RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 WNT7BP56706 349 aa10.93□□□□□ -0.66
HERC4-213ENST00000506515 C1QTNF2Q9BXJ5 285 aa10.93□□□□□ -0.66
HERC4-213ENST00000506515 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
HERC4-213ENST00000506515 NCOA4Q13772 614 aa10.92□□□□□ -0.66
HERC4-213ENST00000506515 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
HERC4-213ENST00000506515 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
HERC4-213ENST00000506515 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
HERC4-213ENST00000506515 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
HERC4-213ENST00000506515 LIAT1Q6ZQX7 453 aa10.91□□□□□ -0.66
HERC4-213ENST00000506515 EHBP1Q8NDI1 1231 aa10.91□□□□□ -0.66
HERC4-213ENST00000506515 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
HERC4-213ENST00000506515 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
HERC4-213ENST00000506515 CSB-PGBD3P0DP91 1061 aa10.89□□□□□ -0.67
HERC4-213ENST00000506515 RAB15P59190 212 aa10.89□□□□□ -0.67
HERC4-213ENST00000506515 CCDC85AQ96PX6 553 aaPredicted RBP10.89□□□□□ -0.67
HERC4-213ENST00000506515 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
HERC4-213ENST00000506515 DOLKQ9UPQ8 538 aa10.89□□□□□ -0.67
HERC4-213ENST00000506515 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
HERC4-213ENST00000506515 MAP7D1Q3KQU3 841 aa10.88□□□□□ -0.67
HERC4-213ENST00000506515 RC3H1Q5TC82 1133 aaKnown RBP10.88□□□□□ -0.67
HERC4-213ENST00000506515 RNF20Q5VTR2 975 aa10.88□□□□□ -0.67
HERC4-213ENST00000506515 EMID1Q96A84 441 aaPredicted RBP10.88□□□□□ -0.67
HERC4-213ENST00000506515 CDV3Q9UKY7 258 aaKnown RBP10.88□□□□□ -0.67
HERC4-213ENST00000506515 ATG7O95352 703 aa10.87□□□□□ -0.67
HERC4-213ENST00000506515 EML3Q32P44 896 aa10.87□□□□□ -0.67
HERC4-213ENST00000506515 OXLD1Q5BKU9 147 aa10.87□□□□□ -0.67
HERC4-213ENST00000506515 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
HERC4-213ENST00000506515 TRAF7Q6Q0C0 670 aa10.87□□□□□ -0.67
HERC4-213ENST00000506515 VASH1Q7L8A9 365 aaPredicted RBP10.87□□□□□ -0.67
HERC4-213ENST00000506515 KCTD15Q96SI1 283 aaPredicted RBP10.87□□□□□ -0.67
HERC4-213ENST00000506515 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
HERC4-213ENST00000506515 SLC19A1P41440 591 aa10.86□□□□□ -0.67
HERC4-213ENST00000506515 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
HERC4-213ENST00000506515 PLA2G2EQ9NZK7 142 aa10.86□□□□□ -0.67
HERC4-213ENST00000506515 CARNS1A5YM72 827 aa10.85□□□□□ -0.67
HERC4-213ENST00000506515 ESPNB1AK53 854 aa10.85□□□□□ -0.67
HERC4-213ENST00000506515 LZTS3O60299 673 aaPredicted RBP10.85□□□□□ -0.67
HERC4-213ENST00000506515 PCDHB11Q9Y5F2 797 aa10.85□□□□□ -0.67
HERC4-213ENST00000506515 RASA1P20936 1047 aa10.84□□□□□ -0.67
HERC4-213ENST00000506515 CDCA7Q9BWT1 371 aaPredicted RBP10.84□□□□□ -0.67
HERC4-213ENST00000506515 ATP5J2-PTCD1G3V325 749 aa10.83□□□□□ -0.68
HERC4-213ENST00000506515 PDE4CQ08493 712 aa10.83□□□□□ -0.68
HERC4-213ENST00000506515 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
HERC4-213ENST00000506515 CRTC2Q53ET0 693 aaPredicted RBP10.83□□□□□ -0.68
HERC4-213ENST00000506515 LARP1Q6PKG0 1096 aaKnown RBP10.83□□□□□ -0.68
HERC4-213ENST00000506515 SEPT12Q8IYM1 358 aa10.83□□□□□ -0.68
HERC4-213ENST00000506515 NOD1Q9Y239 953 aa10.83□□□□□ -0.68
HERC4-213ENST00000506515 TLL2Q9Y6L7 1015 aa10.83□□□□□ -0.68
HERC4-213ENST00000506515 MAP4K5Q9Y4K4 846 aa10.82□□□□□ -0.68
HERC4-213ENST00000506515 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L21D6R901 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
HERC4-213ENST00000506515 NOVA2Q9UNW9 492 aaKnown RBP10.81□□□□□ -0.68
HERC4-213ENST00000506515 USTQ9Y2C2 406 aa10.81□□□□□ -0.68
HERC4-213ENST00000506515 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 FSHRP23945 695 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 SPRYD7Q5W111 196 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 TRIM50Q86XT4 487 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 AEBP1Q8IUX7 1158 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 OGFOD1Q8N543 542 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 MRGPRX2Q96LB1 330 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 ZMIZ1Q9ULJ6 1067 aa10.8□□□□□ -0.68
HERC4-213ENST00000506515 A0A0G2JS52 829 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 SIAH2O43255 324 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 CLDN10P78369 228 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 PTK7Q13308 1070 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 ELOAQ14241 798 aaKnown RBP10.79□□□□□ -0.68
HERC4-213ENST00000506515 STK32AQ8WU08 396 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
HERC4-213ENST00000506515 CDK15Q96Q40 435 aa10.79□□□□□ -0.68
HERC4-213ENST00000506515 WNT7AO00755 349 aa10.78□□□□□ -0.68
HERC4-213ENST00000506515 GRM5P41594 1212 aa10.78□□□□□ -0.68
HERC4-213ENST00000506515 ATP1A2P50993 1020 aa10.78□□□□□ -0.68
HERC4-213ENST00000506515 USP4Q13107 963 aa10.78□□□□□ -0.68
HERC4-213ENST00000506515 ZNF697Q5TEC3 545 aa10.78□□□□□ -0.68
HERC4-213ENST00000506515 CCDC125Q86Z20 511 aa10.78□□□□□ -0.68
HERC4-213ENST00000506515 DNAAF2Q9NVR5 837 aaKnown RBP10.78□□□□□ -0.68
HERC4-213ENST00000506515 TMEM88BA6NKF7 163 aa10.77□□□□□ -0.69
HERC4-213ENST00000506515 GTF2IP78347 998 aa10.77□□□□□ -0.69
HERC4-213ENST00000506515 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.69
HERC4-213ENST00000506515 SIRT1Q96EB6 747 aa10.77□□□□□ -0.69
HERC4-213ENST00000506515 PSME1Q06323 249 aa10.76□□□□□ -0.69
HERC4-213ENST00000506515 FOXC1Q12948 553 aa10.76□□□□□ -0.69
HERC4-213ENST00000506515 FAM200AQ8TCP9 573 aa10.76□□□□□ -0.69
HERC4-213ENST00000506515 PRKD2Q9BZL6 878 aa10.76□□□□□ -0.69
HERC4-213ENST00000506515 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 ADH1CP00326 375 aa10.75□□□□□ -0.69
HERC4-213ENST00000506515 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
HERC4-213ENST00000506515 SCTRP47872 440 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms