RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 KIF20BQ96Q89 1820 aa18.97■□□□□ 0.63
SERF1B-204ENST00000506542 GGNBP2Q9H3C7 697 aa18.97■□□□□ 0.63
SERF1B-204ENST00000506542 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
SERF1B-204ENST00000506542 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
SERF1B-204ENST00000506542 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
SERF1B-204ENST00000506542 NSD3Q9BZ95 1437 aa18.95■□□□□ 0.62
SERF1B-204ENST00000506542 FAM98CQ17RN3 349 aaKnown RBP18.95■□□□□ 0.62
SERF1B-204ENST00000506542 ARHGEF25Q86VW2 580 aa18.95■□□□□ 0.62
SERF1B-204ENST00000506542 COL5A2P05997 1499 aaPredicted RBP18.94■□□□□ 0.62
SERF1B-204ENST00000506542 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
SERF1B-204ENST00000506542 FYB1O15117 783 aa18.94■□□□□ 0.62
SERF1B-204ENST00000506542 EVA1CP58658 441 aa18.94■□□□□ 0.62
SERF1B-204ENST00000506542 SPATA31A5Q5VU36 1347 aa18.93■□□□□ 0.62
SERF1B-204ENST00000506542 SPATA31A7Q8IWB4 1347 aa18.93■□□□□ 0.62
SERF1B-204ENST00000506542 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
SERF1B-204ENST00000506542 A0A0G2JS52 829 aa18.92■□□□□ 0.62
SERF1B-204ENST00000506542 MYT1Q01538 1121 aa18.92■□□□□ 0.62
SERF1B-204ENST00000506542 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
SERF1B-204ENST00000506542 KCNH5Q8NCM2 988 aa18.92■□□□□ 0.62
SERF1B-204ENST00000506542 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
SERF1B-204ENST00000506542 SPATA31A1Q5TZJ5 1347 aa18.91■□□□□ 0.62
SERF1B-204ENST00000506542 COG3Q96JB2 828 aa18.9■□□□□ 0.62
SERF1B-204ENST00000506542 PANK3Q9H999 370 aa18.9■□□□□ 0.62
SERF1B-204ENST00000506542 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
SERF1B-204ENST00000506542 PER1O15534 1290 aaPredicted RBP18.89■□□□□ 0.61
SERF1B-204ENST00000506542 RRS1Q15050 365 aaKnown RBP18.88■□□□□ 0.61
SERF1B-204ENST00000506542 THSD7AQ9UPZ6 1657 aa18.88■□□□□ 0.61
SERF1B-204ENST00000506542 UPF1Q92900 1129 aaKnown RBP eCLIP18.87■□□□□ 0.61
SERF1B-204ENST00000506542 ONECUT3O60422 494 aaPredicted RBP18.86■□□□□ 0.61
SERF1B-204ENST00000506542 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
SERF1B-204ENST00000506542 PEAK1Q9H792 1746 aa18.85■□□□□ 0.61
SERF1B-204ENST00000506542 RGPD2P0DJD1 1756 aa18.85■□□□□ 0.61
SERF1B-204ENST00000506542 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
SERF1B-204ENST00000506542 CRB1P82279 1406 aa18.85■□□□□ 0.61
SERF1B-204ENST00000506542 CSB-PGBD3P0DP91 1061 aa18.84■□□□□ 0.61
SERF1B-204ENST00000506542 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
SERF1B-204ENST00000506542 WDR17Q8IZU2 1322 aa18.83■□□□□ 0.61
SERF1B-204ENST00000506542 WNK3Q9BYP7 1800 aa18.83■□□□□ 0.6
SERF1B-204ENST00000506542 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
SERF1B-204ENST00000506542 TCP11L2Q8N4U5 519 aa18.82■□□□□ 0.6
SERF1B-204ENST00000506542 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
SERF1B-204ENST00000506542 ANKRD26Q9UPS8 1709 aa18.81■□□□□ 0.6
SERF1B-204ENST00000506542 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
SERF1B-204ENST00000506542 MAP2P11137 1827 aaKnown RBP18.81■□□□□ 0.6
SERF1B-204ENST00000506542 ANKRD24Q8TF21 1146 aa18.81■□□□□ 0.6
SERF1B-204ENST00000506542 ERBB3P21860 1342 aa18.8■□□□□ 0.6
SERF1B-204ENST00000506542 EMILIN1Q9Y6C2 1016 aa18.8■□□□□ 0.6
SERF1B-204ENST00000506542 PARD3Q8TEW0 1356 aa18.8■□□□□ 0.6
SERF1B-204ENST00000506542 HOXC9P31274 260 aa18.79■□□□□ 0.6
SERF1B-204ENST00000506542 AMPHP49418 695 aa18.79■□□□□ 0.6
SERF1B-204ENST00000506542 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
SERF1B-204ENST00000506542 ABCC6O95255 1503 aa18.79■□□□□ 0.6
SERF1B-204ENST00000506542 RALBP1Q15311 655 aa18.79■□□□□ 0.6
SERF1B-204ENST00000506542 IP6K1Q92551 441 aa18.79■□□□□ 0.6
SERF1B-204ENST00000506542 NLRP2Q9NX02 1062 aa18.79■□□□□ 0.6
SERF1B-204ENST00000506542 LRRC37A3O60309 1634 aa18.78■□□□□ 0.6
SERF1B-204ENST00000506542 BARGINQ6ZT62 677 aa18.78■□□□□ 0.6
SERF1B-204ENST00000506542 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
SERF1B-204ENST00000506542 KNSTRNQ9Y448 316 aa18.78■□□□□ 0.6
SERF1B-204ENST00000506542 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
SERF1B-204ENST00000506542 PARP4Q9UKK3 1724 aaKnown RBP18.77■□□□□ 0.6
SERF1B-204ENST00000506542 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
SERF1B-204ENST00000506542 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
SERF1B-204ENST00000506542 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
SERF1B-204ENST00000506542 CARD10Q9BWT7 1032 aa18.76■□□□□ 0.59
SERF1B-204ENST00000506542 BLMP54132 1417 aaPredicted RBP18.75■□□□□ 0.59
SERF1B-204ENST00000506542 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
SERF1B-204ENST00000506542 THRAP3Q9Y2W1 955 aaKnown RBP18.74■□□□□ 0.59
SERF1B-204ENST00000506542 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
SERF1B-204ENST00000506542 CC2D1BQ5T0F9 858 aaKnown RBP18.73■□□□□ 0.59
SERF1B-204ENST00000506542 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
SERF1B-204ENST00000506542 DISP2A7MBM2 1401 aa18.72■□□□□ 0.59
SERF1B-204ENST00000506542 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
SERF1B-204ENST00000506542 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
SERF1B-204ENST00000506542 PDE3BQ13370 1112 aa18.71■□□□□ 0.59
SERF1B-204ENST00000506542 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
SERF1B-204ENST00000506542 RTL1A6NKG5 1358 aa18.7■□□□□ 0.58
SERF1B-204ENST00000506542 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
SERF1B-204ENST00000506542 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
SERF1B-204ENST00000506542 FLT4P35916 1363 aa18.7■□□□□ 0.58
SERF1B-204ENST00000506542 DDB1Q16531 1140 aa18.69■□□□□ 0.58
SERF1B-204ENST00000506542 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
SERF1B-204ENST00000506542 MORC1Q86VD1 984 aa18.69■□□□□ 0.58
SERF1B-204ENST00000506542 MARCH10Q8NA82 808 aaPredicted RBP18.68■□□□□ 0.58
SERF1B-204ENST00000506542 TNS1Q9HBL0 1735 aaKnown RBP18.68■□□□□ 0.58
SERF1B-204ENST00000506542 INSRP06213 1382 aa18.68■□□□□ 0.58
SERF1B-204ENST00000506542 TRIM37O94972 964 aa18.67■□□□□ 0.58
SERF1B-204ENST00000506542 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
SERF1B-204ENST00000506542 PTF1AQ7RTS3 328 aa18.67■□□□□ 0.58
SERF1B-204ENST00000506542 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
SERF1B-204ENST00000506542 MEGF6O75095 1541 aa18.66■□□□□ 0.58
SERF1B-204ENST00000506542 SRCAPQ6ZRS2 3230 aa18.66■□□□□ 0.58
SERF1B-204ENST00000506542 IL2RBP14784 551 aa18.66■□□□□ 0.58
SERF1B-204ENST00000506542 NSD2O96028 1365 aa18.66■□□□□ 0.58
SERF1B-204ENST00000506542 RGPD1P0DJD0 1748 aa18.65■□□□□ 0.58
SERF1B-204ENST00000506542 SHANK3Q9BYB0 1731 aa18.64■□□□□ 0.57
SERF1B-204ENST00000506542 TNS2Q63HR2 1409 aa18.63■□□□□ 0.57
SERF1B-204ENST00000506542 KAT6BQ8WYB5 2073 aa18.63■□□□□ 0.57
SERF1B-204ENST00000506542 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
SERF1B-204ENST00000506542 EXOC5O00471 708 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms