RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 OVOS2Q6IE36 1432 aa27.89■■■□□ 2.06
HERC6-205ENST00000504905 SPATA31A5Q5VU36 1347 aa27.89■■■□□ 2.05
HERC6-205ENST00000504905 SPATA31A7Q8IWB4 1347 aa27.89■■■□□ 2.05
HERC6-205ENST00000504905 NFAT5O94916 1531 aa27.88■■■□□ 2.05
HERC6-205ENST00000504905 PSDA5PKW4 1024 aaPredicted RBP27.87■■■□□ 2.05
HERC6-205ENST00000504905 COG3Q96JB2 828 aa27.87■■■□□ 2.05
HERC6-205ENST00000504905 LMO7Q8WWI1 1683 aa27.87■■■□□ 2.05
HERC6-205ENST00000504905 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
HERC6-205ENST00000504905 RGPD1P0DJD0 1748 aa27.86■■■□□ 2.05
HERC6-205ENST00000504905 FYB1O15117 783 aa27.84■■■□□ 2.05
HERC6-205ENST00000504905 PANK3Q9H999 370 aa27.84■■■□□ 2.05
HERC6-205ENST00000504905 THSD7AQ9UPZ6 1657 aa27.84■■■□□ 2.05
HERC6-205ENST00000504905 EN1Q05925 392 aaPredicted RBP27.83■■■□□ 2.05
HERC6-205ENST00000504905 ARHGEF25Q86VW2 580 aa27.83■■■□□ 2.05
HERC6-205ENST00000504905 GGNBP2Q9H3C7 697 aa27.83■■■□□ 2.05
HERC6-205ENST00000504905 CAMTA1Q9Y6Y1 1673 aa27.83■■■□□ 2.05
HERC6-205ENST00000504905 DISP2A7MBM2 1401 aa27.83■■■□□ 2.05
HERC6-205ENST00000504905 LTN1O94822 1766 aa27.82■■■□□ 2.04
HERC6-205ENST00000504905 AATKQ6ZMQ8 1374 aa27.82■■■□□ 2.04
HERC6-205ENST00000504905 CCDC7Q96M83 1385 aa27.82■■■□□ 2.04
HERC6-205ENST00000504905 COL18A1P39060 1754 aa27.81■■■□□ 2.04
HERC6-205ENST00000504905 FAM182BQ5T319 152 aa27.81■■■□□ 2.04
HERC6-205ENST00000504905 STRN4Q9NRL3 753 aa27.81■■■□□ 2.04
HERC6-205ENST00000504905 EVA1CP58658 441 aa27.8■■■□□ 2.04
HERC6-205ENST00000504905 CGNL1Q0VF96 1302 aa27.8■■■□□ 2.04
HERC6-205ENST00000504905 RGPD5Q99666 1765 aa27.78■■■□□ 2.04
HERC6-205ENST00000504905 WASHC2AQ641Q2 1341 aa27.78■■■□□ 2.04
HERC6-205ENST00000504905 TNS1Q9HBL0 1735 aaKnown RBP27.77■■■□□ 2.04
HERC6-205ENST00000504905 ABCC6O95255 1503 aa27.77■■■□□ 2.04
HERC6-205ENST00000504905 COL5A2P05997 1499 aaPredicted RBP27.76■■■□□ 2.04
HERC6-205ENST00000504905 SPATA31A1Q5TZJ5 1347 aa27.76■■■□□ 2.03
HERC6-205ENST00000504905 R3HDM1Q15032 1099 aaKnown RBP27.74■■■□□ 2.03
HERC6-205ENST00000504905 ANKRD26Q9UPS8 1709 aa27.74■■■□□ 2.03
HERC6-205ENST00000504905 AXIN2Q9Y2T1 843 aa27.73■■■□□ 2.03
HERC6-205ENST00000504905 FAM196AQ6ZSG2 479 aa27.72■■■□□ 2.03
HERC6-205ENST00000504905 EZH2Q15910 746 aaKnown RBP27.71■■■□□ 2.03
HERC6-205ENST00000504905 LARP1Q6PKG0 1096 aaKnown RBP27.71■■■□□ 2.03
HERC6-205ENST00000504905 CAMKK2Q96RR4 588 aa27.71■■■□□ 2.03
HERC6-205ENST00000504905 KNSTRNQ9Y448 316 aa27.71■■■□□ 2.03
HERC6-205ENST00000504905 FBLN1P23142 703 aa27.69■■■□□ 2.02
HERC6-205ENST00000504905 TRIM37O94972 964 aa27.68■■■□□ 2.02
HERC6-205ENST00000504905 NSD2O96028 1365 aa27.68■■■□□ 2.02
HERC6-205ENST00000504905 MAP3K19Q56UN5 1328 aa27.67■■■□□ 2.02
HERC6-205ENST00000504905 CRB1P82279 1406 aa27.67■■■□□ 2.02
HERC6-205ENST00000504905 USP35Q9P2H5 1018 aa27.67■■■□□ 2.02
HERC6-205ENST00000504905 PARD3Q8TEW0 1356 aa27.67■■■□□ 2.02
HERC6-205ENST00000504905 WDR17Q8IZU2 1322 aa27.67■■■□□ 2.02
HERC6-205ENST00000504905 CSB-PGBD3P0DP91 1061 aa27.66■■■□□ 2.02
HERC6-205ENST00000504905 AMPHP49418 695 aa27.66■■■□□ 2.02
HERC6-205ENST00000504905 RRS1Q15050 365 aaKnown RBP27.66■■■□□ 2.02
HERC6-205ENST00000504905 BARGINQ6ZT62 677 aa27.65■■■□□ 2.02
HERC6-205ENST00000504905 TOM1L2Q6ZVM7 507 aa27.65■■■□□ 2.02
HERC6-205ENST00000504905 IP6K1Q92551 441 aa27.65■■■□□ 2.02
HERC6-205ENST00000504905 APBA3O96018 575 aa27.63■■■□□ 2.01
HERC6-205ENST00000504905 TCP11L2Q8N4U5 519 aa27.63■■■□□ 2.01
HERC6-205ENST00000504905 MAP2P11137 1827 aaKnown RBP27.62■■■□□ 2.01
HERC6-205ENST00000504905 RTL1A6NKG5 1358 aa27.62■■■□□ 2.01
HERC6-205ENST00000504905 HOXC9P31274 260 aa27.61■■■□□ 2.01
HERC6-205ENST00000504905 THRAP3Q9Y2W1 955 aaKnown RBP27.61■■■□□ 2.01
HERC6-205ENST00000504905 ERBB3P21860 1342 aa27.61■■■□□ 2.01
HERC6-205ENST00000504905 PER1O15534 1290 aaPredicted RBP27.6■■■□□ 2.01
HERC6-205ENST00000504905 ANKRD24Q8TF21 1146 aa27.6■■■□□ 2.01
HERC6-205ENST00000504905 TNNT2P45379 298 aaPredicted RBP27.59■■■□□ 2.01
HERC6-205ENST00000504905 PDE3BQ13370 1112 aa27.59■■■□□ 2.01
HERC6-205ENST00000504905 AMER1Q5JTC6 1135 aaPredicted RBP27.59■■■□□ 2.01
HERC6-205ENST00000504905 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
HERC6-205ENST00000504905 PEAK1Q9H792 1746 aa27.58■■■□□ 2.01
HERC6-205ENST00000504905 FAM208AQ9UK61 1670 aaKnown RBP27.58■■■□□ 2.01
HERC6-205ENST00000504905 KIF24Q5T7B8 1368 aa27.58■■■□□ 2.01
HERC6-205ENST00000504905 RREB1Q92766 1687 aa27.57■■■□□ 2
HERC6-205ENST00000504905 LTV1Q96GA3 475 aaPredicted RBP27.57■■■□□ 2
HERC6-205ENST00000504905 CARD10Q9BWT7 1032 aa27.57■■■□□ 2
HERC6-205ENST00000504905 FLT4P35916 1363 aa27.57■■■□□ 2
HERC6-205ENST00000504905 EMILIN1Q9Y6C2 1016 aa27.56■■■□□ 2
HERC6-205ENST00000504905 WNK3Q9BYP7 1800 aa27.55■■■□□ 2
HERC6-205ENST00000504905 NLRP2Q9NX02 1062 aa27.55■■■□□ 2
HERC6-205ENST00000504905 PPM1GO15355 546 aaPredicted RBP27.54■■■□□ 2
HERC6-205ENST00000504905 NUP188Q5SRE5 1749 aa27.53■■■□□ 2
HERC6-205ENST00000504905 SMG6Q86US8 1419 aaKnown RBP27.52■■■□□ 2
HERC6-205ENST00000504905 INSRP06213 1382 aa27.52■■■□□ 2
HERC6-205ENST00000504905 CC2D1BQ5T0F9 858 aaKnown RBP27.52■■■□□ 2
HERC6-205ENST00000504905 POLKQ9UBT6 870 aa27.52■■■□□ 2
HERC6-205ENST00000504905 PARP4Q9UKK3 1724 aaKnown RBP27.52■■■□□ 2
HERC6-205ENST00000504905 HSP90AB2PQ58FF8 381 aa27.51■■□□□ 1.99
HERC6-205ENST00000504905 NBPF14Q5TI25 921 aa27.51■■□□□ 1.99
HERC6-205ENST00000504905 RGPD2P0DJD1 1756 aa27.5■■□□□ 1.99
HERC6-205ENST00000504905 NPC1L1Q9UHC9 1359 aa27.5■■□□□ 1.99
HERC6-205ENST00000504905 CDCA7Q9BWT1 371 aaPredicted RBP27.48■■□□□ 1.99
HERC6-205ENST00000504905 CNGB1Q14028 1251 aaPredicted RBP27.47■■□□□ 1.99
HERC6-205ENST00000504905 LRRC37A3O60309 1634 aa27.46■■□□□ 1.99
HERC6-205ENST00000504905 DDB1Q16531 1140 aa27.43■■□□□ 1.98
HERC6-205ENST00000504905 IL2RBP14784 551 aa27.41■■□□□ 1.98
HERC6-205ENST00000504905 NBPF6Q5VWK0 638 aa27.41■■□□□ 1.98
HERC6-205ENST00000504905 NBPF4Q96M43 638 aa27.41■■□□□ 1.98
HERC6-205ENST00000504905 SPON1Q9HCB6 807 aa27.41■■□□□ 1.98
HERC6-205ENST00000504905 OVOS2A0A0G2JMS6 1433 aa27.39■■□□□ 1.97
HERC6-205ENST00000504905 KCNQ2O43526 872 aa27.38■■□□□ 1.97
HERC6-205ENST00000504905 DDX10Q13206 875 aaKnown RBP27.38■■□□□ 1.97
HERC6-205ENST00000504905 RGPD3A6NKT7 1758 aaPredicted RBP27.37■■□□□ 1.97
HERC6-205ENST00000504905 RGPD4Q7Z3J3 1758 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms