RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
CHD1-204ENST00000505982 SH3BP5LQ7L8J4 393 aa11.57□□□□□ -0.56
CHD1-204ENST00000505982 GPKOWQ92917 476 aaPredicted RBP eCLIP11.57□□□□□ -0.56
CHD1-204ENST00000505982 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
CHD1-204ENST00000505982 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
CHD1-204ENST00000505982 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
CHD1-204ENST00000505982 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
CHD1-204ENST00000505982 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
CHD1-204ENST00000505982 ARXQ96QS3 562 aa11.55□□□□□ -0.56
CHD1-204ENST00000505982 DNMT3LQ9UJW3 386 aa11.54□□□□□ -0.56
CHD1-204ENST00000505982 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
CHD1-204ENST00000505982 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.52□□□□□ -0.57
CHD1-204ENST00000505982 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
CHD1-204ENST00000505982 TTLL8A6PVC2 850 aa11.5□□□□□ -0.57
CHD1-204ENST00000505982 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
CHD1-204ENST00000505982 PCMTD1Q96MG8 357 aaPredicted RBP11.5□□□□□ -0.57
CHD1-204ENST00000505982 POLR3EQ9NVU0 708 aa11.5□□□□□ -0.57
CHD1-204ENST00000505982 PDXDC2PQ6P474 469 aa11.49□□□□□ -0.57
CHD1-204ENST00000505982 ZMYND15Q9H091 742 aa11.49□□□□□ -0.57
CHD1-204ENST00000505982 GOPCQ9HD26 462 aa11.49□□□□□ -0.57
CHD1-204ENST00000505982 ATP1B4Q9UN42 357 aaPredicted RBP11.49□□□□□ -0.57
CHD1-204ENST00000505982 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
CHD1-204ENST00000505982 PPP1R26Q5T8A7 1209 aaPredicted RBP11.48□□□□□ -0.57
CHD1-204ENST00000505982 CDV3Q9UKY7 258 aaKnown RBP11.48□□□□□ -0.57
CHD1-204ENST00000505982 ARHGAP9Q9BRR9 750 aa11.47□□□□□ -0.57
CHD1-204ENST00000505982 PTSQ03393 145 aa11.45□□□□□ -0.58
CHD1-204ENST00000505982 Q6ZVU0 165 aa11.45□□□□□ -0.58
CHD1-204ENST00000505982 SLC10A4Q96EP9 437 aa11.45□□□□□ -0.58
CHD1-204ENST00000505982 FIGNL2A6NMB9 653 aa11.44□□□□□ -0.58
CHD1-204ENST00000505982 DHX9Q08211 1270 aaKnown RBP11.44□□□□□ -0.58
CHD1-204ENST00000505982 CBLBQ13191 982 aa11.44□□□□□ -0.58
CHD1-204ENST00000505982 ZBTB33Q86T24 672 aa11.44□□□□□ -0.58
CHD1-204ENST00000505982 HOMEZQ8IX15 550 aa11.44□□□□□ -0.58
CHD1-204ENST00000505982 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
CHD1-204ENST00000505982 FKBPLQ9UIM3 349 aa11.44□□□□□ -0.58
CHD1-204ENST00000505982 SPINT1O43278 529 aa11.43□□□□□ -0.58
CHD1-204ENST00000505982 KCNMA1Q12791 1236 aa11.43□□□□□ -0.58
CHD1-204ENST00000505982 FLIIQ13045 1269 aa11.43□□□□□ -0.58
CHD1-204ENST00000505982 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
CHD1-204ENST00000505982 GPR161Q8N6U8 529 aaKnown RBP11.42□□□□□ -0.58
CHD1-204ENST00000505982 CNTNAP3BQ96NU0 1288 aa11.42□□□□□ -0.58
CHD1-204ENST00000505982 CNTNAP3Q9BZ76 1288 aa11.42□□□□□ -0.58
CHD1-204ENST00000505982 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
CHD1-204ENST00000505982 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
CHD1-204ENST00000505982 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
CHD1-204ENST00000505982 CCDC155Q8N6L0 562 aa11.4□□□□□ -0.58
CHD1-204ENST00000505982 KRT76Q01546 638 aa11.39□□□□□ -0.59
CHD1-204ENST00000505982 PTK2Q05397 1052 aa11.39□□□□□ -0.59
CHD1-204ENST00000505982 NR6A1Q15406 480 aa11.38□□□□□ -0.59
CHD1-204ENST00000505982 SKIV2LQ15477 1246 aaKnown RBP11.38□□□□□ -0.59
CHD1-204ENST00000505982 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
CHD1-204ENST00000505982 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
CHD1-204ENST00000505982 INTS6LQ5JSJ4 861 aaKnown RBP11.36□□□□□ -0.59
CHD1-204ENST00000505982 GPSM3Q9Y4H4 160 aa11.36□□□□□ -0.59
CHD1-204ENST00000505982 RNF225M0QZC1 329 aaPredicted RBP11.35□□□□□ -0.59
CHD1-204ENST00000505982 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
CHD1-204ENST00000505982 RELBQ01201 579 aa11.34□□□□□ -0.59
CHD1-204ENST00000505982 TMEM151AQ8N4L1 468 aa11.34□□□□□ -0.59
CHD1-204ENST00000505982 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
CHD1-204ENST00000505982 ITGA6P23229 1130 aa11.33□□□□□ -0.6
CHD1-204ENST00000505982 CTSOP43234 321 aaPredicted RBP11.33□□□□□ -0.6
CHD1-204ENST00000505982 GSK3AP49840 483 aa11.33□□□□□ -0.6
CHD1-204ENST00000505982 NBPF20Q3BBV1 942 aa11.33□□□□□ -0.6
CHD1-204ENST00000505982 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
CHD1-204ENST00000505982 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
CHD1-204ENST00000505982 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
CHD1-204ENST00000505982 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
CHD1-204ENST00000505982 SV2AQ7L0J3 742 aa11.32□□□□□ -0.6
CHD1-204ENST00000505982 VWA5B2Q8N398 1253 aa11.32□□□□□ -0.6
CHD1-204ENST00000505982 ADAM32Q8TC27 787 aa11.32□□□□□ -0.6
CHD1-204ENST00000505982 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
CHD1-204ENST00000505982 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHD1-204ENST00000505982 CDC14CA4D256 554 aa11.31□□□□□ -0.6
CHD1-204ENST00000505982 RASSF7Q02833 373 aa11.31□□□□□ -0.6
CHD1-204ENST00000505982 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
CHD1-204ENST00000505982 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
CHD1-204ENST00000505982 AP1G2O75843 785 aa11.3□□□□□ -0.6
CHD1-204ENST00000505982 GDF11O95390 407 aa11.3□□□□□ -0.6
CHD1-204ENST00000505982 UBTFP17480 764 aaKnown RBP11.3□□□□□ -0.6
CHD1-204ENST00000505982 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
CHD1-204ENST00000505982 SVOPQ8N4V2 548 aa11.3□□□□□ -0.6
CHD1-204ENST00000505982 ZNF395Q9H8N7 513 aaPredicted RBP11.3□□□□□ -0.6
CHD1-204ENST00000505982 ZNF385CQ66K41 422 aaPredicted RBP11.29□□□□□ -0.6
CHD1-204ENST00000505982 FBXO31Q5XUX0 539 aaPredicted RBP11.28□□□□□ -0.6
CHD1-204ENST00000505982 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
CHD1-204ENST00000505982 RNF217Q8TC41 542 aa11.28□□□□□ -0.6
CHD1-204ENST00000505982 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
CHD1-204ENST00000505982 SLURP2P0DP57 97 aa11.27□□□□□ -0.61
CHD1-204ENST00000505982 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
CHD1-204ENST00000505982 LOC100996750A0A140TA64 210 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 ADH1AP07327 375 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 RAB15P59190 212 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 MCM6Q14566 821 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
CHD1-204ENST00000505982 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 ARID3AQ99856 593 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 KRTAP4-6Q9BYQ5 205 aa11.26□□□□□ -0.61
CHD1-204ENST00000505982 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
CHD1-204ENST00000505982 ERVH48-1M5A8F1 160 aa11.24□□□□□ -0.61
CHD1-204ENST00000505982 PTGIRP43119 386 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms