RNA–Protein interactions for RNA: ENST00000505972.2

CTD-3080P12.3-201, humanhuman

TSL 3

Gene CTD-3080P12.3, Length 697 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-3080P12.3-201ENST00000505972 KIAA0232Q92628 1395 aa16.64■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 FAM9BQ8IZU0 186 aa16.63■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 NUTM2BA6NNL0 878 aaPredicted RBP16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 NUTM2EB1AL46 878 aaPredicted RBP16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 IL13P35225 146 aa16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 FBXO41Q8TF61 875 aa16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 BLMP54132 1417 aaPredicted RBP16.61■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 ABCC6O95255 1503 aa16.6■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 U2SURPO15042 1029 aaKnown RBP16.6■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 SPATA31A6Q5VVP1 1343 aa16.6■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 COL18A1P39060 1754 aa16.59■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 RGPD5Q99666 1765 aa16.59■□□□□ 0.25
CTD-3080P12.3-201ENST00000505972 FAM83GA6ND36 823 aa16.58■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 LMO7Q8WWI1 1683 aa16.54■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 ERBB3P21860 1342 aa16.53■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 EVA1CP58658 441 aa16.53■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 EYA1Q99502 592 aa16.53■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 BTG4Q9NY30 223 aa16.53■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 FCHSD2O94868 740 aa16.52■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.24
CTD-3080P12.3-201ENST00000505972 IGSF1Q8N6C5 1336 aa16.51■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 HMOX1P09601 288 aa16.51■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 NBPF6Q5VWK0 638 aa16.51■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 NBPF4Q96M43 638 aa16.51■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 NGLY1Q96IV0 654 aa16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 PLCH1Q4KWH8 1693 aa16.5■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 WDR17Q8IZU2 1322 aa16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 LRP6O75581 1613 aa16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 NEFMP07197 916 aa16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 YTHDC1Q96MU7 727 aaKnown RBP16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 PRKAR2BP31323 418 aa16.48■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 TOM1L2Q6ZVM7 507 aa16.48■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 MAPK8IP3Q9UPT6 1336 aa16.47■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 KDRP35968 1356 aa16.47■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 LARP1Q6PKG0 1096 aaKnown RBP16.46■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
CTD-3080P12.3-201ENST00000505972 SLIT2O94813 1529 aa16.45■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 CARD10Q9BWT7 1032 aa16.45■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 APAF1O14727 1248 aa16.44■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 UNC5CLQ8IV45 518 aa16.44■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 CRB1P82279 1406 aa16.44■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 TCP11L2Q8N4U5 519 aa16.43■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 RAPGEF4Q8WZA2 1011 aa16.42■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 USP21Q9UK80 565 aa16.42■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 AFF2P51816 1311 aa16.41■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 TATP17735 454 aaPredicted RBP16.4■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 BCL9LQ86UU0 1499 aa16.4■□□□□ 0.22
CTD-3080P12.3-201ENST00000505972 TMPOP42166 694 aaKnown RBP16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 VPS72Q15906 364 aa16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 NFE2L2Q16236 605 aa16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 IL2RBP14784 551 aa16.38■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 NEUROD2Q15784 382 aa16.38■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 SPATA31A1Q5TZJ5 1347 aa16.38■□□□□ 0.21
CTD-3080P12.3-201ENST00000505972 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms