RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 LRRC59Q96AG4 307 aaKnown RBP9.1□□□□□ -0.95
VEGFC-201ENST00000507638 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
VEGFC-201ENST00000507638 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
VEGFC-201ENST00000507638 ADGBQ8N7X0 1667 aa9.1□□□□□ -0.95
VEGFC-201ENST00000507638 PLXNC1O60486 1568 aa9.09□□□□□ -0.95
VEGFC-201ENST00000507638 TIAM1Q13009 1591 aa9.09□□□□□ -0.95
VEGFC-201ENST00000507638 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
VEGFC-201ENST00000507638 TATDN2Q93075 761 aa9.09□□□□□ -0.95
VEGFC-201ENST00000507638 CFAP65Q6ZU64 1925 aaKnown RBP9.08□□□□□ -0.96
VEGFC-201ENST00000507638 BAG6P46379 1132 aa9.08□□□□□ -0.96
VEGFC-201ENST00000507638 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
VEGFC-201ENST00000507638 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
VEGFC-201ENST00000507638 ATRNO75882 1429 aa9.07□□□□□ -0.96
VEGFC-201ENST00000507638 KIF3BO15066 747 aa9.07□□□□□ -0.96
VEGFC-201ENST00000507638 GIGYF1O75420 1035 aaPredicted RBP9.07□□□□□ -0.96
VEGFC-201ENST00000507638 BRINP3Q76B58 766 aa9.07□□□□□ -0.96
VEGFC-201ENST00000507638 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
VEGFC-201ENST00000507638 PPP1R1BQ9UD71 204 aaPredicted RBP9.07□□□□□ -0.96
VEGFC-201ENST00000507638 PNMA3Q9UL41 463 aa9.07□□□□□ -0.96
VEGFC-201ENST00000507638 ABCC3O15438 1527 aa9.06□□□□□ -0.96
VEGFC-201ENST00000507638 GPR37O15354 613 aa9.06□□□□□ -0.96
VEGFC-201ENST00000507638 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
VEGFC-201ENST00000507638 WNT2BQ93097 391 aa9.06□□□□□ -0.96
VEGFC-201ENST00000507638 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
VEGFC-201ENST00000507638 ZFRQ96KR1 1074 aaKnown RBP9.06□□□□□ -0.96
VEGFC-201ENST00000507638 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
VEGFC-201ENST00000507638 RTEL1-TNFRSF6BF6WH68 1400 aa9.05□□□□□ -0.96
VEGFC-201ENST00000507638 KDM5AP29375 1690 aaKnown RBP9.05□□□□□ -0.96
VEGFC-201ENST00000507638 NCOA2Q15596 1464 aa9.05□□□□□ -0.96
VEGFC-201ENST00000507638 ATF3P18847 181 aa9.05□□□□□ -0.96
VEGFC-201ENST00000507638 NUDT18Q6ZVK8 323 aa9.05□□□□□ -0.96
VEGFC-201ENST00000507638 SETD5Q9C0A6 1442 aa9.05□□□□□ -0.96
VEGFC-201ENST00000507638 PRXQ9BXM0 1461 aa9.04□□□□□ -0.96
VEGFC-201ENST00000507638 CHD4Q14839 1912 aa9.04□□□□□ -0.96
VEGFC-201ENST00000507638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.04□□□□□ -0.96
VEGFC-201ENST00000507638 MAP2K5Q13163 448 aa9.04□□□□□ -0.96
VEGFC-201ENST00000507638 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
VEGFC-201ENST00000507638 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
VEGFC-201ENST00000507638 UBR1Q8IWV7 1749 aa9.04□□□□□ -0.96
VEGFC-201ENST00000507638 MINK1Q8N4C8 1332 aaPredicted RBP9.04□□□□□ -0.96
VEGFC-201ENST00000507638 BRWD3Q6RI45 1802 aa9.03□□□□□ -0.96
VEGFC-201ENST00000507638 PNPLA6Q8IY17 1366 aa9.03□□□□□ -0.96
VEGFC-201ENST00000507638 SOWAHBA6NEL2 793 aa9.03□□□□□ -0.96
VEGFC-201ENST00000507638 DNAJB2P25686 324 aa9.03□□□□□ -0.96
VEGFC-201ENST00000507638 EYA1Q99502 592 aa9.03□□□□□ -0.96
VEGFC-201ENST00000507638 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
VEGFC-201ENST00000507638 ARHGAP23Q9P227 1491 aa9.02□□□□□ -0.96
VEGFC-201ENST00000507638 PRELPP51888 382 aa9.02□□□□□ -0.97
VEGFC-201ENST00000507638 THSD4Q6ZMP0 1018 aa9.02□□□□□ -0.97
VEGFC-201ENST00000507638 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
VEGFC-201ENST00000507638 DDX17Q92841 729 aaKnown RBP9.02□□□□□ -0.97
VEGFC-201ENST00000507638 KCTD12Q96CX2 325 aaKnown RBP9.02□□□□□ -0.97
VEGFC-201ENST00000507638 C19orf44Q9H6X5 657 aa9.02□□□□□ -0.97
VEGFC-201ENST00000507638 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
VEGFC-201ENST00000507638 SEPT9Q9UHD8 586 aaPredicted RBP9.02□□□□□ -0.97
VEGFC-201ENST00000507638 TROQ12816 1431 aaPredicted RBP9.02□□□□□ -0.97
VEGFC-201ENST00000507638 NKTRP30414 1462 aaKnown RBP9.02□□□□□ -0.97
VEGFC-201ENST00000507638 SLIT1O75093 1534 aa9.01□□□□□ -0.97
VEGFC-201ENST00000507638 RSPH4AQ5TD94 716 aa9.01□□□□□ -0.97
VEGFC-201ENST00000507638 PREX2Q70Z35 1606 aa9.01□□□□□ -0.97
VEGFC-201ENST00000507638 CLIP1P30622 1438 aa9□□□□□ -0.97
VEGFC-201ENST00000507638 COL13A1Q5TAT6 717 aaPredicted RBP9□□□□□ -0.97
VEGFC-201ENST00000507638 SIPA1L2Q9P2F8 1722 aaPredicted RBP9□□□□□ -0.97
VEGFC-201ENST00000507638 DHX29Q7Z478 1369 aaKnown RBP8.99□□□□□ -0.97
VEGFC-201ENST00000507638 NINLQ9Y2I6 1382 aa8.99□□□□□ -0.97
VEGFC-201ENST00000507638 MAST1Q9Y2H9 1570 aa8.99□□□□□ -0.97
VEGFC-201ENST00000507638 METTL3Q86U44 580 aaKnown RBP8.99□□□□□ -0.97
VEGFC-201ENST00000507638 PXYLP1Q8TE99 480 aa8.99□□□□□ -0.97
VEGFC-201ENST00000507638 PRR14Q9BWN1 585 aa8.99□□□□□ -0.97
VEGFC-201ENST00000507638 SPON1Q9HCB6 807 aa8.99□□□□□ -0.97
VEGFC-201ENST00000507638 TSR3Q9UJK0 312 aaKnown RBP8.99□□□□□ -0.97
VEGFC-201ENST00000507638 SYCP2Q9BX26 1530 aa8.99□□□□□ -0.97
VEGFC-201ENST00000507638 TET3O43151 1660 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 IRF6O14896 467 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 ZMYND10O75800 440 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 EZH2Q15910 746 aaKnown RBP8.98□□□□□ -0.97
VEGFC-201ENST00000507638 BARGINQ6ZT62 677 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 ZC3H15Q8WU90 426 aaKnown RBP8.98□□□□□ -0.97
VEGFC-201ENST00000507638 TMEM134Q9H6X4 195 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 UNC13BO14795 1591 aa8.98□□□□□ -0.97
VEGFC-201ENST00000507638 INO80Q9ULG1 1556 aaPredicted RBP8.98□□□□□ -0.97
VEGFC-201ENST00000507638 KCNQ2O43526 872 aa8.97□□□□□ -0.97
VEGFC-201ENST00000507638 KRT27Q7Z3Y8 459 aa8.97□□□□□ -0.97
VEGFC-201ENST00000507638 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
VEGFC-201ENST00000507638 CDC42BPAQ5VT25 1732 aa8.96□□□□□ -0.98
VEGFC-201ENST00000507638 TMEM2Q9UHN6 1383 aa8.96□□□□□ -0.98
VEGFC-201ENST00000507638 CHD2O14647 1828 aaKnown RBP8.96□□□□□ -0.98
VEGFC-201ENST00000507638 NCOA3Q9Y6Q9 1424 aa8.96□□□□□ -0.98
VEGFC-201ENST00000507638 UTRNP46939 3433 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 SMAPO00193 183 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 PPP4CP60510 307 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 SAMD7Q7Z3H4 446 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 SULF1Q8IWU6 871 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 ERVK-7P63135 1459 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 CAMSAP2Q08AD1 1489 aa8.95□□□□□ -0.98
VEGFC-201ENST00000507638 MROH1Q8NDA8 1641 aa8.94□□□□□ -0.98
VEGFC-201ENST00000507638 PPP1R15AO75807 674 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms