RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 C4orf48Q5BLP8 95 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 C6orf118Q5T5N4 469 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 TRIM46Q7Z4K8 759 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 ZBTB33Q86T24 672 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 PNMA1Q8ND90 353 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 PURBQ96QR8 312 aaKnown RBP3.42□□□□□ -1.86
SMN2-208ENST00000508258 PODXL2Q9NZ53 605 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 FKBPLQ9UIM3 349 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 SERPINA10Q9UK55 444 aa3.42□□□□□ -1.86
SMN2-208ENST00000508258 WFS1O76024 890 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 NR3C2P08235 984 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 USP17L8P0C7I0 530 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 TIMP2P16035 220 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 RAB15P59190 212 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 PTK2Q05397 1052 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 ERFEQ4G0M1 354 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 MRPL14Q6P1L8 145 aaKnown RBP3.41□□□□□ -1.86
SMN2-208ENST00000508258 TREML4Q6UXN2 200 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 MPNDQ8N594 471 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 GPKOWQ92917 476 aaPredicted RBP eCLIP3.41□□□□□ -1.86
SMN2-208ENST00000508258 SLC10A4Q96EP9 437 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 ZFP42Q96MM3 310 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 ZFAND3Q9H8U3 227 aa3.41□□□□□ -1.86
SMN2-208ENST00000508258 ZNF330Q9Y3S2 320 aaPredicted RBP3.41□□□□□ -1.86
SMN2-208ENST00000508258 BMP2P12643 396 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 PDIA4P13667 645 aaKnown RBP3.4□□□□□ -1.87
SMN2-208ENST00000508258 VEGFBP49765 207 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 SH3BP5LQ7L8J4 393 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 SH3RF1Q7Z6J0 888 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 CCDC116Q8IYX3 515 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 SLC16A10Q8TF71 515 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 ITPKCQ96DU7 683 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 CDK15Q96Q40 435 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 GDPD2Q9HCC8 539 aa3.4□□□□□ -1.87
SMN2-208ENST00000508258 HMX1Q9NP08 348 aaPredicted RBP3.4□□□□□ -1.87
SMN2-208ENST00000508258 SOBPA7XYQ1 873 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 TERTO14746 1132 aaKnown RBP3.39□□□□□ -1.87
SMN2-208ENST00000508258 MAN1A2O60476 641 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 GRM5P41594 1212 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 PDXDC2PQ6P474 469 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 DZIP3Q86Y13 1208 aaKnown RBP3.39□□□□□ -1.87
SMN2-208ENST00000508258 TRMT44Q8IYL2 757 aaKnown RBP3.39□□□□□ -1.87
SMN2-208ENST00000508258 EPS8L1Q8TE68 723 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 CCDC97Q96F63 343 aaPredicted RBP3.39□□□□□ -1.87
SMN2-208ENST00000508258 GJD4Q96KN9 370 aaPredicted RBP3.39□□□□□ -1.87
SMN2-208ENST00000508258 C1QTNF2Q9BXJ5 285 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 PGPEP1Q9NXJ5 209 aa3.39□□□□□ -1.87
SMN2-208ENST00000508258 ZC3H4Q9UPT8 1303 aaKnown RBP3.39□□□□□ -1.87
SMN2-208ENST00000508258 NBPF20Q3BBV1 942 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 PPP1R26Q5T8A7 1209 aaPredicted RBP3.38□□□□□ -1.87
SMN2-208ENST00000508258 LINC00528Q8N1L1 170 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 ADAM32Q8TC27 787 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 KCTD15Q96SI1 283 aaPredicted RBP3.38□□□□□ -1.87
SMN2-208ENST00000508258 TRAIPQ9BWF2 469 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 PRM3Q9NNZ6 103 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 NXF1Q9UBU9 619 aaKnown RBP3.38□□□□□ -1.87
SMN2-208ENST00000508258 CDV3Q9UKY7 258 aaKnown RBP3.38□□□□□ -1.87
SMN2-208ENST00000508258 TBC1D2BQ9UPU7 963 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 MAP4K5Q9Y4K4 846 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 EMILIN1Q9Y6C2 1016 aa3.38□□□□□ -1.87
SMN2-208ENST00000508258 POM121CA8CG34 1229 aa3.37□□□□□ -1.87
SMN2-208ENST00000508258 GPR37L1O60883 481 aa3.37□□□□□ -1.87
SMN2-208ENST00000508258 DHX9Q08211 1270 aaKnown RBP3.37□□□□□ -1.87
SMN2-208ENST00000508258 NFX1Q12986 1120 aaKnown RBP3.37□□□□□ -1.87
SMN2-208ENST00000508258 CBLBQ13191 982 aa3.37□□□□□ -1.87
SMN2-208ENST00000508258 IRF5Q13568 498 aa3.37□□□□□ -1.87
SMN2-208ENST00000508258 WWC1Q8IX03 1113 aa3.37□□□□□ -1.87
SMN2-208ENST00000508258 MEIOBQ8N635 442 aa3.37□□□□□ -1.87
SMN2-208ENST00000508258 TSEN34Q9BSV6 310 aaKnown RBP3.37□□□□□ -1.87
SMN2-208ENST00000508258 KLF16Q9BXK1 252 aaPredicted RBP3.37□□□□□ -1.87
SMN2-208ENST00000508258 PPP1R15AO75807 674 aaPredicted RBP3.36□□□□□ -1.87
SMN2-208ENST00000508258 ABL2P42684 1182 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 RELBQ01201 579 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 IRF7Q92985 503 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 GLMNQ92990 594 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 TRIM34Q9BYJ4 488 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 GPSM3Q9Y4H4 160 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 PCDHB9Q9Y5E1 797 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 NDUFB9Q9Y6M9 179 aa3.36□□□□□ -1.87
SMN2-208ENST00000508258 FIGNL2A6NMB9 653 aa3.35□□□□□ -1.87
SMN2-208ENST00000508258 TTLL8A6PVC2 850 aa3.35□□□□□ -1.87
SMN2-208ENST00000508258 INSM1Q01101 510 aaPredicted RBP3.35□□□□□ -1.87
SMN2-208ENST00000508258 WASHC4Q2M389 1173 aa3.35□□□□□ -1.87
SMN2-208ENST00000508258 INTS6LQ5JSJ4 861 aaKnown RBP3.35□□□□□ -1.87
SMN2-208ENST00000508258 ADAMTS19Q8TE59 1207 aa3.35□□□□□ -1.87
SMN2-208ENST00000508258 CALR3Q96L12 384 aaKnown RBP3.35□□□□□ -1.87
SMN2-208ENST00000508258 AGBL1Q96MI9 1066 aa3.35□□□□□ -1.87
SMN2-208ENST00000508258 POLMQ9NP87 494 aaPredicted RBP3.35□□□□□ -1.87
SMN2-208ENST00000508258 TMPRSS4Q9NRS4 437 aa3.35□□□□□ -1.87
SMN2-208ENST00000508258 ZBTB7CA1YPR0 619 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 ZBBXA8MT70 800 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 H3BM21 787 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 ERVH48-1M5A8F1 160 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 SRPK2P78362 688 aaKnown RBP3.34□□□□□ -1.87
SMN2-208ENST00000508258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.34□□□□□ -1.87
SMN2-208ENST00000508258 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.87
SMN2-208ENST00000508258 HDGFL1Q5TGJ6 251 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 KCTD17Q8N5Z5 321 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 RETREG2Q8NC44 543 aa3.34□□□□□ -1.87
SMN2-208ENST00000508258 ZNF784Q8NCA9 323 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms