RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
CDK7-204ENST00000506563 HOXC9P31274 260 aa17.17■□□□□ 0.34
CDK7-204ENST00000506563 RGPD5Q99666 1765 aa17.17■□□□□ 0.34
CDK7-204ENST00000506563 FLT4P35916 1363 aa17.16■□□□□ 0.34
CDK7-204ENST00000506563 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
CDK7-204ENST00000506563 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
CDK7-204ENST00000506563 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
CDK7-204ENST00000506563 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
CDK7-204ENST00000506563 SMG6Q86US8 1419 aaKnown RBP17.15■□□□□ 0.34
CDK7-204ENST00000506563 IP6K1Q92551 441 aa17.15■□□□□ 0.34
CDK7-204ENST00000506563 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
CDK7-204ENST00000506563 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
CDK7-204ENST00000506563 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
CDK7-204ENST00000506563 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
CDK7-204ENST00000506563 STRN4Q9NRL3 753 aa17.14■□□□□ 0.33
CDK7-204ENST00000506563 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
CDK7-204ENST00000506563 COL18A1P39060 1754 aa17.14■□□□□ 0.33
CDK7-204ENST00000506563 CSB-PGBD3P0DP91 1061 aa17.13■□□□□ 0.33
CDK7-204ENST00000506563 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
CDK7-204ENST00000506563 EVA1CP58658 441 aa17.12■□□□□ 0.33
CDK7-204ENST00000506563 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
CDK7-204ENST00000506563 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
CDK7-204ENST00000506563 LMO7Q8WWI1 1683 aa17.12■□□□□ 0.33
CDK7-204ENST00000506563 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
CDK7-204ENST00000506563 INSRP06213 1382 aa17.11■□□□□ 0.33
CDK7-204ENST00000506563 KIF24Q5T7B8 1368 aa17.11■□□□□ 0.33
CDK7-204ENST00000506563 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
CDK7-204ENST00000506563 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
CDK7-204ENST00000506563 EIF4A2Q14240 407 aaKnown RBP17.1■□□□□ 0.33
CDK7-204ENST00000506563 AFF2P51816 1311 aa17.1■□□□□ 0.33
CDK7-204ENST00000506563 ABCC6O95255 1503 aa17.1■□□□□ 0.33
CDK7-204ENST00000506563 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
CDK7-204ENST00000506563 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
CDK7-204ENST00000506563 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.32
CDK7-204ENST00000506563 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.32
CDK7-204ENST00000506563 USP21Q9UK80 565 aa17.08■□□□□ 0.32
CDK7-204ENST00000506563 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 SLIT2O94813 1529 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 ERBB3P21860 1342 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 LARP1Q6PKG0 1096 aaKnown RBP17.07■□□□□ 0.32
CDK7-204ENST00000506563 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
CDK7-204ENST00000506563 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
CDK7-204ENST00000506563 IL13P35225 146 aa17.06■□□□□ 0.32
CDK7-204ENST00000506563 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
CDK7-204ENST00000506563 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDK7-204ENST00000506563 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
CDK7-204ENST00000506563 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
CDK7-204ENST00000506563 WDR17Q8IZU2 1322 aa17.04■□□□□ 0.32
CDK7-204ENST00000506563 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
CDK7-204ENST00000506563 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
CDK7-204ENST00000506563 BCL9LQ86UU0 1499 aa17.04■□□□□ 0.32
CDK7-204ENST00000506563 HMOX1P09601 288 aa17.03■□□□□ 0.32
CDK7-204ENST00000506563 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
CDK7-204ENST00000506563 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDK7-204ENST00000506563 NBPF6Q5VWK0 638 aa17.03■□□□□ 0.32
CDK7-204ENST00000506563 NBPF4Q96M43 638 aa17.03■□□□□ 0.32
CDK7-204ENST00000506563 EYA1Q99502 592 aa17.03■□□□□ 0.32
CDK7-204ENST00000506563 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
CDK7-204ENST00000506563 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
CDK7-204ENST00000506563 CRB1P82279 1406 aa17.01■□□□□ 0.31
CDK7-204ENST00000506563 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.01■□□□□ 0.31
CDK7-204ENST00000506563 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
CDK7-204ENST00000506563 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
CDK7-204ENST00000506563 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
CDK7-204ENST00000506563 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
CDK7-204ENST00000506563 VPS72Q15906 364 aa16.98■□□□□ 0.31
CDK7-204ENST00000506563 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
CDK7-204ENST00000506563 PNISRQ8TF01 805 aaKnown RBP16.98■□□□□ 0.31
CDK7-204ENST00000506563 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
CDK7-204ENST00000506563 QTRT2Q9H974 415 aaKnown RBP16.98■□□□□ 0.31
CDK7-204ENST00000506563 TRPC5Q9UL62 973 aaPredicted RBP16.98■□□□□ 0.31
CDK7-204ENST00000506563 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
CDK7-204ENST00000506563 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
CDK7-204ENST00000506563 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
CDK7-204ENST00000506563 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
CDK7-204ENST00000506563 ATRNO75882 1429 aa16.96■□□□□ 0.31
CDK7-204ENST00000506563 A0A0G2JS52 829 aa16.96■□□□□ 0.31
CDK7-204ENST00000506563 MYT1Q01538 1121 aa16.96■□□□□ 0.31
CDK7-204ENST00000506563 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
CDK7-204ENST00000506563 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
CDK7-204ENST00000506563 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
CDK7-204ENST00000506563 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
CDK7-204ENST00000506563 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
CDK7-204ENST00000506563 FAM98CQ17RN3 349 aaKnown RBP16.94■□□□□ 0.3
CDK7-204ENST00000506563 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
CDK7-204ENST00000506563 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
CDK7-204ENST00000506563 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
CDK7-204ENST00000506563 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
CDK7-204ENST00000506563 GLI3P10071 1580 aa16.93■□□□□ 0.3
CDK7-204ENST00000506563 MEGF6O75095 1541 aa16.92■□□□□ 0.3
CDK7-204ENST00000506563 WNK3Q9BYP7 1800 aa16.92■□□□□ 0.3
CDK7-204ENST00000506563 IL2RBP14784 551 aa16.92■□□□□ 0.3
CDK7-204ENST00000506563 KDRP35968 1356 aa16.91■□□□□ 0.3
CDK7-204ENST00000506563 NCAPD2Q15021 1401 aa16.91■□□□□ 0.3
CDK7-204ENST00000506563 FCHSD2O94868 740 aa16.91■□□□□ 0.3
CDK7-204ENST00000506563 NEFMP07197 916 aa16.91■□□□□ 0.3
CDK7-204ENST00000506563 MAPK8IP3Q9UPT6 1336 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms