RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 ZFP42Q96MM3 310 aa9.54□□□□□ -0.88
TRIO-208ENST00000506611 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
TRIO-208ENST00000506611 SLC10A4Q96EP9 437 aa9.53□□□□□ -0.88
TRIO-208ENST00000506611 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
TRIO-208ENST00000506611 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
TRIO-208ENST00000506611 CCDC116Q8IYX3 515 aa9.52□□□□□ -0.89
TRIO-208ENST00000506611 BANK1Q8NDB2 785 aa9.52□□□□□ -0.89
TRIO-208ENST00000506611 PURBQ96QR8 312 aaKnown RBP9.52□□□□□ -0.89
TRIO-208ENST00000506611 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
TRIO-208ENST00000506611 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
TRIO-208ENST00000506611 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
TRIO-208ENST00000506611 FBXO45P0C2W1 286 aa9.5□□□□□ -0.89
TRIO-208ENST00000506611 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
TRIO-208ENST00000506611 SOCS7O14512 581 aa9.49□□□□□ -0.89
TRIO-208ENST00000506611 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
TRIO-208ENST00000506611 CBLBQ13191 982 aa9.48□□□□□ -0.89
TRIO-208ENST00000506611 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
TRIO-208ENST00000506611 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
TRIO-208ENST00000506611 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
TRIO-208ENST00000506611 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
TRIO-208ENST00000506611 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
TRIO-208ENST00000506611 ZBBXA8MT70 800 aa9.46□□□□□ -0.9
TRIO-208ENST00000506611 ESPNB1AK53 854 aa9.46□□□□□ -0.9
TRIO-208ENST00000506611 C6orf118Q5T5N4 469 aa9.46□□□□□ -0.9
TRIO-208ENST00000506611 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
TRIO-208ENST00000506611 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
TRIO-208ENST00000506611 Q6ZVU0 165 aa9.45□□□□□ -0.9
TRIO-208ENST00000506611 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
TRIO-208ENST00000506611 SCARF1Q14162 830 aa9.44□□□□□ -0.9
TRIO-208ENST00000506611 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
TRIO-208ENST00000506611 ERVH48-1M5A8F1 160 aa9.43□□□□□ -0.9
TRIO-208ENST00000506611 TERTO14746 1132 aaKnown RBP9.43□□□□□ -0.9
TRIO-208ENST00000506611 RAB15P59190 212 aa9.43□□□□□ -0.9
TRIO-208ENST00000506611 NBPF20Q3BBV1 942 aa9.43□□□□□ -0.9
TRIO-208ENST00000506611 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
TRIO-208ENST00000506611 LILRA1O75019 489 aa9.42□□□□□ -0.9
TRIO-208ENST00000506611 BMP2P12643 396 aa9.42□□□□□ -0.9
TRIO-208ENST00000506611 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
TRIO-208ENST00000506611 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
TRIO-208ENST00000506611 SOS2Q07890 1332 aaPredicted RBP9.41□□□□□ -0.9
TRIO-208ENST00000506611 GIGYF1O75420 1035 aaPredicted RBP9.41□□□□□ -0.9
TRIO-208ENST00000506611 WFS1O76024 890 aa9.41□□□□□ -0.9
TRIO-208ENST00000506611 NR1H3Q13133 447 aa9.41□□□□□ -0.9
TRIO-208ENST00000506611 AGBL1Q96MI9 1066 aa9.41□□□□□ -0.9
TRIO-208ENST00000506611 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
TRIO-208ENST00000506611 ADD1P35611 737 aaKnown RBP9.4□□□□□ -0.9
TRIO-208ENST00000506611 VEGFBP49765 207 aa9.4□□□□□ -0.9
TRIO-208ENST00000506611 DHX9Q08211 1270 aaKnown RBP9.4□□□□□ -0.9
TRIO-208ENST00000506611 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.9
TRIO-208ENST00000506611 DNMT3LQ9UJW3 386 aa9.4□□□□□ -0.9
TRIO-208ENST00000506611 IRF5Q13568 498 aa9.39□□□□□ -0.91
TRIO-208ENST00000506611 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
TRIO-208ENST00000506611 NXF1Q9UBU9 619 aaKnown RBP9.39□□□□□ -0.91
TRIO-208ENST00000506611 SPINT1O43278 529 aa9.37□□□□□ -0.91
TRIO-208ENST00000506611 UPP2O95045 317 aa9.36□□□□□ -0.91
TRIO-208ENST00000506611 MCM6Q14566 821 aa9.36□□□□□ -0.91
TRIO-208ENST00000506611 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
TRIO-208ENST00000506611 RELBQ01201 579 aa9.35□□□□□ -0.91
TRIO-208ENST00000506611 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
TRIO-208ENST00000506611 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
TRIO-208ENST00000506611 TTLL8A6PVC2 850 aa9.34□□□□□ -0.91
TRIO-208ENST00000506611 H3BM21 787 aa9.34□□□□□ -0.91
TRIO-208ENST00000506611 MAN1A2O60476 641 aa9.34□□□□□ -0.91
TRIO-208ENST00000506611 ADH1AP07327 375 aa9.34□□□□□ -0.91
TRIO-208ENST00000506611 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
TRIO-208ENST00000506611 ZNF395Q9H8N7 513 aaPredicted RBP9.34□□□□□ -0.91
TRIO-208ENST00000506611 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
TRIO-208ENST00000506611 APBB1O00213 710 aa9.33□□□□□ -0.92
TRIO-208ENST00000506611 INSM2Q96T92 566 aaPredicted RBP9.33□□□□□ -0.92
TRIO-208ENST00000506611 SCTRP47872 440 aa9.32□□□□□ -0.92
TRIO-208ENST00000506611 NPAS3Q8IXF0 933 aa9.32□□□□□ -0.92
TRIO-208ENST00000506611 FIGNL2A6NMB9 653 aa9.31□□□□□ -0.92
TRIO-208ENST00000506611 WIPF1O43516 503 aa9.31□□□□□ -0.92
TRIO-208ENST00000506611 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
TRIO-208ENST00000506611 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
TRIO-208ENST00000506611 ABL2P42684 1182 aa9.29□□□□□ -0.92
TRIO-208ENST00000506611 PTGIRP43119 386 aa9.29□□□□□ -0.92
TRIO-208ENST00000506611 VAC14Q08AM6 782 aa9.29□□□□□ -0.92
TRIO-208ENST00000506611 RNF217Q8TC41 542 aa9.29□□□□□ -0.92
TRIO-208ENST00000506611 CCDC85AQ96PX6 553 aaPredicted RBP9.29□□□□□ -0.92
TRIO-208ENST00000506611 CEP126Q9P2H0 1117 aa9.29□□□□□ -0.92
TRIO-208ENST00000506611 PPFIA3O75145 1194 aa9.28□□□□□ -0.92
TRIO-208ENST00000506611 GMPRP36959 345 aa9.28□□□□□ -0.92
TRIO-208ENST00000506611 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
TRIO-208ENST00000506611 TSGA10IPQ3SY00 556 aa9.28□□□□□ -0.92
TRIO-208ENST00000506611 COG6Q9Y2V7 657 aa9.28□□□□□ -0.92
TRIO-208ENST00000506611 PTSQ03393 145 aa9.27□□□□□ -0.93
TRIO-208ENST00000506611 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.27□□□□□ -0.93
TRIO-208ENST00000506611 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
TRIO-208ENST00000506611 POM121Q96HA1 1249 aa9.27□□□□□ -0.93
TRIO-208ENST00000506611 CDCA7Q9BWT1 371 aaPredicted RBP9.27□□□□□ -0.93
TRIO-208ENST00000506611 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
TRIO-208ENST00000506611 PCDHB11Q9Y5F2 797 aa9.27□□□□□ -0.93
TRIO-208ENST00000506611 RNF20Q5VTR2 975 aa9.26□□□□□ -0.93
TRIO-208ENST00000506611 CC2D2BQ6DHV5 1058 aa9.26□□□□□ -0.93
TRIO-208ENST00000506611 PHTF2Q8N3S3 785 aa9.26□□□□□ -0.93
TRIO-208ENST00000506611 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
TRIO-208ENST00000506611 POLMQ9NP87 494 aaPredicted RBP9.26□□□□□ -0.93
TRIO-208ENST00000506611 SENP3-EIF4A1A0A087X0R7 540 aa9.25□□□□□ -0.93
TRIO-208ENST00000506611 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms