RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 TCEAL9Q9UHQ7 104 aa9.21□□□□□ -0.94
CDH9-202ENST00000505020 TPX2Q9ULW0 747 aaKnown RBP9.21□□□□□ -0.94
CDH9-202ENST00000505020 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
CDH9-202ENST00000505020 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
CDH9-202ENST00000505020 NT5DC4Q86YG4 428 aa9.2□□□□□ -0.94
CDH9-202ENST00000505020 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
CDH9-202ENST00000505020 IL17RAQ96F46 866 aa9.2□□□□□ -0.94
CDH9-202ENST00000505020 GJD4Q96KN9 370 aaPredicted RBP9.2□□□□□ -0.94
CDH9-202ENST00000505020 NLRP2Q9NX02 1062 aa9.2□□□□□ -0.94
CDH9-202ENST00000505020 SCNN1AP37088 669 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 PCGF5Q86SE9 256 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 CREBRFQ8IUR6 639 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 ERBB3P21860 1342 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 RBL2Q08999 1139 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
CDH9-202ENST00000505020 CSPP1Q1MSJ5 1256 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 RIC3Q7Z5B4 369 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 SFMBT1Q9UHJ3 866 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 FRMD4BQ9Y2L6 1034 aa9.19□□□□□ -0.94
CDH9-202ENST00000505020 USP17L8P0C7I0 530 aa9.18□□□□□ -0.94
CDH9-202ENST00000505020 LDLRAD1Q5T700 205 aa9.18□□□□□ -0.94
CDH9-202ENST00000505020 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
CDH9-202ENST00000505020 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDH9-202ENST00000505020 INO80BQ9C086 356 aaPredicted RBP9.18□□□□□ -0.94
CDH9-202ENST00000505020 NRDCO43847 1150 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 HSP90AA1P07900 732 aaKnown RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 MRPL58Q14197 206 aaKnown RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 METTL16Q86W50 562 aaKnown RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 L3MBTL3Q96JM7 780 aaPredicted RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 ZNF512BQ96KM6 892 aaPredicted RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 TSPAN18Q96SJ8 248 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 OSBPL2Q9H1P3 480 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 NOVA2Q9UNW9 492 aaKnown RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 DHX16O60231 1041 aaKnown RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 DSG2Q14126 1118 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 UBE4AQ14139 1066 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 DHX8Q14562 1220 aaKnown RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 ICE2Q659A1 982 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 PPP1R18Q6NYC8 613 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
CDH9-202ENST00000505020 NUB1Q9Y5A7 615 aa9.17□□□□□ -0.94
CDH9-202ENST00000505020 GPR37L1O60883 481 aa9.16□□□□□ -0.94
CDH9-202ENST00000505020 DNAJC6O75061 913 aa9.16□□□□□ -0.94
CDH9-202ENST00000505020 ENOX2Q16206 610 aaKnown RBP9.16□□□□□ -0.94
CDH9-202ENST00000505020 MAP9Q49MG5 647 aa9.16□□□□□ -0.94
CDH9-202ENST00000505020 DDX12PQ92771 950 aa9.16□□□□□ -0.94
CDH9-202ENST00000505020 EPAS1Q99814 870 aa9.16□□□□□ -0.94
CDH9-202ENST00000505020 CD53P19397 219 aa9.15□□□□□ -0.94
CDH9-202ENST00000505020 DNAJA1P31689 397 aaKnown RBP9.15□□□□□ -0.94
CDH9-202ENST00000505020 POU5F1Q01860 360 aaKnown RBP9.15□□□□□ -0.94
CDH9-202ENST00000505020 C1orf131Q8NDD1 294 aaKnown RBP9.15□□□□□ -0.94
CDH9-202ENST00000505020 TSC1Q92574 1164 aa9.15□□□□□ -0.94
CDH9-202ENST00000505020 NAP1L4Q99733 375 aaKnown RBP9.15□□□□□ -0.94
CDH9-202ENST00000505020 GEMIN8Q9NWZ8 242 aaKnown RBP9.15□□□□□ -0.94
CDH9-202ENST00000505020 SCINQ9Y6U3 715 aa9.15□□□□□ -0.94
CDH9-202ENST00000505020 GOLGA6CA6NDK9 693 aa9.15□□□□□ -0.95
CDH9-202ENST00000505020 GOLGA6BA6NDN3 693 aa9.15□□□□□ -0.95
CDH9-202ENST00000505020 GOLGA6DP0CG33 693 aa9.15□□□□□ -0.95
CDH9-202ENST00000505020 SAFB2Q14151 953 aaKnown RBP eCLIP9.15□□□□□ -0.95
CDH9-202ENST00000505020 QPCTQ16769 361 aa9.15□□□□□ -0.95
CDH9-202ENST00000505020 CCDC184Q52MB2 194 aa9.15□□□□□ -0.95
CDH9-202ENST00000505020 ZNF579Q8NAF0 562 aaKnown RBP9.15□□□□□ -0.95
CDH9-202ENST00000505020 GOLGA6AQ9NYA3 693 aa9.15□□□□□ -0.95
CDH9-202ENST00000505020 PDGFRBP09619 1106 aa9.14□□□□□ -0.95
CDH9-202ENST00000505020 PDILTQ8N807 584 aa9.14□□□□□ -0.95
CDH9-202ENST00000505020 CEP63Q96MT8 703 aa9.14□□□□□ -0.95
CDH9-202ENST00000505020 TTF2Q9UNY4 1162 aaKnown RBP9.14□□□□□ -0.95
CDH9-202ENST00000505020 C8orf48Q96LL4 319 aa9.13□□□□□ -0.95
CDH9-202ENST00000505020 GMLQ99445 158 aa9.13□□□□□ -0.95
CDH9-202ENST00000505020 TGIF2Q9GZN2 237 aa9.13□□□□□ -0.95
CDH9-202ENST00000505020 CCSER2Q9H7U1 834 aa9.13□□□□□ -0.95
CDH9-202ENST00000505020 DIXDC1Q155Q3 683 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 GOLIM4O00461 696 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 ATP9BO43861 1147 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 LDHAP00338 332 aaKnown RBP9.12□□□□□ -0.95
CDH9-202ENST00000505020 MAPK1P28482 360 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 AMPD3Q01432 767 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 ODR4Q5SWX8 454 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 ACBD3Q9H3P7 528 aa9.12□□□□□ -0.95
CDH9-202ENST00000505020 PDE6BP35913 854 aa9.11□□□□□ -0.95
CDH9-202ENST00000505020 TNNI2P48788 182 aa9.11□□□□□ -0.95
CDH9-202ENST00000505020 TTC39BQ5VTQ0 682 aaPredicted RBP9.11□□□□□ -0.95
CDH9-202ENST00000505020 SH3BP1Q9Y3L3 701 aa9.11□□□□□ -0.95
CDH9-202ENST00000505020 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
CDH9-202ENST00000505020 MAN1A1P33908 653 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 EAPPQ56P03 285 aaPredicted RBP9.1□□□□□ -0.95
CDH9-202ENST00000505020 SOGA3Q5TF21 947 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 TMEM87AQ8NBN3 555 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 MPHOSPH6Q99547 160 aaKnown RBP9.1□□□□□ -0.95
CDH9-202ENST00000505020 C19orf67A6NJJ6 358 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 EFCAB2Q5VUJ9 269 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 KLF15Q9UIH9 416 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
CDH9-202ENST00000505020 FGAP02671 866 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms