RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-208	ENST00000505187	IP6K1	Q92551	441 aa		28.09	■■■□□ 2.09
SPOCK3-208	ENST00000505187	HSP90AB2P	Q58FF8	381 aa		28.08	■■■□□ 2.09
SPOCK3-208	ENST00000505187	U2SURP	O15042	1029 aa	Known RBP	28.07	■■■□□ 2.08
SPOCK3-208	ENST00000505187	CPD	O75976	1380 aa		28.07	■■■□□ 2.08
SPOCK3-208	ENST00000505187	ZBED9	Q6R2W3	1325 aa		28.07	■■■□□ 2.08
SPOCK3-208	ENST00000505187	EIF4A2	Q14240	407 aa	Known RBP	28.07	■■■□□ 2.08
SPOCK3-208	ENST00000505187	COL18A1	P39060	1754 aa		28.06	■■■□□ 2.08
SPOCK3-208	ENST00000505187	CENPB	P07199	599 aa	Predicted RBP	28.06	■■■□□ 2.08
SPOCK3-208	ENST00000505187	PNN	Q9H307	717 aa	Known RBP	28.06	■■■□□ 2.08
SPOCK3-208	ENST00000505187	PIP4K2B	P78356	416 aa		28.04	■■■□□ 2.08
SPOCK3-208	ENST00000505187	FCHSD2	O94868	740 aa		28.03	■■■□□ 2.08
SPOCK3-208	ENST00000505187	RUNDC1	Q96C34	613 aa		28.03	■■■□□ 2.08
SPOCK3-208	ENST00000505187	RGPD5	Q99666	1765 aa		28.03	■■■□□ 2.08
SPOCK3-208	ENST00000505187	NGEF	Q8N5V2	710 aa		28.03	■■■□□ 2.08
SPOCK3-208	ENST00000505187	CABLES1	Q8TDN4	633 aa		28.02	■■■□□ 2.08
SPOCK3-208	ENST00000505187	PLEKHG5	O94827	1062 aa		27.99	■■■□□ 2.07
SPOCK3-208	ENST00000505187	ZC3H6	P61129	1189 aa	Known RBP	27.99	■■■□□ 2.07
SPOCK3-208	ENST00000505187	CCDC146	Q8IYE0	955 aa		27.98	■■■□□ 2.07
SPOCK3-208	ENST00000505187	FAM208A	Q9UK61	1670 aa	Known RBP	27.98	■■■□□ 2.07
SPOCK3-208	ENST00000505187	NCBP3	Q53F19	620 aa	Known RBP	27.97	■■■□□ 2.07
SPOCK3-208	ENST00000505187	RSPH6A	Q9H0K4	717 aa		27.97	■■■□□ 2.07
SPOCK3-208	ENST00000505187	IGSF1	Q8N6C5	1336 aa		27.97	■■■□□ 2.07
SPOCK3-208	ENST00000505187	KIAA0232	Q92628	1395 aa		27.96	■■■□□ 2.07
SPOCK3-208	ENST00000505187	PLEKHF1	Q96S99	279 aa		27.96	■■■□□ 2.07
SPOCK3-208	ENST00000505187	ZBTB7C	A1YPR0	619 aa		27.95	■■■□□ 2.07
SPOCK3-208	ENST00000505187	HAP1	P54257	671 aa	Predicted RBP	27.95	■■■□□ 2.07
SPOCK3-208	ENST00000505187	LMO7	Q8WWI1	1683 aa		27.95	■■■□□ 2.07
SPOCK3-208	ENST00000505187	CAMTA1	Q9Y6Y1	1673 aa		27.95	■■■□□ 2.07
SPOCK3-208	ENST00000505187	KDR	P35968	1356 aa		27.95	■■■□□ 2.06
SPOCK3-208	ENST00000505187	RGPD2	P0DJD1	1756 aa		27.93	■■■□□ 2.06
SPOCK3-208	ENST00000505187	APAF1	O14727	1248 aa		27.93	■■■□□ 2.06
SPOCK3-208	ENST00000505187	MAPK8IP3	Q9UPT6	1336 aa		27.93	■■■□□ 2.06
SPOCK3-208	ENST00000505187	NEFM	P07197	916 aa		27.92	■■■□□ 2.06
SPOCK3-208	ENST00000505187	EYA1	Q99502	592 aa		27.92	■■■□□ 2.06
SPOCK3-208	ENST00000505187	PRKAR2B	P31323	418 aa		27.91	■■■□□ 2.06
SPOCK3-208	ENST00000505187	HMOX1	P09601	288 aa		27.9	■■■□□ 2.06
SPOCK3-208	ENST00000505187	TCP11L2	Q8N4U5	519 aa		27.9	■■■□□ 2.06
SPOCK3-208	ENST00000505187	PRDM11	Q9NQV5	511 aa		27.9	■■■□□ 2.06
SPOCK3-208	ENST00000505187	NCAPD2	Q15021	1401 aa		27.9	■■■□□ 2.06
SPOCK3-208	ENST00000505187	SULT6B1	Q6IMI4	303 aa		27.9	■■■□□ 2.06
SPOCK3-208	ENST00000505187	AXIN2	Q9Y2T1	843 aa		27.9	■■■□□ 2.06
SPOCK3-208	ENST00000505187	COL14A1	Q05707	1796 aa	Known RBP	27.89	■■■□□ 2.06
SPOCK3-208	ENST00000505187	ANKRD24	Q8TF21	1146 aa		27.89	■■■□□ 2.05
SPOCK3-208	ENST00000505187	LTV1	Q96GA3	475 aa	Predicted RBP	27.89	■■■□□ 2.05
SPOCK3-208	ENST00000505187	ERBB3	P21860	1342 aa		27.89	■■■□□ 2.05
SPOCK3-208	ENST00000505187	PDE3B	Q13370	1112 aa		27.86	■■■□□ 2.05
SPOCK3-208	ENST00000505187	JCAD	Q9P266	1359 aa		27.86	■■■□□ 2.05
SPOCK3-208	ENST00000505187	CCDC27	Q2M243	656 aa		27.86	■■■□□ 2.05
SPOCK3-208	ENST00000505187	AEBP1	Q8IUX7	1158 aa		27.86	■■■□□ 2.05
SPOCK3-208	ENST00000505187	DLG5	Q8TDM6	1919 aa		27.85	■■■□□ 2.05
SPOCK3-208	ENST00000505187	ZNF521	Q96K83	1311 aa		27.85	■■■□□ 2.05
SPOCK3-208	ENST00000505187	CHRNA2	Q15822	529 aa		27.85	■■■□□ 2.05
SPOCK3-208	ENST00000505187	TMPO	P42166	694 aa	Known RBP	27.83	■■■□□ 2.05
SPOCK3-208	ENST00000505187	PHF23	Q9BUL5	403 aa	Predicted RBP	27.83	■■■□□ 2.05
SPOCK3-208	ENST00000505187	NBPF6	Q5VWK0	638 aa		27.82	■■■□□ 2.04
SPOCK3-208	ENST00000505187	NBPF4	Q96M43	638 aa		27.82	■■■□□ 2.04
SPOCK3-208	ENST00000505187	SALL2	Q9Y467	1007 aa	Predicted RBP	27.82	■■■□□ 2.04
SPOCK3-208	ENST00000505187	COL5A2	P05997	1499 aa	Predicted RBP	27.81	■■■□□ 2.04
SPOCK3-208	ENST00000505187	SENP3-EIF4A1	A0A087X0R7	540 aa		27.81	■■■□□ 2.04
SPOCK3-208	ENST00000505187	NFE2L2	Q16236	605 aa		27.8	■■■□□ 2.04
SPOCK3-208	ENST00000505187	PHACTR3	Q96KR7	559 aa		27.8	■■■□□ 2.04
SPOCK3-208	ENST00000505187	PLEKHG2	Q9H7P9	1386 aa		27.78	■■■□□ 2.04
SPOCK3-208	ENST00000505187	FAM83G	A6ND36	823 aa		27.77	■■■□□ 2.04
SPOCK3-208	ENST00000505187	PLCH1	Q4KWH8	1693 aa		27.77	■■■□□ 2.04
SPOCK3-208	ENST00000505187	WDR17	Q8IZU2	1322 aa		27.77	■■■□□ 2.04
SPOCK3-208	ENST00000505187	RRP7A	Q9Y3A4	280 aa	Known RBP	27.77	■■■□□ 2.04
SPOCK3-208	ENST00000505187	WWC1	Q8IX03	1113 aa		27.76	■■■□□ 2.03
SPOCK3-208	ENST00000505187	NWD2	Q9ULI1	1742 aa		27.75	■■■□□ 2.03
SPOCK3-208	ENST00000505187	CSB-PGBD3	P0DP91	1061 aa		27.75	■■■□□ 2.03
SPOCK3-208	ENST00000505187	RIPK4	P57078	832 aa		27.75	■■■□□ 2.03
SPOCK3-208	ENST00000505187	SPATA31A6	Q5VVP1	1343 aa		27.75	■■■□□ 2.03
SPOCK3-208	ENST00000505187	NEUROD2	Q15784	382 aa		27.74	■■■□□ 2.03
SPOCK3-208	ENST00000505187	GOLGA2	Q08379	1002 aa		27.73	■■■□□ 2.03
SPOCK3-208	ENST00000505187	LMOD3	Q0VAK6	560 aa		27.73	■■■□□ 2.03
SPOCK3-208	ENST00000505187	WDR63	Q8IWG1	891 aa		27.73	■■■□□ 2.03
SPOCK3-208	ENST00000505187	USHBP1	Q8N6Y0	703 aa		27.73	■■■□□ 2.03
SPOCK3-208	ENST00000505187	NLRP2	Q9NX02	1062 aa		27.73	■■■□□ 2.03
SPOCK3-208	ENST00000505187	GAS2L2	Q8NHY3	880 aa		27.73	■■■□□ 2.03
SPOCK3-208	ENST00000505187	HSPA1L	P34931	641 aa		27.72	■■■□□ 2.03
SPOCK3-208	ENST00000505187	TRIM35	Q9UPQ4	493 aa		27.71	■■■□□ 2.03
SPOCK3-208	ENST00000505187	NRAP	Q86VF7	1730 aa		27.71	■■■□□ 2.03
SPOCK3-208	ENST00000505187	PARP4	Q9UKK3	1724 aa	Known RBP	27.68	■■■□□ 2.02
SPOCK3-208	ENST00000505187	BTG4	Q9NY30	223 aa		27.68	■■■□□ 2.02
SPOCK3-208	ENST00000505187	EVA1C	P58658	441 aa		27.67	■■■□□ 2.02
SPOCK3-208	ENST00000505187	MTHFSD	Q2M296	383 aa	Known RBP	27.67	■■■□□ 2.02
SPOCK3-208	ENST00000505187	CARD10	Q9BWT7	1032 aa		27.67	■■■□□ 2.02
SPOCK3-208	ENST00000505187	IL16	Q14005	1332 aa		27.67	■■■□□ 2.02
SPOCK3-208	ENST00000505187	CRB1	P82279	1406 aa		27.67	■■■□□ 2.02
SPOCK3-208	ENST00000505187	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	NUTM2E	B1AL46	878 aa	Predicted RBP	27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187		E9PSI1	815 aa		27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	ADAMTS2	O95450	1211 aa		27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	SLFN5	Q08AF3	891 aa		27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	AMOT	Q4VCS5	1084 aa		27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	TOM1L2	Q6ZVM7	507 aa		27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	PKD1L3	Q7Z443	1732 aa		27.66	■■■□□ 2.02
SPOCK3-208	ENST00000505187	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.65	■■■□□ 2.02
SPOCK3-208	ENST00000505187	CDCA7L	Q96GN5	454 aa		27.65	■■■□□ 2.02
SPOCK3-208	ENST00000505187	SLIT2	O94813	1529 aa		27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms