RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 CCDC144CPQ8IYA2 1237 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 PANK2Q9BZ23 570 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 UPF3BQ9BZI7 483 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 UBA5Q9GZZ9 404 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 SLC12A5Q9H2X9 1139 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 BAZ2BQ9UIF8 2168 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 ADAMTS2O95450 1211 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 PRKAR2BP31323 418 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 EXOSC9Q06265 439 aaKnown RBP3.03□□□□□ -1.92
ITGA1-204ENST00000506275 MPHOSPH8Q99549 860 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 GDPD2Q9HCC8 539 aa3.03□□□□□ -1.92
ITGA1-204ENST00000506275 AEBP1Q8IUX7 1158 aa3.03□□□□□ -1.93
ITGA1-204ENST00000506275 BCCIPQ9P287 314 aaKnown RBP eCLIP3.03□□□□□ -1.93
ITGA1-204ENST00000506275 ARHGAP35Q9NRY4 1499 aa3.03□□□□□ -1.93
ITGA1-204ENST00000506275 FAM69CQ0P6D2 419 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 SPTY2D1Q68D10 685 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 JPH4Q96JJ6 628 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 NOB1Q9ULX3 412 aaKnown RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 EXOC6BQ9Y2D4 811 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 HDGFL1Q5TGJ6 251 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 WWC2Q6AWC2 1192 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TCP11L2Q8N4U5 519 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 BRMS1Q9HCU9 246 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TRMT1Q9NXH9 659 aaKnown RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 MAGEC2Q9UBF1 373 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 ERC2O15083 957 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 RDXP35241 583 aaKnown RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 SKOR2Q2VWA4 1001 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TTC39AQ5SRH9 613 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 CNTROBQ8N137 903 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 IPO4Q8TEX9 1081 aaKnown RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 CPLX3Q8WVH0 158 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 RNF216Q9NWF9 866 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 SMARCA5O60264 1052 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 XBP1P17861 261 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 CA8P35219 290 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 USHBP1Q8N6Y0 703 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 ZSWIM4Q9H7M6 989 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TBC1D2BQ9UPU7 963 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 VGFO15240 615 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 DTNBO60941 627 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TDO2P48775 406 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 CFAP70Q5T0N1 1121 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TSHZ3Q63HK5 1081 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 VAT1LQ9HCJ6 419 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 FHOD3Q2V2M9 1422 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 USP47Q96K76 1375 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 TNIKQ9UKE5 1360 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 UBE4AQ14139 1066 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 ARGLU1Q9NWB6 273 aaPredicted RBP3.02□□□□□ -1.93
ITGA1-204ENST00000506275 LRP2BPQ9P2M1 347 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 PDZRN3Q9UPQ7 1066 aa3.02□□□□□ -1.93
ITGA1-204ENST00000506275 POLR3GO15318 223 aaPredicted RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 ZNF76P36508 570 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 NUCB2P80303 420 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 TTLL12Q14166 644 aaPredicted RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 SART3Q15020 963 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 LARP1BQ659C4 914 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 NUTM1Q86Y26 1132 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CCDC102AQ96A19 550 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 MMRN2Q9H8L6 949 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 ANKRD30AQ9BXX3 1397 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 KIF15Q9NS87 1388 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 SPDYE4A6NLX3 237 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 FBLN1P23142 703 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CBX1P83916 185 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 SF3B2Q13435 895 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 FILIP1LQ4L180 1135 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 KIF6Q6ZMV9 814 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CTNNBL1Q8WYA6 563 aaPredicted RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 TNMDQ9H2S6 317 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CECR2Q9BXF3 1484 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CEP164Q9UPV0 1460 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CFAP65Q6ZU64 1925 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 EIF3AQ14152 1382 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CCDC144AA2RUR9 1427 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 BIN1O00499 593 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 SRGAP3O43295 1099 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 NEBLO76041 1014 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 ATXN8OSP0DMR3 200 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 HMGN5P82970 282 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 NBPF1Q3BBV0 1214 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CCDC184Q52MB2 194 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 RUNDC1Q96C34 613 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 BOLA2Q9H3K6 86 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 GOPCQ9HD26 462 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 ANKRD12Q6UB98 2062 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CABP4P57796 275 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CCDC57Q2TAC2 916 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 MPRIPQ6WCQ1 1025 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 TICAM2Q86XR7 235 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 AFAP1Q8N556 730 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 SCLT1Q96NL6 688 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 API5Q9BZZ5 524 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 NAT10Q9H0A0 1025 aaKnown RBP3.01□□□□□ -1.93
ITGA1-204ENST00000506275 RAI14Q9P0K7 980 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 GPTP24298 496 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 TXLNAP40222 546 aa3.01□□□□□ -1.93
ITGA1-204ENST00000506275 CCT2P78371 535 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms