RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
TRIM23-205ENST00000506400 LRP6O75581 1613 aa15.09■□□□□ 0.01
TRIM23-205ENST00000506400 CHRNA2Q15822 529 aa15.08■□□□□ 0
TRIM23-205ENST00000506400 BLMP54132 1417 aaPredicted RBP15.08■□□□□ 0
TRIM23-205ENST00000506400 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
TRIM23-205ENST00000506400 INSRP06213 1382 aa15.07■□□□□ 0
TRIM23-205ENST00000506400 COL14A1Q05707 1796 aaKnown RBP15.06■□□□□ 0
TRIM23-205ENST00000506400 NGLY1Q96IV0 654 aa15.06■□□□□ 0
TRIM23-205ENST00000506400 C8orf37Q96NL8 207 aa15.06■□□□□ 0
TRIM23-205ENST00000506400 HSP90AB2PQ58FF8 381 aa15.05■□□□□ -0
TRIM23-205ENST00000506400 AXIN2Q9Y2T1 843 aa15.05■□□□□ -0
TRIM23-205ENST00000506400 LTN1O94822 1766 aa15.05■□□□□ -0
TRIM23-205ENST00000506400 LMO7Q8WWI1 1683 aa15.04■□□□□ -0
TRIM23-205ENST00000506400 ADRA2BP18089 450 aa15.04■□□□□ -0
TRIM23-205ENST00000506400 EVA1CP58658 441 aa15.04■□□□□ -0
TRIM23-205ENST00000506400 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
TRIM23-205ENST00000506400 BTG4Q9NY30 223 aa15.04■□□□□ -0
TRIM23-205ENST00000506400 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
TRIM23-205ENST00000506400 COL18A1P39060 1754 aa15.03■□□□□ -0
TRIM23-205ENST00000506400 PEAK1Q9H792 1746 aa15.03■□□□□ -0
TRIM23-205ENST00000506400 SLIT2O94813 1529 aa15.03■□□□□ -0
TRIM23-205ENST00000506400 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
TRIM23-205ENST00000506400 MIER1Q8N108 512 aa15.03■□□□□ -0
TRIM23-205ENST00000506400 ANKRD24Q8TF21 1146 aa15.03■□□□□ -0
TRIM23-205ENST00000506400 CAMTA1Q9Y6Y1 1673 aa15.03■□□□□ -0
TRIM23-205ENST00000506400 CCER2I3L3R5 266 aa15.02■□□□□ -0
TRIM23-205ENST00000506400 NUDCQ9Y266 331 aa15.02■□□□□ -0
TRIM23-205ENST00000506400 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
TRIM23-205ENST00000506400 ERBB3P21860 1342 aa15.01□□□□□ -0.01
TRIM23-205ENST00000506400 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
TRIM23-205ENST00000506400 EIF4A2Q14240 407 aaKnown RBP15.01□□□□□ -0.01
TRIM23-205ENST00000506400 LTV1Q96GA3 475 aaPredicted RBP15.01□□□□□ -0.01
TRIM23-205ENST00000506400 AFF2P51816 1311 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 WDR17Q8IZU2 1322 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 IL13P35225 146 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 UNC5CLQ8IV45 518 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 STRN4Q9NRL3 753 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 USP21Q9UK80 565 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 COL3A1P02461 1466 aaPredicted RBP15□□□□□ -0.01
TRIM23-205ENST00000506400 NWD2Q9ULI1 1742 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
TRIM23-205ENST00000506400 MRS2Q9HD23 443 aa14.99□□□□□ -0.01
TRIM23-205ENST00000506400 BCL9LQ86UU0 1499 aa14.98□□□□□ -0.01
TRIM23-205ENST00000506400 ZNF772Q68DY9 489 aaPredicted RBP14.97□□□□□ -0.01
TRIM23-205ENST00000506400 TOM1L2Q6ZVM7 507 aa14.97□□□□□ -0.01
TRIM23-205ENST00000506400 CARD10Q9BWT7 1032 aa14.97□□□□□ -0.01
TRIM23-205ENST00000506400 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
TRIM23-205ENST00000506400 CRB1P82279 1406 aa14.97□□□□□ -0.01
TRIM23-205ENST00000506400 U2SURPO15042 1029 aaKnown RBP14.96□□□□□ -0.01
TRIM23-205ENST00000506400 WDR43Q15061 677 aaKnown RBP eCLIP14.96□□□□□ -0.01
TRIM23-205ENST00000506400 VPS72Q15906 364 aa14.96□□□□□ -0.01
TRIM23-205ENST00000506400 CCDC184Q52MB2 194 aa14.96□□□□□ -0.01
TRIM23-205ENST00000506400 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
TRIM23-205ENST00000506400 NRAPQ86VF7 1730 aa14.96□□□□□ -0.01
TRIM23-205ENST00000506400 EYA1Q99502 592 aa14.96□□□□□ -0.01
TRIM23-205ENST00000506400 TRPC5Q9UL62 973 aaPredicted RBP14.96□□□□□ -0.01
TRIM23-205ENST00000506400 IGSF1Q8N6C5 1336 aa14.95□□□□□ -0.02
TRIM23-205ENST00000506400 NBPF6Q5VWK0 638 aa14.95□□□□□ -0.02
TRIM23-205ENST00000506400 NBPF4Q96M43 638 aa14.95□□□□□ -0.02
TRIM23-205ENST00000506400 FAM208AQ9UK61 1670 aaKnown RBP14.95□□□□□ -0.02
TRIM23-205ENST00000506400 RGPD5Q99666 1765 aa14.94□□□□□ -0.02
TRIM23-205ENST00000506400 U2AF1L5P0DN76 240 aaPredicted RBP14.94□□□□□ -0.02
TRIM23-205ENST00000506400 U2AF1Q01081 240 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIM23-205ENST00000506400 THRAP3Q9Y2W1 955 aaKnown RBP14.94□□□□□ -0.02
TRIM23-205ENST00000506400 CCDC9Q9Y3X0 531 aaKnown RBP14.94□□□□□ -0.02
TRIM23-205ENST00000506400 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.94□□□□□ -0.02
TRIM23-205ENST00000506400 ATRNO75882 1429 aa14.93□□□□□ -0.02
TRIM23-205ENST00000506400 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
TRIM23-205ENST00000506400 SPATA31A1Q5TZJ5 1347 aa14.92□□□□□ -0.02
TRIM23-205ENST00000506400 SPATA31A5Q5VU36 1347 aa14.92□□□□□ -0.02
TRIM23-205ENST00000506400 SPATA31A7Q8IWB4 1347 aa14.92□□□□□ -0.02
TRIM23-205ENST00000506400 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
TRIM23-205ENST00000506400 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
TRIM23-205ENST00000506400 PNISRQ8TF01 805 aaKnown RBP14.92□□□□□ -0.02
TRIM23-205ENST00000506400 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
TRIM23-205ENST00000506400 FCHSD2O94868 740 aa14.91□□□□□ -0.02
TRIM23-205ENST00000506400 TCP11L2Q8N4U5 519 aa14.91□□□□□ -0.02
TRIM23-205ENST00000506400 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
TRIM23-205ENST00000506400 GJD4Q96KN9 370 aaPredicted RBP14.91□□□□□ -0.02
TRIM23-205ENST00000506400 KDRP35968 1356 aa14.9□□□□□ -0.02
TRIM23-205ENST00000506400 RGPD1P0DJD0 1748 aa14.9□□□□□ -0.02
TRIM23-205ENST00000506400 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
TRIM23-205ENST00000506400 USP35Q9P2H5 1018 aa14.9□□□□□ -0.02
TRIM23-205ENST00000506400 HMOX1P09601 288 aa14.89□□□□□ -0.03
TRIM23-205ENST00000506400 BARGINQ6ZT62 677 aa14.89□□□□□ -0.03
TRIM23-205ENST00000506400 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
TRIM23-205ENST00000506400 ADAMTS8Q9UP79 889 aa14.89□□□□□ -0.03
TRIM23-205ENST00000506400 PLEKHG2Q9H7P9 1386 aa14.88□□□□□ -0.03
TRIM23-205ENST00000506400 NEFMP07197 916 aa14.88□□□□□ -0.03
TRIM23-205ENST00000506400 IL2RBP14784 551 aa14.88□□□□□ -0.03
TRIM23-205ENST00000506400 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
TRIM23-205ENST00000506400 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
TRIM23-205ENST00000506400 RSPH6AQ9H0K4 717 aa14.88□□□□□ -0.03
TRIM23-205ENST00000506400 RBM6P78332 1123 aaKnown RBP14.87□□□□□ -0.03
TRIM23-205ENST00000506400 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
TRIM23-205ENST00000506400 RGS17Q9UGC6 210 aaPredicted RBP14.87□□□□□ -0.03
TRIM23-205ENST00000506400 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
TRIM23-205ENST00000506400 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
TRIM23-205ENST00000506400 DISP2A7MBM2 1401 aa14.85□□□□□ -0.03
TRIM23-205ENST00000506400 ONECUT3O60422 494 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms