RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZNF692Q9BU19 519 aaPredicted RBP18.33■□□□□ 0.52
TCOF1-209ENST00000506630 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
TCOF1-209ENST00000506630 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
TCOF1-209ENST00000506630 SLC12A5Q9H2X9 1139 aa18.32■□□□□ 0.52
TCOF1-209ENST00000506630 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
TCOF1-209ENST00000506630 CPDO75976 1380 aa18.31■□□□□ 0.52
TCOF1-209ENST00000506630 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
TCOF1-209ENST00000506630 NLRP13Q86W25 1043 aa18.31■□□□□ 0.52
TCOF1-209ENST00000506630 USP54Q70EL1 1684 aa18.31■□□□□ 0.52
TCOF1-209ENST00000506630 A0A1W2PP64 1363 aa18.3■□□□□ 0.52
TCOF1-209ENST00000506630 TTC21BQ7Z4L5 1316 aa18.3■□□□□ 0.52
TCOF1-209ENST00000506630 KCNQ2O43526 872 aa18.3■□□□□ 0.52
TCOF1-209ENST00000506630 GCP02774 474 aa18.3■□□□□ 0.52
TCOF1-209ENST00000506630 HSPA5P11021 654 aaKnown RBP18.29■□□□□ 0.52
TCOF1-209ENST00000506630 CDCA8Q53HL2 280 aa18.29■□□□□ 0.52
TCOF1-209ENST00000506630 SLIT3O75094 1523 aa18.28■□□□□ 0.52
TCOF1-209ENST00000506630 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
TCOF1-209ENST00000506630 NLRP6P59044 892 aa18.28■□□□□ 0.52
TCOF1-209ENST00000506630 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
TCOF1-209ENST00000506630 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
TCOF1-209ENST00000506630 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
TCOF1-209ENST00000506630 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.27■□□□□ 0.52
TCOF1-209ENST00000506630 RREB1Q92766 1687 aa18.27■□□□□ 0.52
TCOF1-209ENST00000506630 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
TCOF1-209ENST00000506630 LTN1O94822 1766 aa18.25■□□□□ 0.51
TCOF1-209ENST00000506630 COL18A1P39060 1754 aa18.25■□□□□ 0.51
TCOF1-209ENST00000506630 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
TCOF1-209ENST00000506630 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
TCOF1-209ENST00000506630 ANKRD36BQ8N2N9 1353 aa18.25■□□□□ 0.51
TCOF1-209ENST00000506630 OVOS2A0A0G2JMS6 1433 aa18.24■□□□□ 0.51
TCOF1-209ENST00000506630 OVOS2A0A0J9YW53 1432 aa18.24■□□□□ 0.51
TCOF1-209ENST00000506630 OVOS2Q6IE36 1432 aa18.24■□□□□ 0.51
TCOF1-209ENST00000506630 PLSCR1O15162 318 aa18.24■□□□□ 0.51
TCOF1-209ENST00000506630 POLR3GLQ9BT43 218 aa18.24■□□□□ 0.51
TCOF1-209ENST00000506630 AXIN2Q9Y2T1 843 aa18.24■□□□□ 0.51
TCOF1-209ENST00000506630 CRB1P82279 1406 aa18.23■□□□□ 0.51
TCOF1-209ENST00000506630 COL5A2P05997 1499 aaPredicted RBP18.23■□□□□ 0.51
TCOF1-209ENST00000506630 DDB1Q16531 1140 aa18.23■□□□□ 0.51
TCOF1-209ENST00000506630 NME9Q86XW9 330 aa18.22■□□□□ 0.51
TCOF1-209ENST00000506630 SOX12O15370 315 aa18.21■□□□□ 0.51
TCOF1-209ENST00000506630 TOM1L2Q6ZVM7 507 aa18.21■□□□□ 0.51
TCOF1-209ENST00000506630 NFAT5O94916 1531 aa18.2■□□□□ 0.5
TCOF1-209ENST00000506630 BCL11BQ9C0K0 894 aaPredicted RBP18.2■□□□□ 0.5
TCOF1-209ENST00000506630 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
TCOF1-209ENST00000506630 USP31Q70CQ4 1352 aa18.19■□□□□ 0.5
TCOF1-209ENST00000506630 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
TCOF1-209ENST00000506630 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
TCOF1-209ENST00000506630 ARHGEF25Q86VW2 580 aa18.17■□□□□ 0.5
TCOF1-209ENST00000506630 CDCA7Q9BWT1 371 aaPredicted RBP18.17■□□□□ 0.5
TCOF1-209ENST00000506630 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
TCOF1-209ENST00000506630 NSD3Q9BZ95 1437 aa18.15■□□□□ 0.5
TCOF1-209ENST00000506630 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
TCOF1-209ENST00000506630 ZBTB7AO95365 584 aa18.14■□□□□ 0.49
TCOF1-209ENST00000506630 WDR17Q8IZU2 1322 aa18.14■□□□□ 0.49
TCOF1-209ENST00000506630 PEAK1Q9H792 1746 aa18.13■□□□□ 0.49
TCOF1-209ENST00000506630 PTF1AQ7RTS3 328 aa18.13■□□□□ 0.49
TCOF1-209ENST00000506630 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
TCOF1-209ENST00000506630 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
TCOF1-209ENST00000506630 WNK3Q9BYP7 1800 aa18.13■□□□□ 0.49
TCOF1-209ENST00000506630 ABCC6O95255 1503 aa18.13■□□□□ 0.49
TCOF1-209ENST00000506630 RGPD3A6NKT7 1758 aaPredicted RBP18.12■□□□□ 0.49
TCOF1-209ENST00000506630 RGPD4Q7Z3J3 1758 aa18.12■□□□□ 0.49
TCOF1-209ENST00000506630 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
TCOF1-209ENST00000506630 PROM2Q8N271 834 aa18.12■□□□□ 0.49
TCOF1-209ENST00000506630 COG3Q96JB2 828 aa18.12■□□□□ 0.49
TCOF1-209ENST00000506630 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
TCOF1-209ENST00000506630 FBLN1P23142 703 aa18.11■□□□□ 0.49
TCOF1-209ENST00000506630 ATF5Q9Y2D1 282 aaPredicted RBP18.11■□□□□ 0.49
TCOF1-209ENST00000506630 BCL9O00512 1426 aa18.11■□□□□ 0.49
TCOF1-209ENST00000506630 LRRC37A3O60309 1634 aa18.11■□□□□ 0.49
TCOF1-209ENST00000506630 EXOC5O00471 708 aa18.1■□□□□ 0.49
TCOF1-209ENST00000506630 PTGER2P43116 358 aa18.1■□□□□ 0.49
TCOF1-209ENST00000506630 TXNRD1Q16881 649 aa18.1■□□□□ 0.49
TCOF1-209ENST00000506630 CARD10Q9BWT7 1032 aa18.1■□□□□ 0.49
TCOF1-209ENST00000506630 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
TCOF1-209ENST00000506630 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
TCOF1-209ENST00000506630 SLC15A2Q16348 729 aa18.09■□□□□ 0.49
TCOF1-209ENST00000506630 MAP2P11137 1827 aaKnown RBP18.09■□□□□ 0.49
TCOF1-209ENST00000506630 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
TCOF1-209ENST00000506630 FYB1O15117 783 aa18.08■□□□□ 0.48
TCOF1-209ENST00000506630 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
TCOF1-209ENST00000506630 ZNF784Q8NCA9 323 aaPredicted RBP18.07■□□□□ 0.48
TCOF1-209ENST00000506630 SBF2Q86WG5 1849 aa18.07■□□□□ 0.48
TCOF1-209ENST00000506630 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
TCOF1-209ENST00000506630 ADRA2BP18089 450 aa18.06■□□□□ 0.48
TCOF1-209ENST00000506630 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
TCOF1-209ENST00000506630 FHDC1Q9C0D6 1143 aaPredicted RBP18.06■□□□□ 0.48
TCOF1-209ENST00000506630 MTFR1LQ9H019 292 aa18.06■□□□□ 0.48
TCOF1-209ENST00000506630 RGPD2P0DJD1 1756 aa18.05■□□□□ 0.48
TCOF1-209ENST00000506630 PANK3Q9H999 370 aa18.05■□□□□ 0.48
TCOF1-209ENST00000506630 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
TCOF1-209ENST00000506630 CGNL1Q0VF96 1302 aa18.04■□□□□ 0.48
TCOF1-209ENST00000506630 MAP3K19Q56UN5 1328 aa18.01■□□□□ 0.47
TCOF1-209ENST00000506630 AMPHP49418 695 aa18■□□□□ 0.47
TCOF1-209ENST00000506630 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
TCOF1-209ENST00000506630 ARXQ96QS3 562 aa18■□□□□ 0.47
TCOF1-209ENST00000506630 ERBB3P21860 1342 aa17.99■□□□□ 0.47
TCOF1-209ENST00000506630 WASHC2AQ641Q2 1341 aa17.99■□□□□ 0.47
TCOF1-209ENST00000506630 TNS2Q63HR2 1409 aa17.99■□□□□ 0.47
TCOF1-209ENST00000506630 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms