RNA–Protein interactions for RNA: ENST00000505690.1

SPOCK1-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 2

Gene SPOCK1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-204ENST00000505690 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
SPOCK1-204ENST00000505690 MORC1Q86VD1 984 aa31.29■■■□□ 2.6
SPOCK1-204ENST00000505690 RRS1Q15050 365 aaKnown RBP31.28■■■□□ 2.6
SPOCK1-204ENST00000505690 AXIN2Q9Y2T1 843 aa31.28■■■□□ 2.6
SPOCK1-204ENST00000505690 VPS72Q15906 364 aa31.27■■■□□ 2.6
SPOCK1-204ENST00000505690 CC2D1BQ5T0F9 858 aaKnown RBP31.27■■■□□ 2.6
SPOCK1-204ENST00000505690 STRN4Q9NRL3 753 aa31.27■■■□□ 2.6
SPOCK1-204ENST00000505690 COL5A2P05997 1499 aaPredicted RBP31.27■■■□□ 2.6
SPOCK1-204ENST00000505690 TNNT2P45379 298 aaPredicted RBP31.26■■■□□ 2.59
SPOCK1-204ENST00000505690 EVA1CP58658 441 aa31.26■■■□□ 2.59
SPOCK1-204ENST00000505690 RGPD5Q99666 1765 aa31.25■■■□□ 2.59
SPOCK1-204ENST00000505690 AMPHP49418 695 aa31.24■■■□□ 2.59
SPOCK1-204ENST00000505690 IP6K1Q92551 441 aa31.24■■■□□ 2.59
SPOCK1-204ENST00000505690 RTL1A6NKG5 1358 aa31.23■■■□□ 2.59
SPOCK1-204ENST00000505690 CCDC9Q9Y3X0 531 aaKnown RBP31.23■■■□□ 2.59
SPOCK1-204ENST00000505690 RXRBP28702 533 aa31.22■■■□□ 2.59
SPOCK1-204ENST00000505690 RBM6P78332 1123 aaKnown RBP31.22■■■□□ 2.59
SPOCK1-204ENST00000505690 BLMP54132 1417 aaPredicted RBP31.22■■■□□ 2.59
SPOCK1-204ENST00000505690 HOXC9P31274 260 aa31.21■■■□□ 2.59
SPOCK1-204ENST00000505690 CNGB1Q14028 1251 aaPredicted RBP31.21■■■□□ 2.59
SPOCK1-204ENST00000505690 GJD4Q96KN9 370 aaPredicted RBP31.21■■■□□ 2.59
SPOCK1-204ENST00000505690 KIF24Q5T7B8 1368 aa31.2■■■□□ 2.59
SPOCK1-204ENST00000505690 MAP2P11137 1827 aaKnown RBP31.2■■■□□ 2.59
SPOCK1-204ENST00000505690 EMILIN1Q9Y6C2 1016 aa31.2■■■□□ 2.59
SPOCK1-204ENST00000505690 PEAK1Q9H792 1746 aa31.2■■■□□ 2.58
SPOCK1-204ENST00000505690 LARP1Q6PKG0 1096 aaKnown RBP31.19■■■□□ 2.58
SPOCK1-204ENST00000505690 POLKQ9UBT6 870 aa31.19■■■□□ 2.58
SPOCK1-204ENST00000505690 GLI3P10071 1580 aa31.18■■■□□ 2.58
SPOCK1-204ENST00000505690 SPATA31A5Q5VU36 1347 aa31.18■■■□□ 2.58
SPOCK1-204ENST00000505690 SPATA31A7Q8IWB4 1347 aa31.18■■■□□ 2.58
SPOCK1-204ENST00000505690 FLT4P35916 1363 aa31.17■■■□□ 2.58
SPOCK1-204ENST00000505690 WDR17Q8IZU2 1322 aa31.17■■■□□ 2.58
SPOCK1-204ENST00000505690 CSB-PGBD3P0DP91 1061 aa31.16■■■□□ 2.58
SPOCK1-204ENST00000505690 ERBB3P21860 1342 aa31.16■■■□□ 2.58
SPOCK1-204ENST00000505690 PPM1GO15355 546 aaPredicted RBP31.15■■■□□ 2.58
SPOCK1-204ENST00000505690 ANKRD24Q8TF21 1146 aa31.15■■■□□ 2.58
SPOCK1-204ENST00000505690 CRB1P82279 1406 aa31.15■■■□□ 2.58
SPOCK1-204ENST00000505690 SPATA31A1Q5TZJ5 1347 aa31.14■■■□□ 2.58
SPOCK1-204ENST00000505690 TOM1L2Q6ZVM7 507 aa31.13■■■□□ 2.57
SPOCK1-204ENST00000505690 INSRP06213 1382 aa31.13■■■□□ 2.57
SPOCK1-204ENST00000505690 SMG6Q86US8 1419 aaKnown RBP31.13■■■□□ 2.57
SPOCK1-204ENST00000505690 HSP90AB2PQ58FF8 381 aa31.12■■■□□ 2.57
SPOCK1-204ENST00000505690 LTV1Q96GA3 475 aaPredicted RBP31.12■■■□□ 2.57
SPOCK1-204ENST00000505690 CDK12Q9NYV4 1490 aaPredicted RBP31.11■■■□□ 2.57
SPOCK1-204ENST00000505690 USP35Q9P2H5 1018 aa31.1■■■□□ 2.57
SPOCK1-204ENST00000505690 FAM208AQ9UK61 1670 aaKnown RBP31.08■■■□□ 2.57
SPOCK1-204ENST00000505690 ILDR2Q71H61 639 aa31.07■■■□□ 2.56
SPOCK1-204ENST00000505690 TCP11L2Q8N4U5 519 aa31.07■■■□□ 2.56
SPOCK1-204ENST00000505690 CARD10Q9BWT7 1032 aa31.07■■■□□ 2.56
SPOCK1-204ENST00000505690 RGS12O14924 1447 aa31.07■■■□□ 2.56
SPOCK1-204ENST00000505690 FAM98CQ17RN3 349 aaKnown RBP31.06■■■□□ 2.56
SPOCK1-204ENST00000505690 NLRP2Q9NX02 1062 aa31.06■■■□□ 2.56
SPOCK1-204ENST00000505690 THRAP3Q9Y2W1 955 aaKnown RBP31.05■■■□□ 2.56
SPOCK1-204ENST00000505690 ONECUT3O60422 494 aaPredicted RBP31.04■■■□□ 2.56
SPOCK1-204ENST00000505690 MTHFSP49914 203 aa31.03■■■□□ 2.56
SPOCK1-204ENST00000505690 BARGINQ6ZT62 677 aa31.03■■■□□ 2.56
SPOCK1-204ENST00000505690 PARD3Q8TEW0 1356 aa31.03■■■□□ 2.56
SPOCK1-204ENST00000505690 SEPT12Q8IYM1 358 aa31■■■□□ 2.55
SPOCK1-204ENST00000505690 THSD7AQ9UPZ6 1657 aa31■■■□□ 2.55
SPOCK1-204ENST00000505690 A0A0G2JS52 829 aa30.99■■■□□ 2.55
SPOCK1-204ENST00000505690 PPP2R1AP30153 589 aa30.99■■■□□ 2.55
SPOCK1-204ENST00000505690 MYT1Q01538 1121 aa30.99■■■□□ 2.55
SPOCK1-204ENST00000505690 RGPD2P0DJD1 1756 aa30.99■■■□□ 2.55
SPOCK1-204ENST00000505690 WNK3Q9BYP7 1800 aa30.97■■■□□ 2.55
SPOCK1-204ENST00000505690 EIF4A2Q14240 407 aaKnown RBP30.97■■■□□ 2.55
SPOCK1-204ENST00000505690 NBPF6Q5VWK0 638 aa30.97■■■□□ 2.55
SPOCK1-204ENST00000505690 NBPF4Q96M43 638 aa30.97■■■□□ 2.55
SPOCK1-204ENST00000505690 RALBP1Q15311 655 aa30.96■■■□□ 2.55
SPOCK1-204ENST00000505690 DISP2A7MBM2 1401 aa30.93■■■□□ 2.54
SPOCK1-204ENST00000505690 CDCA7Q9BWT1 371 aaPredicted RBP30.93■■■□□ 2.54
SPOCK1-204ENST00000505690 USHBP1Q8N6Y0 703 aa30.92■■■□□ 2.54
SPOCK1-204ENST00000505690 PARP4Q9UKK3 1724 aaKnown RBP30.91■■■□□ 2.54
SPOCK1-204ENST00000505690 EYA1Q99502 592 aa30.91■■■□□ 2.54
SPOCK1-204ENST00000505690 BRWD3Q6RI45 1802 aa30.91■■■□□ 2.54
SPOCK1-204ENST00000505690 IL2RBP14784 551 aa30.89■■■□□ 2.54
SPOCK1-204ENST00000505690 COL3A1P02461 1466 aaPredicted RBP30.89■■■□□ 2.53
SPOCK1-204ENST00000505690 IL13P35225 146 aa30.88■■■□□ 2.53
SPOCK1-204ENST00000505690 CFAP53Q96M91 514 aa30.88■■■□□ 2.53
SPOCK1-204ENST00000505690 PRKRIP1Q9H875 184 aaPredicted RBP30.88■■■□□ 2.53
SPOCK1-204ENST00000505690 NCAPD2Q15021 1401 aa30.88■■■□□ 2.53
SPOCK1-204ENST00000505690 LRRC37A3O60309 1634 aa30.87■■■□□ 2.53
SPOCK1-204ENST00000505690 DIAPH1O60610 1272 aaKnown RBP30.86■■■□□ 2.53
SPOCK1-204ENST00000505690 IGSF1Q8N6C5 1336 aa30.85■■■□□ 2.53
SPOCK1-204ENST00000505690 MYBBP1AQ9BQG0 1328 aaKnown RBP30.85■■■□□ 2.53
SPOCK1-204ENST00000505690 KRT27Q7Z3Y8 459 aa30.85■■■□□ 2.53
SPOCK1-204ENST00000505690 DDB1Q16531 1140 aa30.84■■■□□ 2.53
SPOCK1-204ENST00000505690 RGPD1P0DJD0 1748 aa30.83■■■□□ 2.53
SPOCK1-204ENST00000505690 MEGF6O75095 1541 aa30.83■■■□□ 2.53
SPOCK1-204ENST00000505690 PDE3BQ13370 1112 aa30.82■■■□□ 2.52
SPOCK1-204ENST00000505690 RAPGEF4Q8WZA2 1011 aa30.82■■■□□ 2.52
SPOCK1-204ENST00000505690 EXOC5O00471 708 aa30.8■■■□□ 2.52
SPOCK1-204ENST00000505690 TNS2Q63HR2 1409 aa30.8■■■□□ 2.52
SPOCK1-204ENST00000505690 TATP17735 454 aaPredicted RBP30.79■■■□□ 2.52
SPOCK1-204ENST00000505690 OVOS2A0A0G2JMS6 1433 aa30.78■■■□□ 2.52
SPOCK1-204ENST00000505690 ANP32CO43423 234 aa30.76■■■□□ 2.51
SPOCK1-204ENST00000505690 SULT6B1Q6IMI4 303 aa30.75■■■□□ 2.51
SPOCK1-204ENST00000505690 U2SURPO15042 1029 aaKnown RBP30.74■■■□□ 2.51
SPOCK1-204ENST00000505690 AEBP1Q8IUX7 1158 aa30.74■■■□□ 2.51
SPOCK1-204ENST00000505690 NUDCQ9Y266 331 aa30.74■■■□□ 2.51
SPOCK1-204ENST00000505690 KDRP35968 1356 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms