RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 CCDC116Q8IYX3 515 aa10.03□□□□□ -0.8
SPCS3-202ENST00000507001 DNMT3LQ9UJW3 386 aa10.02□□□□□ -0.81
SPCS3-202ENST00000507001 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
SPCS3-202ENST00000507001 MAGEB6P1A0A0J9YX57 407 aa10□□□□□ -0.81
SPCS3-202ENST00000507001 PDXDC2PQ6P474 469 aa10□□□□□ -0.81
SPCS3-202ENST00000507001 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
SPCS3-202ENST00000507001 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.99□□□□□ -0.81
SPCS3-202ENST00000507001 Q6ZVU0 165 aa9.99□□□□□ -0.81
SPCS3-202ENST00000507001 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
SPCS3-202ENST00000507001 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
SPCS3-202ENST00000507001 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
SPCS3-202ENST00000507001 C14orf37Q86TY3 774 aa9.97□□□□□ -0.81
SPCS3-202ENST00000507001 DDRGK1Q96HY6 314 aa9.97□□□□□ -0.81
SPCS3-202ENST00000507001 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
SPCS3-202ENST00000507001 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
SPCS3-202ENST00000507001 FKBPLQ9UIM3 349 aa9.96□□□□□ -0.82
SPCS3-202ENST00000507001 SPINT1O43278 529 aa9.95□□□□□ -0.82
SPCS3-202ENST00000507001 CTDSPL2Q05D32 466 aa9.95□□□□□ -0.82
SPCS3-202ENST00000507001 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
SPCS3-202ENST00000507001 DHX9Q08211 1270 aaKnown RBP9.94□□□□□ -0.82
SPCS3-202ENST00000507001 KCNMA1Q12791 1236 aa9.94□□□□□ -0.82
SPCS3-202ENST00000507001 IL27Q8NEV9 243 aa9.94□□□□□ -0.82
SPCS3-202ENST00000507001 SLC10A4Q96EP9 437 aa9.94□□□□□ -0.82
SPCS3-202ENST00000507001 ARHGAP9Q9BRR9 750 aa9.94□□□□□ -0.82
SPCS3-202ENST00000507001 FAM117AQ9C073 453 aa9.94□□□□□ -0.82
SPCS3-202ENST00000507001 PTSQ03393 145 aa9.93□□□□□ -0.82
SPCS3-202ENST00000507001 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
SPCS3-202ENST00000507001 GPSM3Q9Y4H4 160 aa9.93□□□□□ -0.82
SPCS3-202ENST00000507001 KCTD15Q96SI1 283 aaPredicted RBP9.92□□□□□ -0.82
SPCS3-202ENST00000507001 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
SPCS3-202ENST00000507001 PPP2R2DQ66LE6 453 aa9.91□□□□□ -0.82
SPCS3-202ENST00000507001 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
SPCS3-202ENST00000507001 KRT76Q01546 638 aa9.9□□□□□ -0.82
SPCS3-202ENST00000507001 CBLBQ13191 982 aa9.9□□□□□ -0.82
SPCS3-202ENST00000507001 SH3D19Q5HYK7 790 aa9.9□□□□□ -0.82
SPCS3-202ENST00000507001 ZBTB33Q86T24 672 aa9.9□□□□□ -0.82
SPCS3-202ENST00000507001 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
SPCS3-202ENST00000507001 LRRN4Q8WUT4 740 aa9.89□□□□□ -0.83
SPCS3-202ENST00000507001 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPCS3-202ENST00000507001 SLC35F4A4IF30 521 aa9.88□□□□□ -0.83
SPCS3-202ENST00000507001 GSK3AP49840 483 aa9.88□□□□□ -0.83
SPCS3-202ENST00000507001 PTK2Q05397 1052 aa9.88□□□□□ -0.83
SPCS3-202ENST00000507001 INTS6LQ5JSJ4 861 aaKnown RBP9.88□□□□□ -0.83
SPCS3-202ENST00000507001 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
SPCS3-202ENST00000507001 OCSTAMPQ9BR26 566 aa9.88□□□□□ -0.83
SPCS3-202ENST00000507001 NR6A1Q15406 480 aa9.86□□□□□ -0.83
SPCS3-202ENST00000507001 NBPF20Q3BBV1 942 aa9.86□□□□□ -0.83
SPCS3-202ENST00000507001 RNF225M0QZC1 329 aaPredicted RBP9.85□□□□□ -0.83
SPCS3-202ENST00000507001 CNTNAP3BQ96NU0 1288 aa9.85□□□□□ -0.83
SPCS3-202ENST00000507001 CNTNAP3Q9BZ76 1288 aa9.85□□□□□ -0.83
SPCS3-202ENST00000507001 FIGNL2A6NMB9 653 aa9.84□□□□□ -0.83
SPCS3-202ENST00000507001 ITGA6P23229 1130 aa9.84□□□□□ -0.83
SPCS3-202ENST00000507001 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
SPCS3-202ENST00000507001 PNMA1Q8ND90 353 aa9.84□□□□□ -0.83
SPCS3-202ENST00000507001 COL25A1Q9BXS0 654 aaPredicted RBP9.84□□□□□ -0.83
SPCS3-202ENST00000507001 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
SPCS3-202ENST00000507001 ADAM32Q8TC27 787 aa9.83□□□□□ -0.84
SPCS3-202ENST00000507001 LOC100996750A0A140TA64 210 aa9.82□□□□□ -0.84
SPCS3-202ENST00000507001 SLURP2P0DP57 97 aa9.82□□□□□ -0.84
SPCS3-202ENST00000507001 CTSOP43234 321 aaPredicted RBP9.82□□□□□ -0.84
SPCS3-202ENST00000507001 KRTAP4-6Q9BYQ5 205 aa9.82□□□□□ -0.84
SPCS3-202ENST00000507001 RNF217Q8TC41 542 aa9.81□□□□□ -0.84
SPCS3-202ENST00000507001 ADAMTS8Q9UP79 889 aa9.81□□□□□ -0.84
SPCS3-202ENST00000507001 RELBQ01201 579 aa9.8□□□□□ -0.84
SPCS3-202ENST00000507001 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
SPCS3-202ENST00000507001 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
SPCS3-202ENST00000507001 AGBL1Q96MI9 1066 aa9.8□□□□□ -0.84
SPCS3-202ENST00000507001 INSM2Q96T92 566 aaPredicted RBP9.8□□□□□ -0.84
SPCS3-202ENST00000507001 ADH1AP07327 375 aa9.79□□□□□ -0.84
SPCS3-202ENST00000507001 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
SPCS3-202ENST00000507001 SV2AQ7L0J3 742 aa9.79□□□□□ -0.84
SPCS3-202ENST00000507001 TMEM151AQ8N4L1 468 aa9.79□□□□□ -0.84
SPCS3-202ENST00000507001 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
SPCS3-202ENST00000507001 SENP3-EIF4A1A0A087X0R7 540 aa9.78□□□□□ -0.84
SPCS3-202ENST00000507001 ESPNB1AK53 854 aa9.78□□□□□ -0.84
SPCS3-202ENST00000507001 AP1G2O75843 785 aa9.78□□□□□ -0.84
SPCS3-202ENST00000507001 RASSF7Q02833 373 aa9.78□□□□□ -0.84
SPCS3-202ENST00000507001 SEPT12Q8IYM1 358 aa9.78□□□□□ -0.84
SPCS3-202ENST00000507001 ZNF784Q8NCA9 323 aaPredicted RBP9.78□□□□□ -0.84
SPCS3-202ENST00000507001 PCMTD1Q96MG8 357 aaPredicted RBP9.78□□□□□ -0.84
SPCS3-202ENST00000507001 POLMQ9NP87 494 aaPredicted RBP9.78□□□□□ -0.84
SPCS3-202ENST00000507001 LILRA1O75019 489 aa9.77□□□□□ -0.85
SPCS3-202ENST00000507001 GDF11O95390 407 aa9.76□□□□□ -0.85
SPCS3-202ENST00000507001 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
SPCS3-202ENST00000507001 PTGIRP43119 386 aa9.76□□□□□ -0.85
SPCS3-202ENST00000507001 FOXD4L5Q5VV16 416 aaPredicted RBP9.76□□□□□ -0.85
SPCS3-202ENST00000507001 VWA5B2Q8N398 1253 aa9.76□□□□□ -0.85
SPCS3-202ENST00000507001 SVOPQ8N4V2 548 aa9.76□□□□□ -0.85
SPCS3-202ENST00000507001 TMPRSS4Q9NRS4 437 aa9.76□□□□□ -0.85
SPCS3-202ENST00000507001 CDC14CA4D256 554 aa9.75□□□□□ -0.85
SPCS3-202ENST00000507001 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
SPCS3-202ENST00000507001 DZIP3Q86Y13 1208 aaKnown RBP9.75□□□□□ -0.85
SPCS3-202ENST00000507001 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
SPCS3-202ENST00000507001 KDF1Q8NAX2 398 aaPredicted RBP9.75□□□□□ -0.85
SPCS3-202ENST00000507001 EPS8L1Q8TE68 723 aa9.75□□□□□ -0.85
SPCS3-202ENST00000507001 ZNF395Q9H8N7 513 aaPredicted RBP9.75□□□□□ -0.85
SPCS3-202ENST00000507001 HMX1Q9NP08 348 aaPredicted RBP9.75□□□□□ -0.85
SPCS3-202ENST00000507001 ARHGEF15O94989 841 aa9.74□□□□□ -0.85
SPCS3-202ENST00000507001 ADD1P35611 737 aaKnown RBP9.73□□□□□ -0.85
SPCS3-202ENST00000507001 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms