RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PDGFDQ9GZP0 370 aaPredicted RBP10.04□□□□□ -0.8
NPIPB3-203ENST00000504841 SOX12O15370 315 aa10.03□□□□□ -0.8
NPIPB3-203ENST00000504841 NLRP6P59044 892 aa10.03□□□□□ -0.8
NPIPB3-203ENST00000504841 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
NPIPB3-203ENST00000504841 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
NPIPB3-203ENST00000504841 CASZ1Q86V15 1759 aa10.03□□□□□ -0.8
NPIPB3-203ENST00000504841 MYOM1P52179 1685 aa10.02□□□□□ -0.8
NPIPB3-203ENST00000504841 RGPD3A6NKT7 1758 aaPredicted RBP10.02□□□□□ -0.81
NPIPB3-203ENST00000504841 RGPD4Q7Z3J3 1758 aa10.02□□□□□ -0.81
NPIPB3-203ENST00000504841 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
NPIPB3-203ENST00000504841 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
NPIPB3-203ENST00000504841 SBF2Q86WG5 1849 aa10.02□□□□□ -0.81
NPIPB3-203ENST00000504841 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 USP6P35125 1406 aa10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 WNK3Q9BYP7 1800 aa10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 CSB-PGBD3P0DP91 1061 aa10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 U3KPZ7 1027 aaPredicted RBP10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 SLIT3O75094 1523 aa10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 CENPJQ9HC77 1338 aaPredicted RBP10.01□□□□□ -0.81
NPIPB3-203ENST00000504841 PLSCR1O15162 318 aa10□□□□□ -0.81
NPIPB3-203ENST00000504841 FOXD4L1Q9NU39 408 aa10□□□□□ -0.81
NPIPB3-203ENST00000504841 STK32BQ9NY57 414 aa10□□□□□ -0.81
NPIPB3-203ENST00000504841 CABP1Q9NZU7 370 aa10□□□□□ -0.81
NPIPB3-203ENST00000504841 AKAP12Q02952 1782 aa10□□□□□ -0.81
NPIPB3-203ENST00000504841 QRICH2Q9H0J4 1663 aa9.99□□□□□ -0.81
NPIPB3-203ENST00000504841 CPSF1Q10570 1443 aaKnown RBP9.99□□□□□ -0.81
NPIPB3-203ENST00000504841 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
NPIPB3-203ENST00000504841 MARCH10Q8NA82 808 aaPredicted RBP9.99□□□□□ -0.81
NPIPB3-203ENST00000504841 WDR17Q8IZU2 1322 aa9.99□□□□□ -0.81
NPIPB3-203ENST00000504841 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
NPIPB3-203ENST00000504841 PTGER2P43116 358 aa9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 TXNRD1Q16881 649 aa9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 PROM2Q8N271 834 aa9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 ZNF784Q8NCA9 323 aaPredicted RBP9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 FHDC1Q9C0D6 1143 aaPredicted RBP9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 AXIN2Q9Y2T1 843 aa9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
NPIPB3-203ENST00000504841 COL18A1P39060 1754 aa9.97□□□□□ -0.81
NPIPB3-203ENST00000504841 SENP3-EIF4A1A0A087X0R7 540 aa9.97□□□□□ -0.81
NPIPB3-203ENST00000504841 SLC15A2Q16348 729 aa9.96□□□□□ -0.82
NPIPB3-203ENST00000504841 ACSBG1Q96GR2 724 aa9.96□□□□□ -0.82
NPIPB3-203ENST00000504841 SYT17Q9BSW7 474 aa9.96□□□□□ -0.82
NPIPB3-203ENST00000504841 CDCA7Q9BWT1 371 aaPredicted RBP9.96□□□□□ -0.82
NPIPB3-203ENST00000504841 RGPD5Q99666 1765 aa9.96□□□□□ -0.82
NPIPB3-203ENST00000504841 EXOC5O00471 708 aa9.95□□□□□ -0.82
NPIPB3-203ENST00000504841 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
NPIPB3-203ENST00000504841 CARD10Q9BWT7 1032 aa9.95□□□□□ -0.82
NPIPB3-203ENST00000504841 MTFR1LQ9H019 292 aa9.95□□□□□ -0.82
NPIPB3-203ENST00000504841 TNS2Q63HR2 1409 aa9.95□□□□□ -0.82
NPIPB3-203ENST00000504841 BCL9O00512 1426 aa9.94□□□□□ -0.82
NPIPB3-203ENST00000504841 TTC21BQ7Z4L5 1316 aa9.94□□□□□ -0.82
NPIPB3-203ENST00000504841 EVC2Q86UK5 1308 aa9.94□□□□□ -0.82
NPIPB3-203ENST00000504841 ARHGEF25Q86VW2 580 aa9.94□□□□□ -0.82
NPIPB3-203ENST00000504841 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
NPIPB3-203ENST00000504841 CCDC7Q96M83 1385 aa9.93□□□□□ -0.82
NPIPB3-203ENST00000504841 ZBTB22O15209 634 aa9.93□□□□□ -0.82
NPIPB3-203ENST00000504841 PELP1Q8IZL8 1130 aaKnown RBP9.93□□□□□ -0.82
NPIPB3-203ENST00000504841 NHSQ6T4R5 1651 aa9.93□□□□□ -0.82
NPIPB3-203ENST00000504841 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
NPIPB3-203ENST00000504841 ARXQ96QS3 562 aa9.92□□□□□ -0.82
NPIPB3-203ENST00000504841 TRPM1Q7Z4N2 1603 aa9.92□□□□□ -0.82
NPIPB3-203ENST00000504841 NFAT5O94916 1531 aa9.92□□□□□ -0.82
NPIPB3-203ENST00000504841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.82
NPIPB3-203ENST00000504841 SGIP1Q9BQI5 828 aa9.91□□□□□ -0.82
NPIPB3-203ENST00000504841 NLRP2Q9NX02 1062 aa9.91□□□□□ -0.82
NPIPB3-203ENST00000504841 ABCC6O95255 1503 aa9.91□□□□□ -0.82
NPIPB3-203ENST00000504841 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 PAPPAQ13219 1627 aa9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 TTC21AQ8NDW8 1320 aa9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 C1QTNF8P60827 252 aa9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 GPR162Q16538 588 aa9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 ZNF827Q17R98 1081 aa9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 BTAF1O14981 1849 aa9.9□□□□□ -0.82
NPIPB3-203ENST00000504841 CHD4Q14839 1912 aa9.9□□□□□ -0.83
NPIPB3-203ENST00000504841 IL2RBP14784 551 aa9.89□□□□□ -0.83
NPIPB3-203ENST00000504841 ZNF692Q9BU19 519 aaPredicted RBP9.89□□□□□ -0.83
NPIPB3-203ENST00000504841 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
NPIPB3-203ENST00000504841 ERBB3P21860 1342 aa9.88□□□□□ -0.83
NPIPB3-203ENST00000504841 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
NPIPB3-203ENST00000504841 NME9Q86XW9 330 aa9.88□□□□□ -0.83
NPIPB3-203ENST00000504841 MON2Q7Z3U7 1717 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 KAT6BQ8WYB5 2073 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 POLD1P28340 1107 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 ANKRD24Q8TF21 1146 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 L3MBTL2Q969R5 705 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 LRRC4BQ9NT99 713 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 MAP3K5Q99683 1374 aa9.87□□□□□ -0.83
NPIPB3-203ENST00000504841 LTN1O94822 1766 aa9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 KCNQ4P56696 695 aa9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 SAMD1Q6SPF0 538 aaPredicted RBP9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 DDX54Q8TDD1 881 aaKnown RBP9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 SYTL4Q96C24 671 aaPredicted RBP9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 LTV1Q96GA3 475 aaPredicted RBP9.86□□□□□ -0.83
NPIPB3-203ENST00000504841 PNPLA7Q6ZV29 1317 aa9.84□□□□□ -0.83
NPIPB3-203ENST00000504841 NEUROD1Q13562 356 aa9.84□□□□□ -0.83
NPIPB3-203ENST00000504841 NLGN2Q8NFZ4 835 aa9.84□□□□□ -0.83
NPIPB3-203ENST00000504841 AKT1S1Q96B36 256 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms