RNA–Protein interactions for RNA: ENST00000506772.2

HMGN2P4-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 4, humanhuman

BASIC

Gene HMGN2P4, Length 381 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P4-201ENST00000506772 GLI3P10071 1580 aa15.28■□□□□ 0.04
HMGN2P4-201ENST00000506772 PARD3Q8TEW0 1356 aa15.27■□□□□ 0.04
HMGN2P4-201ENST00000506772 CCER2I3L3R5 266 aa15.27■□□□□ 0.04
HMGN2P4-201ENST00000506772 USP54Q70EL1 1684 aa15.27■□□□□ 0.03
HMGN2P4-201ENST00000506772 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
HMGN2P4-201ENST00000506772 SPATA31A1Q5TZJ5 1347 aa15.25■□□□□ 0.03
HMGN2P4-201ENST00000506772 USP35Q9P2H5 1018 aa15.25■□□□□ 0.03
HMGN2P4-201ENST00000506772 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
HMGN2P4-201ENST00000506772 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
HMGN2P4-201ENST00000506772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGN2P4-201ENST00000506772 MIER1Q8N108 512 aa15.24■□□□□ 0.03
HMGN2P4-201ENST00000506772 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
HMGN2P4-201ENST00000506772 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
HMGN2P4-201ENST00000506772 BLMP54132 1417 aaPredicted RBP15.23■□□□□ 0.03
HMGN2P4-201ENST00000506772 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
HMGN2P4-201ENST00000506772 MYBBP1AQ9BQG0 1328 aaKnown RBP15.22■□□□□ 0.03
HMGN2P4-201ENST00000506772 SOX12O15370 315 aa15.22■□□□□ 0.03
HMGN2P4-201ENST00000506772 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
HMGN2P4-201ENST00000506772 TCP11L2Q8N4U5 519 aa15.22■□□□□ 0.03
HMGN2P4-201ENST00000506772 NRAPQ86VF7 1730 aa15.22■□□□□ 0.03
HMGN2P4-201ENST00000506772 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
HMGN2P4-201ENST00000506772 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
HMGN2P4-201ENST00000506772 FYB1O15117 783 aa15.2■□□□□ 0.02
HMGN2P4-201ENST00000506772 CSB-PGBD3P0DP91 1061 aa15.2■□□□□ 0.02
HMGN2P4-201ENST00000506772 BAG6P46379 1132 aa15.2■□□□□ 0.02
HMGN2P4-201ENST00000506772 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
HMGN2P4-201ENST00000506772 TOM1L2Q6ZVM7 507 aa15.2■□□□□ 0.02
HMGN2P4-201ENST00000506772 MAP2P11137 1827 aaKnown RBP15.2■□□□□ 0.02
HMGN2P4-201ENST00000506772 SLIT3O75094 1523 aa15.19■□□□□ 0.02
HMGN2P4-201ENST00000506772 FAM196AQ6ZSG2 479 aa15.19■□□□□ 0.02
HMGN2P4-201ENST00000506772 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
HMGN2P4-201ENST00000506772 PIK3C2AO00443 1686 aa15.19■□□□□ 0.02
HMGN2P4-201ENST00000506772 USP31Q70CQ4 1352 aa15.18■□□□□ 0.02
HMGN2P4-201ENST00000506772 CRB1P82279 1406 aa15.17■□□□□ 0.02
HMGN2P4-201ENST00000506772 CAMTA1Q9Y6Y1 1673 aa15.17■□□□□ 0.02
HMGN2P4-201ENST00000506772 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
HMGN2P4-201ENST00000506772 CDCA7Q9BWT1 371 aaPredicted RBP15.17■□□□□ 0.02
HMGN2P4-201ENST00000506772 COL5A2P05997 1499 aaPredicted RBP15.16■□□□□ 0.02
HMGN2P4-201ENST00000506772 NME9Q86XW9 330 aa15.16■□□□□ 0.02
HMGN2P4-201ENST00000506772 COG3Q96JB2 828 aa15.16■□□□□ 0.02
HMGN2P4-201ENST00000506772 OVOS2A0A0J9YW53 1432 aa15.16■□□□□ 0.02
HMGN2P4-201ENST00000506772 OVOS2Q6IE36 1432 aa15.16■□□□□ 0.02
HMGN2P4-201ENST00000506772 WDR17Q8IZU2 1322 aa15.15■□□□□ 0.02
HMGN2P4-201ENST00000506772 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
HMGN2P4-201ENST00000506772 PPP2R1AP30153 589 aa15.13■□□□□ 0.01
HMGN2P4-201ENST00000506772 DDB1Q16531 1140 aa15.13■□□□□ 0.01
HMGN2P4-201ENST00000506772 BRWD3Q6RI45 1802 aa15.13■□□□□ 0.01
HMGN2P4-201ENST00000506772 FAM182BQ5T319 152 aa15.12■□□□□ 0.01
HMGN2P4-201ENST00000506772 DEFB132Q7Z7B7 95 aa15.12■□□□□ 0.01
HMGN2P4-201ENST00000506772 CARD10Q9BWT7 1032 aa15.12■□□□□ 0.01
HMGN2P4-201ENST00000506772 GGNBP2Q9H3C7 697 aa15.12■□□□□ 0.01
HMGN2P4-201ENST00000506772 AXIN2Q9Y2T1 843 aa15.12■□□□□ 0.01
HMGN2P4-201ENST00000506772 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
HMGN2P4-201ENST00000506772 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
HMGN2P4-201ENST00000506772 TRIM37O94972 964 aa15.1■□□□□ 0.01
HMGN2P4-201ENST00000506772 ABCC6O95255 1503 aa15.1■□□□□ 0.01
HMGN2P4-201ENST00000506772 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
HMGN2P4-201ENST00000506772 EXOC5O00471 708 aa15.09■□□□□ 0.01
HMGN2P4-201ENST00000506772 APBA3O96018 575 aa15.09■□□□□ 0.01
HMGN2P4-201ENST00000506772 AMPHP49418 695 aa15.09■□□□□ 0.01
HMGN2P4-201ENST00000506772 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
HMGN2P4-201ENST00000506772 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
HMGN2P4-201ENST00000506772 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
HMGN2P4-201ENST00000506772 CFAP53Q96M91 514 aa15.08■□□□□ 0
HMGN2P4-201ENST00000506772 INSRP06213 1382 aa15.08■□□□□ 0
HMGN2P4-201ENST00000506772 LTN1O94822 1766 aa15.08■□□□□ 0
HMGN2P4-201ENST00000506772 NFAT5O94916 1531 aa15.07■□□□□ 0
HMGN2P4-201ENST00000506772 EN1Q05925 392 aaPredicted RBP15.07■□□□□ 0
HMGN2P4-201ENST00000506772 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
HMGN2P4-201ENST00000506772 IP6K1Q92551 441 aa15.06■□□□□ 0
HMGN2P4-201ENST00000506772 ERBB3P21860 1342 aa15.06■□□□□ 0
HMGN2P4-201ENST00000506772 OVOS2A0A0G2JMS6 1433 aa15.06■□□□□ 0
HMGN2P4-201ENST00000506772 EP400Q96L91 3159 aa15.05■□□□□ -0
HMGN2P4-201ENST00000506772 RGPD1P0DJD0 1748 aa15.05■□□□□ -0
HMGN2P4-201ENST00000506772 IL2RBP14784 551 aa15.04■□□□□ -0
HMGN2P4-201ENST00000506772 MTHFSP49914 203 aa15.04■□□□□ -0
HMGN2P4-201ENST00000506772 COL18A1P39060 1754 aa15.03■□□□□ -0
HMGN2P4-201ENST00000506772 RTL1A6NKG5 1358 aa15.03■□□□□ -0
HMGN2P4-201ENST00000506772 NBPF14Q5TI25 921 aa15.03■□□□□ -0
HMGN2P4-201ENST00000506772 PNISRQ8TF01 805 aaKnown RBP15.03■□□□□ -0
HMGN2P4-201ENST00000506772 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
HMGN2P4-201ENST00000506772 DISP2A7MBM2 1401 aa15.02■□□□□ -0
HMGN2P4-201ENST00000506772 TNNT2P45379 298 aaPredicted RBP15.02■□□□□ -0
HMGN2P4-201ENST00000506772 POLKQ9UBT6 870 aa15.02■□□□□ -0
HMGN2P4-201ENST00000506772 PARP4Q9UKK3 1724 aaKnown RBP15.02□□□□□ -0.01
HMGN2P4-201ENST00000506772 MAP3K19Q56UN5 1328 aa15.01□□□□□ -0.01
HMGN2P4-201ENST00000506772 HOXC9P31274 260 aa15.01□□□□□ -0.01
HMGN2P4-201ENST00000506772 EZH2Q15910 746 aaKnown RBP15.01□□□□□ -0.01
HMGN2P4-201ENST00000506772 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
HMGN2P4-201ENST00000506772 FLT4P35916 1363 aa15□□□□□ -0.01
HMGN2P4-201ENST00000506772 CCDC184Q52MB2 194 aa15□□□□□ -0.01
HMGN2P4-201ENST00000506772 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
HMGN2P4-201ENST00000506772 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
HMGN2P4-201ENST00000506772 NUDCQ9Y266 331 aa15□□□□□ -0.01
HMGN2P4-201ENST00000506772 PEAK1Q9H792 1746 aa15□□□□□ -0.01
HMGN2P4-201ENST00000506772 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
HMGN2P4-201ENST00000506772 MARCH10Q8NA82 808 aaPredicted RBP14.99□□□□□ -0.01
HMGN2P4-201ENST00000506772 RRS1Q15050 365 aaKnown RBP14.98□□□□□ -0.01
HMGN2P4-201ENST00000506772 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
HMGN2P4-201ENST00000506772 PLSCR1O15162 318 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms