RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
UBE2D3-218ENST00000505009 ZBBXA8MT70 800 aa10.54□□□□□ -0.72
UBE2D3-218ENST00000505009 NDUFB9Q9Y6M9 179 aa10.54□□□□□ -0.72
UBE2D3-218ENST00000505009 SOCS7O14512 581 aa10.53□□□□□ -0.72
UBE2D3-218ENST00000505009 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-218ENST00000505009 CCDC116Q8IYX3 515 aa10.53□□□□□ -0.72
UBE2D3-218ENST00000505009 TBC1D2BQ9UPU7 963 aa10.53□□□□□ -0.72
UBE2D3-218ENST00000505009 RAB15P59190 212 aa10.52□□□□□ -0.73
UBE2D3-218ENST00000505009 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-218ENST00000505009 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-218ENST00000505009 ZNF775Q96BV0 537 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-218ENST00000505009 TRIM47Q96LD4 638 aa10.52□□□□□ -0.73
UBE2D3-218ENST00000505009 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-218ENST00000505009 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
UBE2D3-218ENST00000505009 CDV3Q9UKY7 258 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-218ENST00000505009 PCDHB9Q9Y5E1 797 aa10.5□□□□□ -0.73
UBE2D3-218ENST00000505009 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-218ENST00000505009 SENP2Q9HC62 589 aa10.49□□□□□ -0.73
UBE2D3-218ENST00000505009 EMILIN1Q9Y6C2 1016 aa10.49□□□□□ -0.73
UBE2D3-218ENST00000505009 NR1H3Q13133 447 aa10.48□□□□□ -0.73
UBE2D3-218ENST00000505009 CBLBQ13191 982 aa10.48□□□□□ -0.73
UBE2D3-218ENST00000505009 MCM6Q14566 821 aa10.48□□□□□ -0.73
UBE2D3-218ENST00000505009 NBPF20Q3BBV1 942 aa10.48□□□□□ -0.73
UBE2D3-218ENST00000505009 TMPRSS4Q9NRS4 437 aa10.48□□□□□ -0.73
UBE2D3-218ENST00000505009 C6orf118Q5T5N4 469 aa10.47□□□□□ -0.73
UBE2D3-218ENST00000505009 MEIOBQ8N635 442 aa10.47□□□□□ -0.73
UBE2D3-218ENST00000505009 APBB1O00213 710 aa10.46□□□□□ -0.73
UBE2D3-218ENST00000505009 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
UBE2D3-218ENST00000505009 IRF5Q13568 498 aa10.46□□□□□ -0.73
UBE2D3-218ENST00000505009 GDPD2Q9HCC8 539 aa10.46□□□□□ -0.73
UBE2D3-218ENST00000505009 ESPNB1AK53 854 aa10.45□□□□□ -0.74
UBE2D3-218ENST00000505009 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
UBE2D3-218ENST00000505009 KIFC2Q96AC6 838 aa10.45□□□□□ -0.74
UBE2D3-218ENST00000505009 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
UBE2D3-218ENST00000505009 SOBPA7XYQ1 873 aa10.43□□□□□ -0.74
UBE2D3-218ENST00000505009 DHX9Q08211 1270 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-218ENST00000505009 SCARF1Q14162 830 aa10.43□□□□□ -0.74
UBE2D3-218ENST00000505009 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
UBE2D3-218ENST00000505009 ZNF784Q8NCA9 323 aaPredicted RBP10.43□□□□□ -0.74
UBE2D3-218ENST00000505009 BMP2P12643 396 aa10.42□□□□□ -0.74
UBE2D3-218ENST00000505009 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
UBE2D3-218ENST00000505009 ABL2P42684 1182 aa10.41□□□□□ -0.74
UBE2D3-218ENST00000505009 Q6ZVU0 165 aa10.41□□□□□ -0.74
UBE2D3-218ENST00000505009 AGBL1Q96MI9 1066 aa10.41□□□□□ -0.74
UBE2D3-218ENST00000505009 LILRA1O75019 489 aa10.4□□□□□ -0.74
UBE2D3-218ENST00000505009 ADD1P35611 737 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-218ENST00000505009 VAC14Q08AM6 782 aa10.39□□□□□ -0.75
UBE2D3-218ENST00000505009 POM121Q96HA1 1249 aa10.39□□□□□ -0.75
UBE2D3-218ENST00000505009 PRM3Q9NNZ6 103 aa10.39□□□□□ -0.75
UBE2D3-218ENST00000505009 CYLDQ9NQC7 956 aa10.39□□□□□ -0.75
UBE2D3-218ENST00000505009 UPP2O95045 317 aa10.38□□□□□ -0.75
UBE2D3-218ENST00000505009 TSEN34Q9BSV6 310 aaKnown RBP10.38□□□□□ -0.75
UBE2D3-218ENST00000505009 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
UBE2D3-218ENST00000505009 RELBQ01201 579 aa10.37□□□□□ -0.75
UBE2D3-218ENST00000505009 SEPT12Q8IYM1 358 aa10.37□□□□□ -0.75
UBE2D3-218ENST00000505009 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-218ENST00000505009 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-218ENST00000505009 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
UBE2D3-218ENST00000505009 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-218ENST00000505009 LCE2AQ5TA79 106 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-218ENST00000505009 ZNF395Q9H8N7 513 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-218ENST00000505009 DNMT3LQ9UJW3 386 aa10.34□□□□□ -0.75
UBE2D3-218ENST00000505009 SPINT1O43278 529 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 ADH1AP07327 375 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 SCTRP47872 440 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 VEGFBP49765 207 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 MCCD1P59942 119 aaPredicted RBP10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 LCE2CQ5TA81 110 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 TREML4Q6UXN2 200 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 PCDHB11Q9Y5F2 797 aa10.33□□□□□ -0.76
UBE2D3-218ENST00000505009 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
UBE2D3-218ENST00000505009 MAN1A2O60476 641 aa10.32□□□□□ -0.76
UBE2D3-218ENST00000505009 CCDC85AQ96PX6 553 aaPredicted RBP10.32□□□□□ -0.76
UBE2D3-218ENST00000505009 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
UBE2D3-218ENST00000505009 FIGNL2A6NMB9 653 aa10.31□□□□□ -0.76
UBE2D3-218ENST00000505009 CTSOP43234 321 aaPredicted RBP10.31□□□□□ -0.76
UBE2D3-218ENST00000505009 EIF4G2P78344 907 aaKnown RBP eCLIP10.31□□□□□ -0.76
UBE2D3-218ENST00000505009 TSGA10IPQ3SY00 556 aa10.31□□□□□ -0.76
UBE2D3-218ENST00000505009 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
UBE2D3-218ENST00000505009 TTLL8A6PVC2 850 aa10.3□□□□□ -0.76
UBE2D3-218ENST00000505009 WFS1O76024 890 aa10.3□□□□□ -0.76
UBE2D3-218ENST00000505009 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
UBE2D3-218ENST00000505009 PTGIRP43119 386 aa10.29□□□□□ -0.76
UBE2D3-218ENST00000505009 ERVK-9P63128 1117 aa10.29□□□□□ -0.76
UBE2D3-218ENST00000505009 FLIIQ13045 1269 aa10.29□□□□□ -0.76
UBE2D3-218ENST00000505009 ZNF592Q92610 1267 aa10.29□□□□□ -0.76
UBE2D3-218ENST00000505009 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
UBE2D3-218ENST00000505009 UBTFP17480 764 aaKnown RBP10.28□□□□□ -0.76
UBE2D3-218ENST00000505009 WASHC4Q2M389 1173 aa10.28□□□□□ -0.76
UBE2D3-218ENST00000505009 CC2D2BQ6DHV5 1058 aa10.28□□□□□ -0.76
UBE2D3-218ENST00000505009 PHTF2Q8N3S3 785 aa10.28□□□□□ -0.76
UBE2D3-218ENST00000505009 POLMQ9NP87 494 aaPredicted RBP10.27□□□□□ -0.77
UBE2D3-218ENST00000505009 OSBPL3Q9H4L5 887 aa10.26□□□□□ -0.77
UBE2D3-218ENST00000505009 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
UBE2D3-218ENST00000505009 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
UBE2D3-218ENST00000505009 RAD21O60216 631 aa10.24□□□□□ -0.77
UBE2D3-218ENST00000505009 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
UBE2D3-218ENST00000505009 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
UBE2D3-218ENST00000505009 RNF217Q8TC41 542 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms