RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 PURBQ96QR8 312 aaKnown RBP6.37□□□□□ -1.39
RFC1-209ENST00000504974 ARHGAP9Q9BRR9 750 aa6.37□□□□□ -1.39
RFC1-209ENST00000504974 RAB15P59190 212 aa6.36□□□□□ -1.39
RFC1-209ENST00000504974 C6orf118Q5T5N4 469 aa6.36□□□□□ -1.39
RFC1-209ENST00000504974 ARMC2Q8NEN0 867 aa6.36□□□□□ -1.39
RFC1-209ENST00000504974 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
RFC1-209ENST00000504974 APBB1O00213 710 aa6.35□□□□□ -1.39
RFC1-209ENST00000504974 ABL2P42684 1182 aa6.35□□□□□ -1.39
RFC1-209ENST00000504974 MPNDQ8N594 471 aa6.35□□□□□ -1.39
RFC1-209ENST00000504974 ADAM32Q8TC27 787 aa6.35□□□□□ -1.39
RFC1-209ENST00000504974 GDPD2Q9HCC8 539 aa6.35□□□□□ -1.39
RFC1-209ENST00000504974 PRM3Q9NNZ6 103 aa6.35□□□□□ -1.39
RFC1-209ENST00000504974 CBLBQ13191 982 aa6.34□□□□□ -1.39
RFC1-209ENST00000504974 PDXDC2PQ6P474 469 aa6.34□□□□□ -1.39
RFC1-209ENST00000504974 ZBTB33Q86T24 672 aa6.34□□□□□ -1.39
RFC1-209ENST00000504974 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
RFC1-209ENST00000504974 COG6Q9Y2V7 657 aa6.34□□□□□ -1.39
RFC1-209ENST00000504974 NR5A1Q13285 461 aa6.33□□□□□ -1.4
RFC1-209ENST00000504974 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
RFC1-209ENST00000504974 MRPL14Q6P1L8 145 aaKnown RBP6.33□□□□□ -1.4
RFC1-209ENST00000504974 TBC1D2BQ9UPU7 963 aa6.33□□□□□ -1.4
RFC1-209ENST00000504974 ARID3CA6NKF2 412 aa6.32□□□□□ -1.4
RFC1-209ENST00000504974 NFX1Q12986 1120 aaKnown RBP6.32□□□□□ -1.4
RFC1-209ENST00000504974 PPP1R26Q5T8A7 1209 aaPredicted RBP6.32□□□□□ -1.4
RFC1-209ENST00000504974 TREML4Q6UXN2 200 aa6.32□□□□□ -1.4
RFC1-209ENST00000504974 PROSER2Q86WR7 435 aaPredicted RBP6.32□□□□□ -1.4
RFC1-209ENST00000504974 TRMT44Q8IYL2 757 aaKnown RBP6.32□□□□□ -1.4
RFC1-209ENST00000504974 KCTD15Q96SI1 283 aaPredicted RBP6.32□□□□□ -1.4
RFC1-209ENST00000504974 SENP2Q9HC62 589 aa6.32□□□□□ -1.4
RFC1-209ENST00000504974 TMPRSS4Q9NRS4 437 aa6.32□□□□□ -1.4
RFC1-209ENST00000504974 NDUFB9Q9Y6M9 179 aa6.32□□□□□ -1.4
RFC1-209ENST00000504974 A6NJR5 290 aa6.31□□□□□ -1.4
RFC1-209ENST00000504974 PTK2Q05397 1052 aa6.31□□□□□ -1.4
RFC1-209ENST00000504974 WWC1Q8IX03 1113 aa6.31□□□□□ -1.4
RFC1-209ENST00000504974 AGBL1Q96MI9 1066 aa6.31□□□□□ -1.4
RFC1-209ENST00000504974 GPR37L1O60883 481 aa6.3□□□□□ -1.4
RFC1-209ENST00000504974 WFS1O76024 890 aa6.3□□□□□ -1.4
RFC1-209ENST00000504974 INTS6LQ5JSJ4 861 aaKnown RBP6.3□□□□□ -1.4
RFC1-209ENST00000504974 CCDC116Q8IYX3 515 aa6.3□□□□□ -1.4
RFC1-209ENST00000504974 GPKOWQ92917 476 aaPredicted RBP eCLIP6.3□□□□□ -1.4
RFC1-209ENST00000504974 SLC10A4Q96EP9 437 aa6.3□□□□□ -1.4
RFC1-209ENST00000504974 TRAK2O60296 914 aa6.29□□□□□ -1.4
RFC1-209ENST00000504974 FBXO45P0C2W1 286 aa6.29□□□□□ -1.4
RFC1-209ENST00000504974 BMP2P12643 396 aa6.29□□□□□ -1.4
RFC1-209ENST00000504974 ZNF777Q9ULD5 760 aaPredicted RBP6.29□□□□□ -1.4
RFC1-209ENST00000504974 ZNF330Q9Y3S2 320 aaPredicted RBP6.29□□□□□ -1.4
RFC1-209ENST00000504974 MAP4K5Q9Y4K4 846 aa6.29□□□□□ -1.4
RFC1-209ENST00000504974 TERTO14746 1132 aaKnown RBP6.28□□□□□ -1.4
RFC1-209ENST00000504974 DZIP3Q86Y13 1208 aaKnown RBP6.28□□□□□ -1.4
RFC1-209ENST00000504974 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
RFC1-209ENST00000504974 KIFC2Q96AC6 838 aa6.28□□□□□ -1.4
RFC1-209ENST00000504974 ARID3AQ99856 593 aa6.28□□□□□ -1.4
RFC1-209ENST00000504974 FIGNL2A6NMB9 653 aa6.27□□□□□ -1.41
RFC1-209ENST00000504974 SOCS7O14512 581 aa6.27□□□□□ -1.41
RFC1-209ENST00000504974 GIGYF1O75420 1035 aaPredicted RBP6.27□□□□□ -1.41
RFC1-209ENST00000504974 ADD1P35611 737 aaKnown RBP6.27□□□□□ -1.41
RFC1-209ENST00000504974 SCARF1Q14162 830 aa6.27□□□□□ -1.41
RFC1-209ENST00000504974 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
RFC1-209ENST00000504974 PNMA1Q8ND90 353 aa6.27□□□□□ -1.41
RFC1-209ENST00000504974 PCDHB9Q9Y5E1 797 aa6.27□□□□□ -1.41
RFC1-209ENST00000504974 ZC3H4Q9UPT8 1303 aaKnown RBP6.26□□□□□ -1.41
RFC1-209ENST00000504974 ERVH48-1M5A8F1 160 aa6.26□□□□□ -1.41
RFC1-209ENST00000504974 RELBQ01201 579 aa6.26□□□□□ -1.41
RFC1-209ENST00000504974 ZNF784Q8NCA9 323 aaPredicted RBP6.26□□□□□ -1.41
RFC1-209ENST00000504974 ZNF395Q9H8N7 513 aaPredicted RBP6.26□□□□□ -1.41
RFC1-209ENST00000504974 DNMT3LQ9UJW3 386 aa6.26□□□□□ -1.41
RFC1-209ENST00000504974 EMILIN1Q9Y6C2 1016 aa6.26□□□□□ -1.41
RFC1-209ENST00000504974 ERBB4Q15303 1308 aa6.25□□□□□ -1.41
RFC1-209ENST00000504974 VAC14Q08AM6 782 aa6.25□□□□□ -1.41
RFC1-209ENST00000504974 FNBP4Q8N3X1 1017 aaPredicted RBP6.25□□□□□ -1.41
RFC1-209ENST00000504974 POM121CA8CG34 1229 aa6.24□□□□□ -1.41
RFC1-209ENST00000504974 ZBBXA8MT70 800 aa6.24□□□□□ -1.41
RFC1-209ENST00000504974 MAN1A2O60476 641 aa6.24□□□□□ -1.41
RFC1-209ENST00000504974 IRF5Q13568 498 aa6.24□□□□□ -1.41
RFC1-209ENST00000504974 KDF1Q8NAX2 398 aaPredicted RBP6.24□□□□□ -1.41
RFC1-209ENST00000504974 INSM2Q96T92 566 aaPredicted RBP6.24□□□□□ -1.41
RFC1-209ENST00000504974 CYLDQ9NQC7 956 aa6.24□□□□□ -1.41
RFC1-209ENST00000504974 NXF1Q9UBU9 619 aaKnown RBP6.24□□□□□ -1.41
RFC1-209ENST00000504974 GPSM3Q9Y4H4 160 aa6.24□□□□□ -1.41
RFC1-209ENST00000504974 SOS2Q07890 1332 aaPredicted RBP6.24□□□□□ -1.41
RFC1-209ENST00000504974 LILRA1O75019 489 aa6.23□□□□□ -1.41
RFC1-209ENST00000504974 CTSOP43234 321 aaPredicted RBP6.23□□□□□ -1.41
RFC1-209ENST00000504974 Q6ZVU0 165 aa6.23□□□□□ -1.41
RFC1-209ENST00000504974 C1orf115Q9H7X2 142 aa6.23□□□□□ -1.41
RFC1-209ENST00000504974 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
RFC1-209ENST00000504974 ESPNB1AK53 854 aa6.22□□□□□ -1.41
RFC1-209ENST00000504974 UPP2O95045 317 aa6.22□□□□□ -1.41
RFC1-209ENST00000504974 GMPRP36959 345 aa6.22□□□□□ -1.41
RFC1-209ENST00000504974 WASHC4Q2M389 1173 aa6.22□□□□□ -1.41
RFC1-209ENST00000504974 TTLL8A6PVC2 850 aa6.21□□□□□ -1.42
RFC1-209ENST00000504974 TSGA10IPQ3SY00 556 aa6.21□□□□□ -1.42
RFC1-209ENST00000504974 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.42
RFC1-209ENST00000504974 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
RFC1-209ENST00000504974 TSEN34Q9BSV6 310 aaKnown RBP6.21□□□□□ -1.42
RFC1-209ENST00000504974 H3BM21 787 aa6.2□□□□□ -1.42
RFC1-209ENST00000504974 SCTRP47872 440 aa6.2□□□□□ -1.42
RFC1-209ENST00000504974 NR1H3Q13133 447 aa6.2□□□□□ -1.42
RFC1-209ENST00000504974 NBPF20Q3BBV1 942 aa6.2□□□□□ -1.42
RFC1-209ENST00000504974 GLMNQ92990 594 aa6.2□□□□□ -1.42
RFC1-209ENST00000504974 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms