RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 BECN2A8MW95 431 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 ERC2O15083 957 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 CCAR2Q8N163 923 aaKnown RBP9.61□□□□□ -0.87
PDE6A-202ENST00000508173 ANO2Q9NQ90 1003 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 KIF7Q2M1P5 1343 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 ELL2O00472 640 aaPredicted RBP9.61□□□□□ -0.87
PDE6A-202ENST00000508173 GPR162Q16538 588 aa9.61□□□□□ -0.87
PDE6A-202ENST00000508173 C22orf23Q9BZE7 217 aa9.6□□□□□ -0.87
PDE6A-202ENST00000508173 CDK13Q14004 1512 aaKnown RBP9.6□□□□□ -0.87
PDE6A-202ENST00000508173 CCDC173Q0VFZ6 552 aa9.6□□□□□ -0.87
PDE6A-202ENST00000508173 GRM1Q13255 1194 aa9.6□□□□□ -0.87
PDE6A-202ENST00000508173 CCDC7Q96M83 1385 aa9.6□□□□□ -0.87
PDE6A-202ENST00000508173 USP47Q96K76 1375 aa9.6□□□□□ -0.87
PDE6A-202ENST00000508173 ZPR1O75312 459 aa9.6□□□□□ -0.87
PDE6A-202ENST00000508173 NAP1L1P55209 391 aaKnown RBP9.59□□□□□ -0.87
PDE6A-202ENST00000508173 RRP12Q5JTH9 1297 aaKnown RBP9.59□□□□□ -0.87
PDE6A-202ENST00000508173 DRC1Q96MC2 740 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 CLEC11AQ9Y240 323 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 CDR1P51861 262 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 WDR78Q5VTH9 848 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 APAF1O14727 1248 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 RAPGEF6Q8TEU7 1601 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 NPHP3Q7Z494 1330 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 UQCRHLA0A096LP55 91 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 UQCRHP07919 91 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 CHMP4BP1P59074 171 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 PDCL3Q9H2J4 239 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 ZNF652Q9Y2D9 606 aa9.59□□□□□ -0.87
PDE6A-202ENST00000508173 NUP160Q12769 1436 aa9.58□□□□□ -0.88
PDE6A-202ENST00000508173 MATR3P43243 847 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDE6A-202ENST00000508173 CAVIN1Q6NZI2 390 aaKnown RBP9.58□□□□□ -0.88
PDE6A-202ENST00000508173 RFX1P22670 979 aa9.58□□□□□ -0.88
PDE6A-202ENST00000508173 PPP4R3AQ6IN85 833 aa9.58□□□□□ -0.88
PDE6A-202ENST00000508173 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
PDE6A-202ENST00000508173 EXOC5O00471 708 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 MPHOSPH8Q99549 860 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 API5Q9BZZ5 524 aaKnown RBP9.57□□□□□ -0.88
PDE6A-202ENST00000508173 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 GRPEL1Q9HAV7 217 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
PDE6A-202ENST00000508173 ERC1Q8IUD2 1116 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 CEP170Q5SW79 1584 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 CA8P35219 290 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 ZNF518AQ6AHZ1 1483 aa9.57□□□□□ -0.88
PDE6A-202ENST00000508173 E9PSI1 815 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 RRP9O43818 475 aaKnown RBP9.56□□□□□ -0.88
PDE6A-202ENST00000508173 SETQ01105 290 aaPredicted RBP9.56□□□□□ -0.88
PDE6A-202ENST00000508173 TXLNAP40222 546 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 TNIP1Q15025 636 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 TTC39AQ5SRH9 613 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 KCNH5Q8NCM2 988 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.56□□□□□ -0.88
PDE6A-202ENST00000508173 CCDC39Q9UFE4 941 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 SOGA3Q5TF21 947 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 BICDL1Q6ZP65 573 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 CCDC158Q5M9N0 1113 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 AK7Q96M32 723 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 MPHOSPH6Q99547 160 aaKnown RBP9.56□□□□□ -0.88
PDE6A-202ENST00000508173 MYO6Q9UM54 1294 aa9.56□□□□□ -0.88
PDE6A-202ENST00000508173 GAS2L2Q8NHY3 880 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 NACAP1Q9BZK3 213 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 IFT57Q9NWB7 429 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 GPS2Q13227 327 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 ZKSCAN2Q63HK3 967 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 KIAA0556O60303 1618 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 ZNF76P36508 570 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 LNPKQ9C0E8 428 aa9.55□□□□□ -0.88
PDE6A-202ENST00000508173 UGGT2Q9NYU1 1516 aa9.54□□□□□ -0.88
PDE6A-202ENST00000508173 PLCH2O75038 1416 aa9.54□□□□□ -0.88
PDE6A-202ENST00000508173 ZRSR2Q15696 482 aaKnown RBP9.54□□□□□ -0.88
PDE6A-202ENST00000508173 CTTNBP2Q8WZ74 1663 aa9.54□□□□□ -0.88
PDE6A-202ENST00000508173 PATL2C9JE40 543 aaKnown RBP9.54□□□□□ -0.88
PDE6A-202ENST00000508173 AIDAQ96BJ3 306 aa9.54□□□□□ -0.88
PDE6A-202ENST00000508173 TRPC5Q9UL62 973 aaPredicted RBP9.54□□□□□ -0.88
PDE6A-202ENST00000508173 NF2P35240 595 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 C19orf44Q9H6X5 657 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 HFM1A2PYH4 1435 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 PRPF40AO75400 957 aaKnown RBP9.53□□□□□ -0.88
PDE6A-202ENST00000508173 CRACR2BQ8N4Y2 399 aaPredicted RBP9.53□□□□□ -0.88
PDE6A-202ENST00000508173 CFAP74Q9C0B2 1584 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 IGHMBP2P38935 993 aaKnown RBP9.53□□□□□ -0.88
PDE6A-202ENST00000508173 ANKRD18AQ8IVF6 992 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 VTI1AQ96AJ9 217 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 REC8O95072 547 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 FOSBP53539 338 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
PDE6A-202ENST00000508173 GNAI1P63096 354 aa9.53□□□□□ -0.88
PDE6A-202ENST00000508173 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
PDE6A-202ENST00000508173 ANKRD30BQ9BXX2 1392 aa9.52□□□□□ -0.88
PDE6A-202ENST00000508173 ARAP1Q96P48 1450 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 STARD3NLO95772 234 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 UBTFL1P0CB47 393 aaPredicted RBP9.52□□□□□ -0.89
PDE6A-202ENST00000508173 SPC24Q8NBT2 197 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 USP21Q9UK80 565 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 ZHX1Q9UKY1 873 aaPredicted RBP9.52□□□□□ -0.89
PDE6A-202ENST00000508173 CAMSAP2Q08AD1 1489 aa9.52□□□□□ -0.89
PDE6A-202ENST00000508173 BCAR3O75815 825 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms