RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 MON2Q7Z3U7 1717 aa15.65■□□□□ 0.1
PTPN13-207ENST00000508063 C11orf95C9JLR9 678 aaPredicted RBP15.65■□□□□ 0.1
PTPN13-207ENST00000508063 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
PTPN13-207ENST00000508063 DISP2A7MBM2 1401 aa15.63■□□□□ 0.09
PTPN13-207ENST00000508063 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
PTPN13-207ENST00000508063 ARHGEF25Q86VW2 580 aa15.63■□□□□ 0.09
PTPN13-207ENST00000508063 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
PTPN13-207ENST00000508063 PARP4Q9UKK3 1724 aaKnown RBP15.63■□□□□ 0.09
PTPN13-207ENST00000508063 COL18A1P39060 1754 aa15.62■□□□□ 0.09
PTPN13-207ENST00000508063 TRIM37O94972 964 aa15.62■□□□□ 0.09
PTPN13-207ENST00000508063 EN1Q05925 392 aaPredicted RBP15.62■□□□□ 0.09
PTPN13-207ENST00000508063 TNS1Q9HBL0 1735 aaKnown RBP15.62■□□□□ 0.09
PTPN13-207ENST00000508063 WDR17Q8IZU2 1322 aa15.62■□□□□ 0.09
PTPN13-207ENST00000508063 SOX12O15370 315 aa15.61■□□□□ 0.09
PTPN13-207ENST00000508063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.09
PTPN13-207ENST00000508063 CDCA7Q9BWT1 371 aaPredicted RBP15.61■□□□□ 0.09
PTPN13-207ENST00000508063 USP31Q70CQ4 1352 aa15.61■□□□□ 0.09
PTPN13-207ENST00000508063 NINLQ9Y2I6 1382 aa15.61■□□□□ 0.09
PTPN13-207ENST00000508063 ABCC6O95255 1503 aa15.6■□□□□ 0.09
PTPN13-207ENST00000508063 APBA3O96018 575 aa15.6■□□□□ 0.09
PTPN13-207ENST00000508063 SLC12A5Q9H2X9 1139 aa15.6■□□□□ 0.09
PTPN13-207ENST00000508063 AXIN2Q9Y2T1 843 aa15.6■□□□□ 0.09
PTPN13-207ENST00000508063 PARD3Q8TEW0 1356 aa15.6■□□□□ 0.09
PTPN13-207ENST00000508063 EDC4Q6P2E9 1401 aaKnown RBP15.6■□□□□ 0.09
PTPN13-207ENST00000508063 CD163L1Q9NR16 1453 aa15.59■□□□□ 0.09
PTPN13-207ENST00000508063 NFAT5O94916 1531 aa15.59■□□□□ 0.09
PTPN13-207ENST00000508063 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
PTPN13-207ENST00000508063 CSB-PGBD3P0DP91 1061 aa15.59■□□□□ 0.09
PTPN13-207ENST00000508063 USP54Q70EL1 1684 aa15.58■□□□□ 0.08
PTPN13-207ENST00000508063 DDB1Q16531 1140 aa15.58■□□□□ 0.08
PTPN13-207ENST00000508063 CARD10Q9BWT7 1032 aa15.58■□□□□ 0.08
PTPN13-207ENST00000508063 RGPD5Q99666 1765 aa15.57■□□□□ 0.08
PTPN13-207ENST00000508063 NME9Q86XW9 330 aa15.57■□□□□ 0.08
PTPN13-207ENST00000508063 TESK2Q96S53 571 aa15.57■□□□□ 0.08
PTPN13-207ENST00000508063 OVOS2A0A0G2JMS6 1433 aa15.57■□□□□ 0.08
PTPN13-207ENST00000508063 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
PTPN13-207ENST00000508063 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
PTPN13-207ENST00000508063 EZH2Q15910 746 aaKnown RBP15.56■□□□□ 0.08
PTPN13-207ENST00000508063 CAMKK2Q96RR4 588 aa15.56■□□□□ 0.08
PTPN13-207ENST00000508063 TIMELESSQ9UNS1 1208 aa15.56■□□□□ 0.08
PTPN13-207ENST00000508063 A0A1W2PP64 1363 aa15.56■□□□□ 0.08
PTPN13-207ENST00000508063 WNK3Q9BYP7 1800 aa15.55■□□□□ 0.08
PTPN13-207ENST00000508063 LRRC37A3O60309 1634 aa15.55■□□□□ 0.08
PTPN13-207ENST00000508063 CCDC7Q96M83 1385 aa15.55■□□□□ 0.08
PTPN13-207ENST00000508063 TMF1P82094 1093 aa15.55■□□□□ 0.08
PTPN13-207ENST00000508063 SRCAPQ6ZRS2 3230 aa15.55■□□□□ 0.08
PTPN13-207ENST00000508063 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
PTPN13-207ENST00000508063 PSDA5PKW4 1024 aaPredicted RBP15.54■□□□□ 0.08
PTPN13-207ENST00000508063 USP47Q96K76 1375 aa15.53■□□□□ 0.08
PTPN13-207ENST00000508063 CDCA8Q53HL2 280 aa15.53■□□□□ 0.08
PTPN13-207ENST00000508063 LTN1O94822 1766 aa15.52■□□□□ 0.08
PTPN13-207ENST00000508063 EXOC5O00471 708 aa15.52■□□□□ 0.08
PTPN13-207ENST00000508063 R3HDM1Q15032 1099 aaKnown RBP15.52■□□□□ 0.08
PTPN13-207ENST00000508063 NBPF14Q5TI25 921 aa15.52■□□□□ 0.08
PTPN13-207ENST00000508063 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
PTPN13-207ENST00000508063 LRP5O75197 1615 aa15.52■□□□□ 0.08
PTPN13-207ENST00000508063 PEAK1Q9H792 1746 aa15.51■□□□□ 0.07
PTPN13-207ENST00000508063 ERBB3P21860 1342 aa15.51■□□□□ 0.07
PTPN13-207ENST00000508063 COG3Q96JB2 828 aa15.51■□□□□ 0.07
PTPN13-207ENST00000508063 ANKRD36BQ8N2N9 1353 aa15.5■□□□□ 0.07
PTPN13-207ENST00000508063 RREB1Q92766 1687 aa15.5■□□□□ 0.07
PTPN13-207ENST00000508063 BCL9O00512 1426 aa15.5■□□□□ 0.07
PTPN13-207ENST00000508063 MARCH10Q8NA82 808 aaPredicted RBP15.49■□□□□ 0.07
PTPN13-207ENST00000508063 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
PTPN13-207ENST00000508063 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
PTPN13-207ENST00000508063 BCL11BQ9C0K0 894 aaPredicted RBP15.49■□□□□ 0.07
PTPN13-207ENST00000508063 NLRP2Q9NX02 1062 aa15.49■□□□□ 0.07
PTPN13-207ENST00000508063 SBF2Q86WG5 1849 aa15.49■□□□□ 0.07
PTPN13-207ENST00000508063 PLSCR1O15162 318 aa15.48■□□□□ 0.07
PTPN13-207ENST00000508063 RGPD3A6NKT7 1758 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-207ENST00000508063 RGPD4Q7Z3J3 1758 aa15.47■□□□□ 0.07
PTPN13-207ENST00000508063 IL2RBP14784 551 aa15.47■□□□□ 0.07
PTPN13-207ENST00000508063 C1QBPQ07021 282 aaKnown RBP15.47■□□□□ 0.07
PTPN13-207ENST00000508063 NUP188Q5SRE5 1749 aa15.47■□□□□ 0.07
PTPN13-207ENST00000508063 TNS2Q63HR2 1409 aa15.47■□□□□ 0.07
PTPN13-207ENST00000508063 IP6K1Q92551 441 aa15.47■□□□□ 0.07
PTPN13-207ENST00000508063 FAM208AQ9UK61 1670 aaKnown RBP15.45■□□□□ 0.06
PTPN13-207ENST00000508063 AMPHP49418 695 aa15.44■□□□□ 0.06
PTPN13-207ENST00000508063 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
PTPN13-207ENST00000508063 HOXC9P31274 260 aa15.42■□□□□ 0.06
PTPN13-207ENST00000508063 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
PTPN13-207ENST00000508063 FYB1O15117 783 aa15.41■□□□□ 0.06
PTPN13-207ENST00000508063 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
PTPN13-207ENST00000508063 LTV1Q96GA3 475 aaPredicted RBP15.41■□□□□ 0.06
PTPN13-207ENST00000508063 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
PTPN13-207ENST00000508063 GGNBP2Q9H3C7 697 aa15.4■□□□□ 0.06
PTPN13-207ENST00000508063 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
PTPN13-207ENST00000508063 KIF20BQ96Q89 1820 aa15.39■□□□□ 0.05
PTPN13-207ENST00000508063 ZBTB22O15209 634 aa15.39■□□□□ 0.05
PTPN13-207ENST00000508063 PTF1AQ7RTS3 328 aa15.39■□□□□ 0.05
PTPN13-207ENST00000508063 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
PTPN13-207ENST00000508063 CCER1Q8TC90 406 aaPredicted RBP15.38■□□□□ 0.05
PTPN13-207ENST00000508063 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
PTPN13-207ENST00000508063 ACSBG1Q96GR2 724 aa15.37■□□□□ 0.05
PTPN13-207ENST00000508063 SPON1Q9HCB6 807 aa15.37■□□□□ 0.05
PTPN13-207ENST00000508063 KIF24Q5T7B8 1368 aa15.36■□□□□ 0.05
PTPN13-207ENST00000508063 KCNQ2O43526 872 aa15.36■□□□□ 0.05
PTPN13-207ENST00000508063 FBLN1P23142 703 aa15.36■□□□□ 0.05
PTPN13-207ENST00000508063 RRS1Q15050 365 aaKnown RBP15.36■□□□□ 0.05
PTPN13-207ENST00000508063 PROM2Q8N271 834 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms