RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
CCHCR1-219ENST00000505392 EXOC5O00471 708 aa16.86■□□□□ 0.29
CCHCR1-219ENST00000505392 MTFR1LQ9H019 292 aa16.86■□□□□ 0.29
CCHCR1-219ENST00000505392 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
CCHCR1-219ENST00000505392 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
CCHCR1-219ENST00000505392 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
CCHCR1-219ENST00000505392 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
CCHCR1-219ENST00000505392 SGIP1Q9BQI5 828 aa16.84■□□□□ 0.29
CCHCR1-219ENST00000505392 WDR17Q8IZU2 1322 aa16.84■□□□□ 0.29
CCHCR1-219ENST00000505392 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
CCHCR1-219ENST00000505392 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
CCHCR1-219ENST00000505392 ARHGEF28Q8N1W1 1705 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-219ENST00000505392 ARXQ96QS3 562 aa16.83■□□□□ 0.28
CCHCR1-219ENST00000505392 CASZ1Q86V15 1759 aa16.82■□□□□ 0.28
CCHCR1-219ENST00000505392 BCL9O00512 1426 aa16.82■□□□□ 0.28
CCHCR1-219ENST00000505392 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-219ENST00000505392 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
CCHCR1-219ENST00000505392 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
CCHCR1-219ENST00000505392 SOX12O15370 315 aa16.8■□□□□ 0.28
CCHCR1-219ENST00000505392 GPR162Q16538 588 aa16.8■□□□□ 0.28
CCHCR1-219ENST00000505392 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
CCHCR1-219ENST00000505392 RGPD3A6NKT7 1758 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 RGPD4Q7Z3J3 1758 aa16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 MYOM1P52179 1685 aa16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 ACSBG1Q96GR2 724 aa16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 USP6P35125 1406 aa16.79■□□□□ 0.28
CCHCR1-219ENST00000505392 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
CCHCR1-219ENST00000505392 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
CCHCR1-219ENST00000505392 KCNH5Q8NCM2 988 aa16.78■□□□□ 0.28
CCHCR1-219ENST00000505392 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-219ENST00000505392 SLIT3O75094 1523 aa16.75■□□□□ 0.27
CCHCR1-219ENST00000505392 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
CCHCR1-219ENST00000505392 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
CCHCR1-219ENST00000505392 TTC21BQ7Z4L5 1316 aa16.73■□□□□ 0.27
CCHCR1-219ENST00000505392 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-219ENST00000505392 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-219ENST00000505392 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
CCHCR1-219ENST00000505392 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
CCHCR1-219ENST00000505392 CCDC7Q96M83 1385 aa16.72■□□□□ 0.27
CCHCR1-219ENST00000505392 COL18A1P39060 1754 aa16.72■□□□□ 0.27
CCHCR1-219ENST00000505392 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
CCHCR1-219ENST00000505392 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
CCHCR1-219ENST00000505392 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
CCHCR1-219ENST00000505392 POLD1P28340 1107 aa16.69■□□□□ 0.26
CCHCR1-219ENST00000505392 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
CCHCR1-219ENST00000505392 CHD4Q14839 1912 aa16.68■□□□□ 0.26
CCHCR1-219ENST00000505392 IL2RBP14784 551 aa16.68■□□□□ 0.26
CCHCR1-219ENST00000505392 TTC21AQ8NDW8 1320 aa16.68■□□□□ 0.26
CCHCR1-219ENST00000505392 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
CCHCR1-219ENST00000505392 TNS2Q63HR2 1409 aa16.67■□□□□ 0.26
CCHCR1-219ENST00000505392 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
CCHCR1-219ENST00000505392 NLGN2Q8NFZ4 835 aa16.65■□□□□ 0.26
CCHCR1-219ENST00000505392 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
CCHCR1-219ENST00000505392 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
CCHCR1-219ENST00000505392 KIAA1210Q9ULL0 1709 aa16.65■□□□□ 0.26
CCHCR1-219ENST00000505392 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
CCHCR1-219ENST00000505392 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCHCR1-219ENST00000505392 ERBB3P21860 1342 aa16.64■□□□□ 0.25
CCHCR1-219ENST00000505392 KCNQ4P56696 695 aa16.63■□□□□ 0.25
CCHCR1-219ENST00000505392 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-219ENST00000505392 RGPD5Q99666 1765 aa16.63■□□□□ 0.25
CCHCR1-219ENST00000505392 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
CCHCR1-219ENST00000505392 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
CCHCR1-219ENST00000505392 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
CCHCR1-219ENST00000505392 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
CCHCR1-219ENST00000505392 KTN1Q86UP2 1357 aaKnown RBP16.62■□□□□ 0.25
CCHCR1-219ENST00000505392 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
CCHCR1-219ENST00000505392 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
CCHCR1-219ENST00000505392 TRPM1Q7Z4N2 1603 aa16.6■□□□□ 0.25
CCHCR1-219ENST00000505392 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCHCR1-219ENST00000505392 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
CCHCR1-219ENST00000505392 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
CCHCR1-219ENST00000505392 NME9Q86XW9 330 aa16.59■□□□□ 0.25
CCHCR1-219ENST00000505392 NFAT5O94916 1531 aa16.59■□□□□ 0.25
CCHCR1-219ENST00000505392 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
CCHCR1-219ENST00000505392 MSH5O43196 834 aa16.58■□□□□ 0.24
CCHCR1-219ENST00000505392 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-219ENST00000505392 L3MBTL2Q969R5 705 aa16.58■□□□□ 0.24
CCHCR1-219ENST00000505392 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.24
CCHCR1-219ENST00000505392 KAT6BQ8WYB5 2073 aa16.57■□□□□ 0.24
CCHCR1-219ENST00000505392 ABCC6O95255 1503 aa16.57■□□□□ 0.24
CCHCR1-219ENST00000505392 USP31Q70CQ4 1352 aa16.57■□□□□ 0.24
CCHCR1-219ENST00000505392 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-219ENST00000505392 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
CCHCR1-219ENST00000505392 BTAF1O14981 1849 aa16.54■□□□□ 0.24
CCHCR1-219ENST00000505392 TMC1Q8TDI8 760 aa16.54■□□□□ 0.24
CCHCR1-219ENST00000505392 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
CCHCR1-219ENST00000505392 IP6K1Q92551 441 aa16.53■□□□□ 0.24
CCHCR1-219ENST00000505392 CCNL1Q9UK58 526 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-219ENST00000505392 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
CCHCR1-219ENST00000505392 SHANK3Q9BYB0 1731 aa16.52■□□□□ 0.24
CCHCR1-219ENST00000505392 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-219ENST00000505392 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-219ENST00000505392 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
CCHCR1-219ENST00000505392 SLC12A5Q9H2X9 1139 aa16.51■□□□□ 0.23
CCHCR1-219ENST00000505392 ATP10DQ9P241 1426 aa16.51■□□□□ 0.23
CCHCR1-219ENST00000505392 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
CCHCR1-219ENST00000505392 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms