -0.84
USO1-202ENST00000508454 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
USO1-202ENST00000508454 GMPRP36959 345 aa9.79□□□□□ -0.84
USO1-202ENST00000508454 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
USO1-202ENST00000508454 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
USO1-202ENST00000508454 PPP1R26Q5T8A7 1209 aaPredicted RBP9.78□□□□□ -0.84
USO1-202ENST00000508454 SOS2Q07890 1332 aaPredicted RBP9.78□□□□□ -0.84
USO1-202ENST00000508454 ADAM32Q8TC27 787 aa9.77□□□□□ -0.85
USO1-202ENST00000508454 KCTD15Q96SI1 283 aaPredicted RBP9.77□□□□□ -0.85
USO1-202ENST00000508454 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
USO1-202ENST00000508454 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
USO1-202ENST00000508454 CBLBQ13191 982 aa9.76□□□□□ -0.85
USO1-202ENST00000508454 INTS6LQ5JSJ4 861 aaKnown RBP9.76□□□□□ -0.85
USO1-202ENST00000508454 Q6ZVU0 165 aa9.76□□□□□ -0.85
USO1-202ENST00000508454 DNMT3LQ9UJW3 386 aa9.76□□□□□ -0.85
USO1-202ENST00000508454 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
USO1-202ENST00000508454 SLC16A10Q8TF71 515 aa9.75□□□□□ -0.85
USO1-202ENST00000508454 SLC10A4Q96EP9 437 aa9.75□□□□□ -0.85
USO1-202ENST00000508454 GPSM3Q9Y4H4 160 aa9.75□□□□□ -0.85
USO1-202ENST00000508454 BMP2P12643 396 aa9.74□□□□□ -0.85
USO1-202ENST00000508454 VSIG8P0DPA2 414 aa9.73□□□□□ -0.85
USO1-202ENST00000508454 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
USO1-202ENST00000508454 PTK2Q05397 1052 aa9.73□□□□□ -0.85
USO1-202ENST00000508454 ZBTB33Q86T24 672 aa9.73□□□□□ -0.85
USO1-202ENST00000508454 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
USO1-202ENST00000508454 IRF7Q92985 503 aa9.73□□□□□ -0.85
USO1-202ENST00000508454 GJD4Q96KN9 370 aaPredicted RBP9.73□□□□□ -0.85
USO1-202ENST00000508454 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
USO1-202ENST00000508454 TSEN34Q9BSV6 310 aaKnown RBP9.72□□□□□ -0.85
USO1-202ENST00000508454 STK17AQ9UEE5 414 aa9.72□□□□□ -0.85
USO1-202ENST00000508454 MAN1A2O60476 641 aa9.71□□□□□ -0.86
USO1-202ENST00000508454 CDV3Q9UKY7 258 aaKnown RBP9.71□□□□□ -0.86
USO1-202ENST00000508454 GPR37L1O60883 481 aa9.7□□□□□ -0.86
USO1-202ENST00000508454 PCMTD1Q96MG8 357 aaPredicted RBP9.7□□□□□ -0.86
USO1-202ENST00000508454 ESPNB1AK53 854 aa9.69□□□□□ -0.86
USO1-202ENST00000508454 SPINT1O43278 529 aa9.69□□□□□ -0.86
USO1-202ENST00000508454 PPFIA3O75145 1194 aa9.69□□□□□ -0.86
USO1-202ENST00000508454 UPP2O95045 317 aa9.69□□□□□ -0.86
USO1-202ENST00000508454 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
USO1-202ENST00000508454 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
USO1-202ENST00000508454 KDF1Q8NAX2 398 aaPredicted RBP9.68□□□□□ -0.86
USO1-202ENST00000508454 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
USO1-202ENST00000508454 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
USO1-202ENST00000508454 LILRA1O75019 489 aa9.67□□□□□ -0.86
USO1-202ENST00000508454 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
USO1-202ENST00000508454 ZNF784Q8NCA9 323 aaPredicted RBP9.67□□□□□ -0.86
USO1-202ENST00000508454 DHX9Q08211 1270 aaKnown RBP9.66□□□□□ -0.86
USO1-202ENST00000508454 ERVH48-1M5A8F1 160 aa9.65□□□□□ -0.86
USO1-202ENST00000508454 ADD1P35611 737 aaKnown RBP9.65□□□□□ -0.86
USO1-202ENST00000508454 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
USO1-202ENST00000508454 NBPF20Q3BBV1 942 aa9.65□□□□□ -0.86
USO1-202ENST00000508454 FBXO45P0C2W1 286 aa9.64□□□□□ -0.87
USO1-202ENST00000508454 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
USO1-202ENST00000508454 PTSQ03393 145 aa9.63□□□□□ -0.87
USO1-202ENST00000508454 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
USO1-202ENST00000508454 INSM2Q96T92 566 aaPredicted RBP9.63□□□□□ -0.87
USO1-202ENST00000508454 RAB15P59190 212 aa9.62□□□□□ -0.87
USO1-202ENST00000508454 RELBQ01201 579 aa9.62□□□□□ -0.87
USO1-202ENST00000508454 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.62□□□□□ -0.87
USO1-202ENST00000508454 GPR161Q8N6U8 529 aaKnown RBP9.62□□□□□ -0.87
USO1-202ENST00000508454 ZSCAN1Q8NBB4 408 aa9.62□□□□□ -0.87
USO1-202ENST00000508454 MTMR14Q8NCE2 650 aa9.62□□□□□ -0.87
USO1-202ENST00000508454 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
USO1-202ENST00000508454 ZBBXA8MT70 800 aa9.61□□□□□ -0.87
USO1-202ENST00000508454 KRT76Q01546 638 aa9.61□□□□□ -0.87
USO1-202ENST00000508454 ADH1AP07327 375 aa9.6□□□□□ -0.87
USO1-202ENST00000508454 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
USO1-202ENST00000508454 RNF217Q8TC41 542 aa9.6□□□□□ -0.87
USO1-202ENST00000508454 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
USO1-202ENST00000508454 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
USO1-202ENST00000508454 SENP3-EIF4A1A0A087X0R7 540 aa9.58□□□□□ -0.88
USO1-202ENST00000508454 SLC35F4A4IF30 521 aa9.58□□□□□ -0.88
USO1-202ENST00000508454 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
USO1-202ENST00000508454 SNRKQ9NRH2 765 aa9.58□□□□□ -0.88
USO1-202ENST00000508454 SOCS7O14512 581 aa9.57□□□□□ -0.88
USO1-202ENST00000508454 SEPT12Q8IYM1 358 aa9.57□□□□□ -0.88
USO1-202ENST00000508454 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
USO1-202ENST00000508454 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
USO1-202ENST00000508454 CYLDQ9NQC7 956 aa9.57□□□□□ -0.88
USO1-202ENST00000508454 PTGIRP43119 386 aa9.56□□□□□ -0.88
USO1-202ENST00000508454 PCDHB9Q9Y5E1 797 aa9.56□□□□□ -0.88
USO1-202ENST00000508454 NANOS1Q8WY41 292 aaKnown RBP9.55□□□□□ -0.88
USO1-202ENST00000508454 POLMQ9NP87 494 aaPredicted RBP9.54□□□□□ -0.88
USO1-202ENST00000508454 NR1H3Q13133 447 aa9.53□□□□□ -0.88
USO1-202ENST00000508454 ITGA6P23229 1130 aa9.52□□□□□ -0.89
USO1-202ENST00000508454 RNFT1Q5M7Z0 435 aa9.52□□□□□ -0.89
USO1-202ENST00000508454 SCTRP47872 440 aa9.51□□□□□ -0.89
USO1-202ENST00000508454 ERVK-9P63128 1117 aa9.51□□□□□ -0.89
USO1-202ENST00000508454 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
USO1-202ENST00000508454 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
USO1-202ENST00000508454 COL25A1Q9BXS0 654 aaPredicted RBP9.49□□□□□ -0.89
USO1-202ENST00000508454 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
USO1-202ENST00000508454 CNTNAP3BQ96NU0 1288 aa9.48□□□□□ -0.89
USO1-202ENST00000508454 CNTNAP3Q9BZ76 1288 aa9.48□□□□□ -0.89
USO1-202ENST00000508454 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
USO1-202ENST00000508454 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms