RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
RNF4-206ENST00000504782 USP54Q70EL1 1684 aa18.14■□□□□ 0.49
RNF4-206ENST00000504782 SRCAPQ6ZRS2 3230 aa18.14■□□□□ 0.49
RNF4-206ENST00000504782 ST20-MTHFSA0A0A6YYL1 179 aa18.13■□□□□ 0.49
RNF4-206ENST00000504782 TESK2Q96S53 571 aa18.13■□□□□ 0.49
RNF4-206ENST00000504782 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
RNF4-206ENST00000504782 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
RNF4-206ENST00000504782 LTN1O94822 1766 aa18.12■□□□□ 0.49
RNF4-206ENST00000504782 TOM1L2Q6ZVM7 507 aa18.12■□□□□ 0.49
RNF4-206ENST00000504782 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
RNF4-206ENST00000504782 KCNH5Q8NCM2 988 aa18.11■□□□□ 0.49
RNF4-206ENST00000504782 CAMKK2Q96RR4 588 aa18.11■□□□□ 0.49
RNF4-206ENST00000504782 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
RNF4-206ENST00000504782 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
RNF4-206ENST00000504782 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
RNF4-206ENST00000504782 APBA3O96018 575 aa18.1■□□□□ 0.49
RNF4-206ENST00000504782 RREB1Q92766 1687 aa18.09■□□□□ 0.49
RNF4-206ENST00000504782 NUP188Q5SRE5 1749 aa18.07■□□□□ 0.48
RNF4-206ENST00000504782 PTF1AQ7RTS3 328 aa18.07■□□□□ 0.48
RNF4-206ENST00000504782 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
RNF4-206ENST00000504782 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
RNF4-206ENST00000504782 CSB-PGBD3P0DP91 1061 aa18.06■□□□□ 0.48
RNF4-206ENST00000504782 R3HDM1Q15032 1099 aaKnown RBP18.06■□□□□ 0.48
RNF4-206ENST00000504782 DDB1Q16531 1140 aa18.05■□□□□ 0.48
RNF4-206ENST00000504782 PUS7Q96PZ0 661 aaKnown RBP18.05■□□□□ 0.48
RNF4-206ENST00000504782 LRP5O75197 1615 aa18.05■□□□□ 0.48
RNF4-206ENST00000504782 MARCH10Q8NA82 808 aaPredicted RBP18.04■□□□□ 0.48
RNF4-206ENST00000504782 CARD10Q9BWT7 1032 aa18.04■□□□□ 0.48
RNF4-206ENST00000504782 TERF2IPQ9NYB0 399 aa18.04■□□□□ 0.48
RNF4-206ENST00000504782 OVOS2A0A0J9YW53 1432 aa18.04■□□□□ 0.48
RNF4-206ENST00000504782 OVOS2Q6IE36 1432 aa18.04■□□□□ 0.48
RNF4-206ENST00000504782 ABCC6O95255 1503 aa18.03■□□□□ 0.48
RNF4-206ENST00000504782 FBLN1P23142 703 aa18.03■□□□□ 0.48
RNF4-206ENST00000504782 OVOS2A0A0G2JMS6 1433 aa18.03■□□□□ 0.48
RNF4-206ENST00000504782 USP47Q96K76 1375 aa18.02■□□□□ 0.47
RNF4-206ENST00000504782 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
RNF4-206ENST00000504782 ERBB3P21860 1342 aa18■□□□□ 0.47
RNF4-206ENST00000504782 RGPD2P0DJD1 1756 aa17.99■□□□□ 0.47
RNF4-206ENST00000504782 ANKRD24Q8TF21 1146 aa17.98■□□□□ 0.47
RNF4-206ENST00000504782 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
RNF4-206ENST00000504782 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
RNF4-206ENST00000504782 CCDC7Q96M83 1385 aa17.98■□□□□ 0.47
RNF4-206ENST00000504782 NINLQ9Y2I6 1382 aa17.97■□□□□ 0.47
RNF4-206ENST00000504782 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
RNF4-206ENST00000504782 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
RNF4-206ENST00000504782 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
RNF4-206ENST00000504782 ANKRD36BQ8N2N9 1353 aa17.96■□□□□ 0.47
RNF4-206ENST00000504782 EXOC5O00471 708 aa17.96■□□□□ 0.47
RNF4-206ENST00000504782 MYOM1P52179 1685 aa17.96■□□□□ 0.47
RNF4-206ENST00000504782 TMF1P82094 1093 aa17.95■□□□□ 0.46
RNF4-206ENST00000504782 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
RNF4-206ENST00000504782 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
RNF4-206ENST00000504782 TNS2Q63HR2 1409 aa17.95■□□□□ 0.46
RNF4-206ENST00000504782 KCNQ2O43526 872 aa17.94■□□□□ 0.46
RNF4-206ENST00000504782 PROM2Q8N271 834 aa17.94■□□□□ 0.46
RNF4-206ENST00000504782 IP6K1Q92551 441 aa17.94■□□□□ 0.46
RNF4-206ENST00000504782 BCL9O00512 1426 aa17.94■□□□□ 0.46
RNF4-206ENST00000504782 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
RNF4-206ENST00000504782 KIF20BQ96Q89 1820 aa17.93■□□□□ 0.46
RNF4-206ENST00000504782 C11orf95C9JLR9 678 aaPredicted RBP17.93■□□□□ 0.46
RNF4-206ENST00000504782 FYB1O15117 783 aa17.93■□□□□ 0.46
RNF4-206ENST00000504782 COG3Q96JB2 828 aa17.93■□□□□ 0.46
RNF4-206ENST00000504782 GGNBP2Q9H3C7 697 aa17.93■□□□□ 0.46
RNF4-206ENST00000504782 PLSCR1O15162 318 aa17.92■□□□□ 0.46
RNF4-206ENST00000504782 NHSQ6T4R5 1651 aa17.91■□□□□ 0.46
RNF4-206ENST00000504782 FAM208AQ9UK61 1670 aaKnown RBP17.91■□□□□ 0.46
RNF4-206ENST00000504782 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
RNF4-206ENST00000504782 IL2RBP14784 551 aa17.91■□□□□ 0.46
RNF4-206ENST00000504782 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
RNF4-206ENST00000504782 ACSBG1Q96GR2 724 aa17.91■□□□□ 0.46
RNF4-206ENST00000504782 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
RNF4-206ENST00000504782 HOXC9P31274 260 aa17.9■□□□□ 0.46
RNF4-206ENST00000504782 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
RNF4-206ENST00000504782 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
RNF4-206ENST00000504782 KAT6BQ8WYB5 2073 aa17.88■□□□□ 0.45
RNF4-206ENST00000504782 AMPHP49418 695 aa17.88■□□□□ 0.45
RNF4-206ENST00000504782 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
RNF4-206ENST00000504782 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
RNF4-206ENST00000504782 SHANK3Q9BYB0 1731 aa17.88■□□□□ 0.45
RNF4-206ENST00000504782 BTAF1O14981 1849 aa17.88■□□□□ 0.45
RNF4-206ENST00000504782 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
RNF4-206ENST00000504782 CASZ1Q86V15 1759 aa17.86■□□□□ 0.45
RNF4-206ENST00000504782 TXNRD1Q16881 649 aa17.86■□□□□ 0.45
RNF4-206ENST00000504782 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
RNF4-206ENST00000504782 DDX54Q8TDD1 881 aaKnown RBP17.84■□□□□ 0.45
RNF4-206ENST00000504782 MEGF6O75095 1541 aa17.83■□□□□ 0.45
RNF4-206ENST00000504782 NSD3Q9BZ95 1437 aa17.83■□□□□ 0.45
RNF4-206ENST00000504782 CDCA8Q53HL2 280 aa17.83■□□□□ 0.44
RNF4-206ENST00000504782 NBPF6Q5VWK0 638 aa17.83■□□□□ 0.44
RNF4-206ENST00000504782 NBPF4Q96M43 638 aa17.83■□□□□ 0.44
RNF4-206ENST00000504782 DOT1LQ8TEK3 1739 aa17.82■□□□□ 0.44
RNF4-206ENST00000504782 HSP90AB2PQ58FF8 381 aa17.82■□□□□ 0.44
RNF4-206ENST00000504782 RTL1A6NKG5 1358 aa17.81■□□□□ 0.44
RNF4-206ENST00000504782 MAP2P11137 1827 aaKnown RBP17.8■□□□□ 0.44
RNF4-206ENST00000504782 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
RNF4-206ENST00000504782 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
RNF4-206ENST00000504782 PAPPAQ13219 1627 aa17.8■□□□□ 0.44
RNF4-206ENST00000504782 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
RNF4-206ENST00000504782 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
RNF4-206ENST00000504782 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms