RNA–Protein interactions for RNA: ENST00000507468.5

AFF1-206, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 1 (best)

Gene AFF1, Length 1,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-206ENST00000507468 KIF24Q5T7B8 1368 aa28.37■■■□□ 2.13
AFF1-206ENST00000507468 COL18A1P39060 1754 aa28.36■■■□□ 2.13
AFF1-206ENST00000507468 NGLY1Q96IV0 654 aa28.35■■■□□ 2.13
AFF1-206ENST00000507468 COL14A1Q05707 1796 aaKnown RBP28.35■■■□□ 2.13
AFF1-206ENST00000507468 RTL1A6NKG5 1358 aa28.35■■■□□ 2.13
AFF1-206ENST00000507468 FLT4P35916 1363 aa28.35■■■□□ 2.13
AFF1-206ENST00000507468 LMO7Q8WWI1 1683 aa28.34■■■□□ 2.13
AFF1-206ENST00000507468 HSP90AB2PQ58FF8 381 aa28.34■■■□□ 2.13
AFF1-206ENST00000507468 CAMTA1Q9Y6Y1 1673 aa28.33■■■□□ 2.13
AFF1-206ENST00000507468 ABCC6O95255 1503 aa28.33■■■□□ 2.13
AFF1-206ENST00000507468 BTG4Q9NY30 223 aa28.33■■■□□ 2.13
AFF1-206ENST00000507468 FNBP4Q8N3X1 1017 aaPredicted RBP28.32■■■□□ 2.12
AFF1-206ENST00000507468 SLIT2O94813 1529 aa28.31■■■□□ 2.12
AFF1-206ENST00000507468 BLMP54132 1417 aaPredicted RBP28.31■■■□□ 2.12
AFF1-206ENST00000507468 CDK12Q9NYV4 1490 aaPredicted RBP28.3■■■□□ 2.12
AFF1-206ENST00000507468 INSRP06213 1382 aa28.3■■■□□ 2.12
AFF1-206ENST00000507468 PLCH1Q4KWH8 1693 aa28.29■■■□□ 2.12
AFF1-206ENST00000507468 RGPD5Q99666 1765 aa28.27■■■□□ 2.12
AFF1-206ENST00000507468 COL5A2P05997 1499 aaPredicted RBP28.27■■■□□ 2.12
AFF1-206ENST00000507468 ANKRD24Q8TF21 1146 aa28.27■■■□□ 2.12
AFF1-206ENST00000507468 AFF2P51816 1311 aa28.26■■■□□ 2.12
AFF1-206ENST00000507468 LTV1Q96GA3 475 aaPredicted RBP28.26■■■□□ 2.11
AFF1-206ENST00000507468 BCL9LQ86UU0 1499 aa28.25■■■□□ 2.11
AFF1-206ENST00000507468 STRN4Q9NRL3 753 aa28.25■■■□□ 2.11
AFF1-206ENST00000507468 ERBB3P21860 1342 aa28.25■■■□□ 2.11
AFF1-206ENST00000507468 EVA1CP58658 441 aa28.24■■■□□ 2.11
AFF1-206ENST00000507468 USP21Q9UK80 565 aa28.24■■■□□ 2.11
AFF1-206ENST00000507468 NWD2Q9ULI1 1742 aa28.24■■■□□ 2.11
AFF1-206ENST00000507468 EIF4A2Q14240 407 aaKnown RBP28.23■■■□□ 2.11
AFF1-206ENST00000507468 UNC5CLQ8IV45 518 aa28.23■■■□□ 2.11
AFF1-206ENST00000507468 CFAP53Q96M91 514 aa28.23■■■□□ 2.11
AFF1-206ENST00000507468 COL3A1P02461 1466 aaPredicted RBP28.23■■■□□ 2.11
AFF1-206ENST00000507468 NRAPQ86VF7 1730 aa28.21■■■□□ 2.11
AFF1-206ENST00000507468 MIER1Q8N108 512 aa28.21■■■□□ 2.11
AFF1-206ENST00000507468 WDR17Q8IZU2 1322 aa28.21■■■□□ 2.11
AFF1-206ENST00000507468 CCDC184Q52MB2 194 aa28.21■■■□□ 2.11
AFF1-206ENST00000507468 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
AFF1-206ENST00000507468 CSB-PGBD3P0DP91 1061 aa28.2■■■□□ 2.1
AFF1-206ENST00000507468 IL13P35225 146 aa28.2■■■□□ 2.1
AFF1-206ENST00000507468 DIAPH1O60610 1272 aaKnown RBP28.19■■■□□ 2.1
AFF1-206ENST00000507468 TOM1L2Q6ZVM7 507 aa28.15■■■□□ 2.1
AFF1-206ENST00000507468 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.15■■■□□ 2.1
AFF1-206ENST00000507468 VPS72Q15906 364 aa28.15■■■□□ 2.1
AFF1-206ENST00000507468 NBPF6Q5VWK0 638 aa28.15■■■□□ 2.1
AFF1-206ENST00000507468 NBPF4Q96M43 638 aa28.15■■■□□ 2.1
AFF1-206ENST00000507468 EYA1Q99502 592 aa28.15■■■□□ 2.1
AFF1-206ENST00000507468 NLRP2Q9NX02 1062 aa28.15■■■□□ 2.1
AFF1-206ENST00000507468 CRB1P82279 1406 aa28.14■■■□□ 2.09
AFF1-206ENST00000507468 ZNF772Q68DY9 489 aaPredicted RBP28.13■■■□□ 2.09
AFF1-206ENST00000507468 RGS17Q9UGC6 210 aaPredicted RBP28.13■■■□□ 2.09
AFF1-206ENST00000507468 CARD10Q9BWT7 1032 aa28.12■■■□□ 2.09
AFF1-206ENST00000507468 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
AFF1-206ENST00000507468 TRPC5Q9UL62 973 aaPredicted RBP28.12■■■□□ 2.09
AFF1-206ENST00000507468 ATRNO75882 1429 aa28.11■■■□□ 2.09
AFF1-206ENST00000507468 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
AFF1-206ENST00000507468 SPATA31A5Q5VU36 1347 aa28.11■■■□□ 2.09
AFF1-206ENST00000507468 SPATA31A7Q8IWB4 1347 aa28.11■■■□□ 2.09
AFF1-206ENST00000507468 QTRT2Q9H974 415 aaKnown RBP28.1■■■□□ 2.09
AFF1-206ENST00000507468 NUDCQ9Y266 331 aa28.1■■■□□ 2.09
AFF1-206ENST00000507468 CCDC9Q9Y3X0 531 aaKnown RBP28.1■■■□□ 2.09
AFF1-206ENST00000507468 SPATA31A1Q5TZJ5 1347 aa28.1■■■□□ 2.09
AFF1-206ENST00000507468 IGSF1Q8N6C5 1336 aa28.1■■■□□ 2.09
AFF1-206ENST00000507468 RGPD2P0DJD1 1756 aa28.1■■■□□ 2.09
AFF1-206ENST00000507468 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
AFF1-206ENST00000507468 CCER2I3L3R5 266 aa28.09■■■□□ 2.09
AFF1-206ENST00000507468 U2SURPO15042 1029 aaKnown RBP28.09■■■□□ 2.09
AFF1-206ENST00000507468 USHBP1Q8N6Y0 703 aa28.09■■■□□ 2.09
AFF1-206ENST00000507468 USP35Q9P2H5 1018 aa28.09■■■□□ 2.09
AFF1-206ENST00000507468 RGPD1P0DJD0 1748 aa28.07■■■□□ 2.08
AFF1-206ENST00000507468 GJD4Q96KN9 370 aaPredicted RBP28.07■■■□□ 2.08
AFF1-206ENST00000507468 NCAPD2Q15021 1401 aa28.06■■■□□ 2.08
AFF1-206ENST00000507468 U2AF1L5P0DN76 240 aaPredicted RBP28.04■■■□□ 2.08
AFF1-206ENST00000507468 U2AF1Q01081 240 aaKnown RBP eCLIP28.04■■■□□ 2.08
AFF1-206ENST00000507468 SULT6B1Q6IMI4 303 aa28.04■■■□□ 2.08
AFF1-206ENST00000507468 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
AFF1-206ENST00000507468 TCP11L2Q8N4U5 519 aa28.04■■■□□ 2.08
AFF1-206ENST00000507468 PNISRQ8TF01 805 aaKnown RBP28.03■■■□□ 2.08
AFF1-206ENST00000507468 HMOX1P09601 288 aa28.02■■■□□ 2.08
AFF1-206ENST00000507468 THRAP3Q9Y2W1 955 aaKnown RBP28.02■■■□□ 2.08
AFF1-206ENST00000507468 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
AFF1-206ENST00000507468 KDRP35968 1356 aa28.01■■■□□ 2.08
AFF1-206ENST00000507468 GLI3P10071 1580 aa28.01■■■□□ 2.07
AFF1-206ENST00000507468 WDR43Q15061 677 aaKnown RBP eCLIP28.01■■■□□ 2.07
AFF1-206ENST00000507468 BARGINQ6ZT62 677 aa27.99■■■□□ 2.07
AFF1-206ENST00000507468 FAM98CQ17RN3 349 aaKnown RBP27.98■■■□□ 2.07
AFF1-206ENST00000507468 ADAMTS8Q9UP79 889 aa27.98■■■□□ 2.07
AFF1-206ENST00000507468 RBM6P78332 1123 aaKnown RBP27.97■■■□□ 2.07
AFF1-206ENST00000507468 DISP2A7MBM2 1401 aa27.97■■■□□ 2.07
AFF1-206ENST00000507468 IL2RBP14784 551 aa27.96■■■□□ 2.07
AFF1-206ENST00000507468 RAPGEF4Q8WZA2 1011 aa27.96■■■□□ 2.07
AFF1-206ENST00000507468 RSPH6AQ9H0K4 717 aa27.96■■■□□ 2.07
AFF1-206ENST00000507468 FCHSD2O94868 740 aa27.95■■■□□ 2.07
AFF1-206ENST00000507468 MEGF6O75095 1541 aa27.95■■■□□ 2.06
AFF1-206ENST00000507468 ONECUT3O60422 494 aaPredicted RBP27.94■■■□□ 2.06
AFF1-206ENST00000507468 RXRBP28702 533 aa27.94■■■□□ 2.06
AFF1-206ENST00000507468 TATP17735 454 aaPredicted RBP27.93■■■□□ 2.06
AFF1-206ENST00000507468 PRKAR2BP31323 418 aa27.93■■■□□ 2.06
AFF1-206ENST00000507468 FAM9BQ8IZU0 186 aa27.92■■■□□ 2.06
AFF1-206ENST00000507468 CDCA7Q9BWT1 371 aaPredicted RBP27.92■■■□□ 2.06
AFF1-206ENST00000507468 WNK3Q9BYP7 1800 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms